Search results for the GEO ID: GSE12260  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM307986 | GPL1355 |
|
Control heart, biological rep1
|
rat heart
|
Wistar
isolated heart, Langendorff-perfused
|
Gene expression data from rat hearts perfused for 2 hours
|
| Sample_geo_accession | GSM307986
| | Sample_status | Public on Dec 31 2008
| | Sample_submission_date | Jul 28 2008
| | Sample_last_update_date | Jul 28 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Hearts from male Wistar rats (ca. 300 g) were perfused in a noncirculating Langendorff apparatus without (control; CO) or with 2 M doxorubicin (DO) during 2 hours.
| | Sample_growth_protocol_ch1 | n.a.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNAeasy Mini kit (Qiagen) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip® Rat Genome 230 2.0. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | Normalization and computation of expression values was performed using the Robust Multichip Average (RMA) algorithm.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Michael,,Zaugg
| | Sample_contact_email | michael.zaugg@usz.ch
| | Sample_contact_phone | +41-1-255 11 11
| | Sample_contact_laboratory | Perioperative Cardioprotection Research Group
| | Sample_contact_department | Anesthesiology
| | Sample_contact_institute | Anesthesiology, University Hospital Zurich
| | Sample_contact_address | Raemistrasse 100
| | Sample_contact_city | Zurich
| | Sample_contact_zip/postal_code | 8091
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307986/suppl/GSM307986.CEL.gz
| | Sample_series_id | GSE12260
| | Sample_data_row_count | 31099
| | |
|
GSM307987 | GPL1355 |
|
Control heart, biological rep2
|
rat heart
|
Wistar
isolated heart, Langendorff-perfused
|
Gene expression data from rat hearts perfused for 2 hours
|
| Sample_geo_accession | GSM307987
| | Sample_status | Public on Dec 31 2008
| | Sample_submission_date | Jul 28 2008
| | Sample_last_update_date | Jul 28 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Hearts from male Wistar rats (ca. 300 g) were perfused in a noncirculating Langendorff apparatus without (control; CO) or with 2 M doxorubicin (DO) during 2 hours.
| | Sample_growth_protocol_ch1 | n.a.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNAeasy Mini kit (Qiagen) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip® Rat Genome 230 2.0. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | Normalization and computation of expression values was performed using the Robust Multichip Average (RMA) algorithm.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Michael,,Zaugg
| | Sample_contact_email | michael.zaugg@usz.ch
| | Sample_contact_phone | +41-1-255 11 11
| | Sample_contact_laboratory | Perioperative Cardioprotection Research Group
| | Sample_contact_department | Anesthesiology
| | Sample_contact_institute | Anesthesiology, University Hospital Zurich
| | Sample_contact_address | Raemistrasse 100
| | Sample_contact_city | Zurich
| | Sample_contact_zip/postal_code | 8091
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307987/suppl/GSM307987.CEL.gz
| | Sample_series_id | GSE12260
| | Sample_data_row_count | 31099
| | |
|
GSM307988 | GPL1355 |
|
Control heart, biological rep3
|
rat heart
|
Wistar
isolated heart, Langendorff-perfused
|
Gene expression data from rat hearts perfused for 2 hours
|
| Sample_geo_accession | GSM307988
| | Sample_status | Public on Dec 31 2008
| | Sample_submission_date | Jul 28 2008
| | Sample_last_update_date | Jul 28 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Hearts from male Wistar rats (ca. 300 g) were perfused in a noncirculating Langendorff apparatus without (control; CO) or with 2 M doxorubicin (DO) during 2 hours.
| | Sample_growth_protocol_ch1 | n.a.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNAeasy Mini kit (Qiagen) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip® Rat Genome 230 2.0. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | Normalization and computation of expression values was performed using the Robust Multichip Average (RMA) algorithm.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Michael,,Zaugg
| | Sample_contact_email | michael.zaugg@usz.ch
| | Sample_contact_phone | +41-1-255 11 11
| | Sample_contact_laboratory | Perioperative Cardioprotection Research Group
| | Sample_contact_department | Anesthesiology
| | Sample_contact_institute | Anesthesiology, University Hospital Zurich
| | Sample_contact_address | Raemistrasse 100
| | Sample_contact_city | Zurich
| | Sample_contact_zip/postal_code | 8091
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307988/suppl/GSM307988.CEL.gz
| | Sample_series_id | GSE12260
| | Sample_data_row_count | 31099
| | |
|
GSM307989 | GPL1355 |
|
Control heart, biological rep4
|
rat heart
|
Wistar
isolated heart, Langendorff-perfused
|
Gene expression data from rat hearts perfused for 2 hours
|
| Sample_geo_accession | GSM307989
| | Sample_status | Public on Dec 31 2008
| | Sample_submission_date | Jul 28 2008
| | Sample_last_update_date | Jul 28 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Hearts from male Wistar rats (ca. 300 g) were perfused in a noncirculating Langendorff apparatus without (control; CO) or with 2 M doxorubicin (DO) during 2 hours.
| | Sample_growth_protocol_ch1 | n.a.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNAeasy Mini kit (Qiagen) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip® Rat Genome 230 2.0. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | Normalization and computation of expression values was performed using the Robust Multichip Average (RMA) algorithm.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Michael,,Zaugg
| | Sample_contact_email | michael.zaugg@usz.ch
| | Sample_contact_phone | +41-1-255 11 11
| | Sample_contact_laboratory | Perioperative Cardioprotection Research Group
| | Sample_contact_department | Anesthesiology
| | Sample_contact_institute | Anesthesiology, University Hospital Zurich
| | Sample_contact_address | Raemistrasse 100
| | Sample_contact_city | Zurich
| | Sample_contact_zip/postal_code | 8091
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307989/suppl/GSM307989.CEL.gz
| | Sample_series_id | GSE12260
| | Sample_data_row_count | 31099
| | |
|
GSM307990 | GPL1355 |
|
Doxo-treated heart, biological rep1
|
rat heart
|
Wistar
isolated heart, Langendorff-perfused
|
Gene expression data from rat hearts perfused for 2 hours with addition of 2uM doxorubicin
|
| Sample_geo_accession | GSM307990
| | Sample_status | Public on Dec 31 2008
| | Sample_submission_date | Jul 28 2008
| | Sample_last_update_date | Jul 28 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Hearts from male Wistar rats (ca. 300 g) were perfused in a noncirculating Langendorff apparatus without (control; CO) or with 2 M doxorubicin (DO) during 2 hours.
| | Sample_growth_protocol_ch1 | n.a.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNAeasy Mini kit (Qiagen) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip® Rat Genome 230 2.0. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | Normalization and computation of expression values was performed using the Robust Multichip Average (RMA) algorithm.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Michael,,Zaugg
| | Sample_contact_email | michael.zaugg@usz.ch
| | Sample_contact_phone | +41-1-255 11 11
| | Sample_contact_laboratory | Perioperative Cardioprotection Research Group
| | Sample_contact_department | Anesthesiology
| | Sample_contact_institute | Anesthesiology, University Hospital Zurich
| | Sample_contact_address | Raemistrasse 100
| | Sample_contact_city | Zurich
| | Sample_contact_zip/postal_code | 8091
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307990/suppl/GSM307990.CEL.gz
| | Sample_series_id | GSE12260
| | Sample_data_row_count | 31099
| | |
|
GSM307991 | GPL1355 |
|
Doxo-treated heart, biological rep2
|
rat heart
|
Wistar
isolated heart, Langendorff-perfused
|
Gene expression data from rat hearts perfused for 2 hours with addition of 2uM doxorubicin
|
| Sample_geo_accession | GSM307991
| | Sample_status | Public on Dec 31 2008
| | Sample_submission_date | Jul 28 2008
| | Sample_last_update_date | Jul 28 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Hearts from male Wistar rats (ca. 300 g) were perfused in a noncirculating Langendorff apparatus without (control; CO) or with 2 M doxorubicin (DO) during 2 hours.
| | Sample_growth_protocol_ch1 | n.a.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNAeasy Mini kit (Qiagen) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip® Rat Genome 230 2.0. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | Normalization and computation of expression values was performed using the Robust Multichip Average (RMA) algorithm.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Michael,,Zaugg
| | Sample_contact_email | michael.zaugg@usz.ch
| | Sample_contact_phone | +41-1-255 11 11
| | Sample_contact_laboratory | Perioperative Cardioprotection Research Group
| | Sample_contact_department | Anesthesiology
| | Sample_contact_institute | Anesthesiology, University Hospital Zurich
| | Sample_contact_address | Raemistrasse 100
| | Sample_contact_city | Zurich
| | Sample_contact_zip/postal_code | 8091
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307991/suppl/GSM307991.CEL.gz
| | Sample_series_id | GSE12260
| | Sample_data_row_count | 31099
| | |
|
GSM307992 | GPL1355 |
|
Doxo-treated heart, biological rep3
|
rat heart
|
Wistar
isolated heart, Langendorff-perfused
|
Gene expression data from rat hearts perfused for 2 hours with addition of 2uM doxorubicin
|
| Sample_geo_accession | GSM307992
| | Sample_status | Public on Dec 31 2008
| | Sample_submission_date | Jul 28 2008
| | Sample_last_update_date | Jul 28 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Hearts from male Wistar rats (ca. 300 g) were perfused in a noncirculating Langendorff apparatus without (control; CO) or with 2 M doxorubicin (DO) during 2 hours.
| | Sample_growth_protocol_ch1 | n.a.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNAeasy Mini kit (Qiagen) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip® Rat Genome 230 2.0. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | Normalization and computation of expression values was performed using the Robust Multichip Average (RMA) algorithm.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Michael,,Zaugg
| | Sample_contact_email | michael.zaugg@usz.ch
| | Sample_contact_phone | +41-1-255 11 11
| | Sample_contact_laboratory | Perioperative Cardioprotection Research Group
| | Sample_contact_department | Anesthesiology
| | Sample_contact_institute | Anesthesiology, University Hospital Zurich
| | Sample_contact_address | Raemistrasse 100
| | Sample_contact_city | Zurich
| | Sample_contact_zip/postal_code | 8091
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307992/suppl/GSM307992.CEL.gz
| | Sample_series_id | GSE12260
| | Sample_data_row_count | 31099
| | |
|
GSM307993 | GPL1355 |
|
Doxo-treated heart, biological rep4
|
rat heart
|
Wistar
isolated heart, Langendorff-perfused
|
Gene expression data from rat hearts perfused for 2 hours with addition of 2uM doxorubicin
|
| Sample_geo_accession | GSM307993
| | Sample_status | Public on Dec 31 2008
| | Sample_submission_date | Jul 28 2008
| | Sample_last_update_date | Jul 28 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Hearts from male Wistar rats (ca. 300 g) were perfused in a noncirculating Langendorff apparatus without (control; CO) or with 2 M doxorubicin (DO) during 2 hours.
| | Sample_growth_protocol_ch1 | n.a.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using RNAeasy Mini kit (Qiagen) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip® Rat Genome 230 2.0. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | Normalization and computation of expression values was performed using the Robust Multichip Average (RMA) algorithm.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Michael,,Zaugg
| | Sample_contact_email | michael.zaugg@usz.ch
| | Sample_contact_phone | +41-1-255 11 11
| | Sample_contact_laboratory | Perioperative Cardioprotection Research Group
| | Sample_contact_department | Anesthesiology
| | Sample_contact_institute | Anesthesiology, University Hospital Zurich
| | Sample_contact_address | Raemistrasse 100
| | Sample_contact_city | Zurich
| | Sample_contact_zip/postal_code | 8091
| | Sample_contact_country | Switzerland
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM307nnn/GSM307993/suppl/GSM307993.CEL.gz
| | Sample_series_id | GSE12260
| | Sample_data_row_count | 31099
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