Search results for the GEO ID: GSE12392 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM310386 | GPL1261 |
|
Spleen_WT_CD8_alphaminus denritic cells_rep1
|
C57BL/6 WT spleen CD8 alpha minus dendritic cells
|
Strain: C57BL/6
Gender: Female
Age: 10 weeks
Tissue: spleen
|
Strain: C57BL/6
Gender: Female
Age: 10 weeks
Tissue: spleen
|
Sample_geo_accession | GSM310386
| Sample_status | Public on Dec 01 2009
| Sample_submission_date | Aug 06 2008
| Sample_last_update_date | Apr 10 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | ethanol extraction followed by Qiagen RNeasy total RNA cleanup protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | standard Affymetrix procedures
| Sample_hyb_protocol | standard Affymetrix procedures
| Sample_scan_protocol | standard Affymetrix procedures
| Sample_data_processing | Data were normalized with quantile normalization. The expression values were computed using GC-RMA algorithm. All computations were performed with appropriate functions from the Affy package of the Bioconductor suite.
| Sample_platform_id | GPL1261
| Sample_contact_name | Jacek,,Puchałka
| Sample_contact_phone | 00498951607488
| Sample_contact_laboratory | Klein Lab
| Sample_contact_department | University Children's Hospital
| Sample_contact_institute | Munich University Hospital
| Sample_contact_address | Lindwurmstrasse 2a
| Sample_contact_city | Munich
| Sample_contact_zip/postal_code | 80337
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM310nnn/GSM310386/suppl/GSM310386.CEL.gz
| Sample_relation | Reanalyzed by: GSE45704
| Sample_series_id | GSE12392
| Sample_series_id | GSE17989
| Sample_data_row_count | 45101
| |
|
GSM310388 | GPL1261 |
|
Spleen_WT_CD8_alphaplus denritic cells_rep1
|
C57BL/6 WT spleen CD8 alpha plus dendritic cells
|
Strain: C57BL/6
Gender: Female
Age: 10 weeks
Tissue: spleen
|
Strain: C57BL/6
Gender: Female
Age: 10 weeks
Tissue: spleen
|
Sample_geo_accession | GSM310388
| Sample_status | Public on Dec 01 2009
| Sample_submission_date | Aug 06 2008
| Sample_last_update_date | Apr 10 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | ethanol extraction followed by Qiagen RNeasy total RNA cleanup protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | standard Affymetrix procedures
| Sample_hyb_protocol | standard Affymetrix procedures
| Sample_scan_protocol | standard Affymetrix procedures
| Sample_data_processing | Data were normalized with quantile normalization. The expression values were computed using GC-RMA algorithm. All computations were performed with appropriate functions from the Affy package of the Bioconductor suite.
| Sample_platform_id | GPL1261
| Sample_contact_name | Jacek,,Puchałka
| Sample_contact_phone | 00498951607488
| Sample_contact_laboratory | Klein Lab
| Sample_contact_department | University Children's Hospital
| Sample_contact_institute | Munich University Hospital
| Sample_contact_address | Lindwurmstrasse 2a
| Sample_contact_city | Munich
| Sample_contact_zip/postal_code | 80337
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM310nnn/GSM310388/suppl/GSM310388.CEL.gz
| Sample_relation | Reanalyzed by: GSE45704
| Sample_series_id | GSE12392
| Sample_series_id | GSE17989
| Sample_data_row_count | 45101
| |
|
GSM310390 | GPL1261 |
|
Spleen_WT_CD8_alphaminus denritic cells_rep2
|
C57BL/6 WT spleen CD8 alpha minus dendritic cells
|
Strain: C57BL/6
Gender: Female
Age: 10 weeks
Tissue: spleen
|
Strain: C57BL/6
Gender: Female
Age: 10 weeks
Tissue: spleen
|
Sample_geo_accession | GSM310390
| Sample_status | Public on Dec 01 2009
| Sample_submission_date | Aug 06 2008
| Sample_last_update_date | Apr 10 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | ethanol extraction followed by Qiagen RNeasy total RNA cleanup protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | standard Affymetrix procedures
| Sample_hyb_protocol | standard Affymetrix procedures
| Sample_scan_protocol | standard Affymetrix procedures
| Sample_data_processing | Data were normalized with quantile normalization. The expression values were computed using GC-RMA algorithm. All computations were performed with appropriate functions from the Affy package of the Bioconductor suite.
| Sample_platform_id | GPL1261
| Sample_contact_name | Jacek,,Puchałka
| Sample_contact_phone | 00498951607488
| Sample_contact_laboratory | Klein Lab
| Sample_contact_department | University Children's Hospital
| Sample_contact_institute | Munich University Hospital
| Sample_contact_address | Lindwurmstrasse 2a
| Sample_contact_city | Munich
| Sample_contact_zip/postal_code | 80337
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM310nnn/GSM310390/suppl/GSM310390.CEL.gz
| Sample_relation | Reanalyzed by: GSE45704
| Sample_series_id | GSE12392
| Sample_series_id | GSE17989
| Sample_data_row_count | 45101
| |
|
GSM310391 | GPL1261 |
|
Spleen_WT_CD8_alphaplus denritic cells_rep2
|
C57BL/6 WT spleen CD8 alpha plus dendritic cells
|
Strain: C57BL/6
Gender: Female
Age: 10 weeks
Tissue: spleen
|
Strain: C57BL/6
Gender: Female
Age: 10 weeks
Tissue: spleen
|
Sample_geo_accession | GSM310391
| Sample_status | Public on Dec 01 2009
| Sample_submission_date | Aug 06 2008
| Sample_last_update_date | Apr 10 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | ethanol extraction followed by Qiagen RNeasy total RNA cleanup protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | standard Affymetrix procedures
| Sample_hyb_protocol | standard Affymetrix procedures
| Sample_scan_protocol | standard Affymetrix procedures
| Sample_data_processing | Data were normalized with quantile normalization. The expression values were computed using GC-RMA algorithm. All computations were performed with appropriate functions from the Affy package of the Bioconductor suite.
| Sample_platform_id | GPL1261
| Sample_contact_name | Jacek,,Puchałka
| Sample_contact_phone | 00498951607488
| Sample_contact_laboratory | Klein Lab
| Sample_contact_department | University Children's Hospital
| Sample_contact_institute | Munich University Hospital
| Sample_contact_address | Lindwurmstrasse 2a
| Sample_contact_city | Munich
| Sample_contact_zip/postal_code | 80337
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM310nnn/GSM310391/suppl/GSM310391.CEL.gz
| Sample_relation | Reanalyzed by: GSE45704
| Sample_series_id | GSE12392
| Sample_series_id | GSE17989
| Sample_data_row_count | 45101
| |
|
GSM310392 | GPL1261 |
|
Spleen_IFNbeta_CD8_alphaminus denritic cells_rep1
|
C57BL/6 IFNbeta ko spleen CD8 alpha minus dendritic cells
|
Strain: C57BL/6 IFNbeta ko
Gender: Female
Age: 10 weeks
Tissue: spleen
|
Strain: C57BL/6
Gender: Female
Age: 10 weeks
Tissue: spleen
|
Sample_geo_accession | GSM310392
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Aug 06 2008
| Sample_last_update_date | Jul 07 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | ethanol extraction followed by Qiagen RNeasy total RNA cleanup protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | standard Affymetrix procedures
| Sample_hyb_protocol | standard Affymetrix procedures
| Sample_scan_protocol | standard Affymetrix procedures
| Sample_data_processing | Data were normalized with quantile normalization. The expression values were computed using GC-RMA algorithm. All computations were performed with appropriate functions from the Affy package of the Bioconductor suite.
| Sample_platform_id | GPL1261
| Sample_contact_name | Jacek,,Puchałka
| Sample_contact_phone | 00498951607488
| Sample_contact_laboratory | Klein Lab
| Sample_contact_department | University Children's Hospital
| Sample_contact_institute | Munich University Hospital
| Sample_contact_address | Lindwurmstrasse 2a
| Sample_contact_city | Munich
| Sample_contact_zip/postal_code | 80337
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM310nnn/GSM310392/suppl/GSM310392.CEL.gz
| Sample_series_id | GSE12392
| Sample_data_row_count | 45101
| |
|
GSM310393 | GPL1261 |
|
Spleen_IFNbeta_CD8_alphaplus denritic cells_rep1
|
C57BL/6 IFNbeta ko spleen CD8 alpha plus dendritic cells
|
Strain: C57BL/6 IFNbeta ko
Gender: Female
Age: 10 weeks
Tissue: spleen
|
Strain: C57BL/6
Gender: Female
Age: 10 weeks
Tissue: spleen
|
Sample_geo_accession | GSM310393
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Aug 06 2008
| Sample_last_update_date | Jul 07 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | ethanol extraction followed by Qiagen RNeasy total RNA cleanup protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | standard Affymetrix procedures
| Sample_hyb_protocol | standard Affymetrix procedures
| Sample_scan_protocol | standard Affymetrix procedures
| Sample_data_processing | Data were normalized with quantile normalization. The expression values were computed using GC-RMA algorithm. All computations were performed with appropriate functions from the Affy package of the Bioconductor suite.
| Sample_platform_id | GPL1261
| Sample_contact_name | Jacek,,Puchałka
| Sample_contact_phone | 00498951607488
| Sample_contact_laboratory | Klein Lab
| Sample_contact_department | University Children's Hospital
| Sample_contact_institute | Munich University Hospital
| Sample_contact_address | Lindwurmstrasse 2a
| Sample_contact_city | Munich
| Sample_contact_zip/postal_code | 80337
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM310nnn/GSM310393/suppl/GSM310393.CEL.gz
| Sample_series_id | GSE12392
| Sample_data_row_count | 45101
| |
|
GSM310394 | GPL1261 |
|
Spleen_IFNbeta_CD8_alphaminus denritic cells_rep2
|
C57BL/6 IFNbeta ko spleen CD8 alpha minus dendritic cells
|
Strain: C57BL/6 IFNbeta ko
Gender: Female
Age: 10 weeks
Tissue: spleen
|
Strain: C57BL/6
Gender: Female
Age: 10 weeks
Tissue: spleen
|
Sample_geo_accession | GSM310394
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Aug 06 2008
| Sample_last_update_date | Jul 07 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | ethanol extraction followed by Qiagen RNeasy total RNA cleanup protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | standard Affymetrix procedures
| Sample_hyb_protocol | standard Affymetrix procedures
| Sample_scan_protocol | standard Affymetrix procedures
| Sample_data_processing | Data were normalized with quantile normalization. The expression values were computed using GC-RMA algorithm. All computations were performed with appropriate functions from the Affy package of the Bioconductor suite.
| Sample_platform_id | GPL1261
| Sample_contact_name | Jacek,,Puchałka
| Sample_contact_phone | 00498951607488
| Sample_contact_laboratory | Klein Lab
| Sample_contact_department | University Children's Hospital
| Sample_contact_institute | Munich University Hospital
| Sample_contact_address | Lindwurmstrasse 2a
| Sample_contact_city | Munich
| Sample_contact_zip/postal_code | 80337
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM310nnn/GSM310394/suppl/GSM310394.CEL.gz
| Sample_series_id | GSE12392
| Sample_data_row_count | 45101
| |
|
GSM310396 | GPL1261 |
|
Spleen_IFNbeta_CD8_alphaplus denritic cells_rep2
|
C57BL/6 IFNbeta ko spleen CD8 alpha plus dendritic cells
|
Strain: C57BL/6 IFNbeta ko
Gender: Female
Age: 10 weeks
Tissue: spleen
|
Strain: C57BL/6
Gender: Female
Age: 10 weeks
Tissue: spleen
|
Sample_geo_accession | GSM310396
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Aug 06 2008
| Sample_last_update_date | Jul 07 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | ethanol extraction followed by Qiagen RNeasy total RNA cleanup protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | standard Affymetrix procedures
| Sample_hyb_protocol | standard Affymetrix procedures
| Sample_scan_protocol | standard Affymetrix procedures
| Sample_data_processing | Data were normalized with quantile normalization. The expression values were computed using GC-RMA algorithm. All computations were performed with appropriate functions from the Affy package of the Bioconductor suite.
| Sample_platform_id | GPL1261
| Sample_contact_name | Jacek,,Puchałka
| Sample_contact_phone | 00498951607488
| Sample_contact_laboratory | Klein Lab
| Sample_contact_department | University Children's Hospital
| Sample_contact_institute | Munich University Hospital
| Sample_contact_address | Lindwurmstrasse 2a
| Sample_contact_city | Munich
| Sample_contact_zip/postal_code | 80337
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM310nnn/GSM310396/suppl/GSM310396.CEL.gz
| Sample_series_id | GSE12392
| Sample_data_row_count | 45101
| |
|
GSM310397 | GPL1261 |
|
Spleen_IFNAR_CD8_alphaplus denritic cells_rep1
|
C57BL/6 IFNAR ko spleen CD8 alpha plus dendritic cells
|
Strain: C57BL/6 IFNAR ko
Gender: Female
Age: 10 weeks
Tissue: spleen
|
Strain: C57BL/6
Gender: Female
Age: 10 weeks
Tissue: spleen
|
Sample_geo_accession | GSM310397
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Aug 06 2008
| Sample_last_update_date | Jul 07 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | ethanol extraction followed by Qiagen RNeasy total RNA cleanup protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | standard Affymetrix procedures
| Sample_hyb_protocol | standard Affymetrix procedures
| Sample_scan_protocol | standard Affymetrix procedures
| Sample_data_processing | Data were normalized with quantile normalization. The expression values were computed using GC-RMA algorithm. All computations were performed with appropriate functions from the Affy package of the Bioconductor suite.
| Sample_platform_id | GPL1261
| Sample_contact_name | Jacek,,Puchałka
| Sample_contact_phone | 00498951607488
| Sample_contact_laboratory | Klein Lab
| Sample_contact_department | University Children's Hospital
| Sample_contact_institute | Munich University Hospital
| Sample_contact_address | Lindwurmstrasse 2a
| Sample_contact_city | Munich
| Sample_contact_zip/postal_code | 80337
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM310nnn/GSM310397/suppl/GSM310397.CEL.gz
| Sample_series_id | GSE12392
| Sample_data_row_count | 45101
| |
|
GSM310398 | GPL1261 |
|
Spleen_IFNAR_CD8_alphaminus denritic cells_rep1
|
C57BL/6 IFNAR ko spleen CD8 alpha minus dendritic cells
|
Strain: C57BL/6 IFNAR ko
Gender: Female
Age: 10 weeks
Tissue: spleen
|
Strain: C57BL/6
Gender: Female
Age: 10 weeks
Tissue: spleen
|
Sample_geo_accession | GSM310398
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Aug 06 2008
| Sample_last_update_date | Jul 07 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | ethanol extraction followed by Qiagen RNeasy total RNA cleanup protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | standard Affymetrix procedures
| Sample_hyb_protocol | standard Affymetrix procedures
| Sample_scan_protocol | standard Affymetrix procedures
| Sample_data_processing | Data were normalized with quantile normalization. The expression values were computed using GC-RMA algorithm. All computations were performed with appropriate functions from the Affy package of the Bioconductor suite.
| Sample_platform_id | GPL1261
| Sample_contact_name | Jacek,,Puchałka
| Sample_contact_phone | 00498951607488
| Sample_contact_laboratory | Klein Lab
| Sample_contact_department | University Children's Hospital
| Sample_contact_institute | Munich University Hospital
| Sample_contact_address | Lindwurmstrasse 2a
| Sample_contact_city | Munich
| Sample_contact_zip/postal_code | 80337
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM310nnn/GSM310398/suppl/GSM310398.CEL.gz
| Sample_series_id | GSE12392
| Sample_data_row_count | 45101
| |
|
GSM310399 | GPL1261 |
|
Spleen_IFNAR_CD8_alphaminus denritic cells_rep2
|
C57BL/6 IFNAR ko spleen CD8 alpha minus dendritic cells
|
Strain: C57BL/6 IFNAR ko
Gender: Female
Age: 10 weeks
Tissue: spleen
|
Strain: C57BL/6
Gender: Female
Age: 10 weeks
Tissue: spleen
|
Sample_geo_accession | GSM310399
| Sample_status | Public on Jul 07 2009
| Sample_submission_date | Aug 06 2008
| Sample_last_update_date | Jul 07 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | ethanol extraction followed by Qiagen RNeasy total RNA cleanup protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | standard Affymetrix procedures
| Sample_hyb_protocol | standard Affymetrix procedures
| Sample_scan_protocol | standard Affymetrix procedures
| Sample_data_processing | Data were normalized with quantile normalization. The expression values were computed using GC-RMA algorithm. All computations were performed with appropriate functions from the Affy package of the Bioconductor suite.
| Sample_platform_id | GPL1261
| Sample_contact_name | Jacek,,Puchałka
| Sample_contact_phone | 00498951607488
| Sample_contact_laboratory | Klein Lab
| Sample_contact_department | University Children's Hospital
| Sample_contact_institute | Munich University Hospital
| Sample_contact_address | Lindwurmstrasse 2a
| Sample_contact_city | Munich
| Sample_contact_zip/postal_code | 80337
| Sample_contact_country | Germany
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM310nnn/GSM310399/suppl/GSM310399.CEL.gz
| Sample_series_id | GSE12392
| Sample_data_row_count | 45101
| |
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