Search results for the GEO ID: GSE12438  |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM312323 | GPL571 |
|
Luciferase KD, No R1881, rep1
|
LNCaP Cells
|
n/a
|
none
|
|
|
GSM312324 | GPL571 |
|
Luciferase KD, No R1881, rep2
|
LNCaP Cells
|
n/a
|
none
|
|
|
GSM312325 | GPL571 |
|
Luciferase KD, 1nM R1881, rep1
|
LNCaP Cells
|
n/a
|
none
|
|
|
GSM312326 | GPL571 |
|
Luciferase KD, 1nM R1881, rep2
|
LNCaP Cells
|
n/a
|
none
|
|
|
GSM312327 | GPL571 |
|
HDAC1 KD, No R1881, rep1
|
LNCaP Cells
|
n/a
|
none
|
|
|
GSM312328 | GPL571 |
|
HDAC1 KD, No R1881, rep2
|
LNCaP Cells
|
n/a
|
none
|
|
|
GSM312329 | GPL571 |
|
HDAC1 KD, 1nM R1881, rep1
|
LNCaP Cells
|
n/a
|
none
|
|
|
GSM312330 | GPL571 |
|
HDAC1 KD, 1nM R1881, rep2
|
LNCaP Cells
|
n/a
|
none
|
|
|
GSM312331 | GPL571 |
|
HDAC2 KD, No R1881, rep1
|
LNCaP Cells
|
n/a
|
none
|
|
|
GSM312332 | GPL571 |
|
HDAC2 KD, No R1881, rep2
|
LNCaP Cells
|
n/a
|
none
|
|
|
GSM312333 | GPL571 |
|
HDAC2 KD, 1nM R1881, rep1
|
LNCaP Cells
|
n/a
|
none
|
|
|
GSM312334 | GPL571 |
|
HDAC2 KD, 1nM R1881, rep2
|
LNCaP Cells
|
n/a
|
none
|
|
|
GSM312335 | GPL571 |
|
HDAC3 KD, No R1881, rep1
|
LNCaP Cells
|
n/a
|
none
|
|
|
GSM312336 | GPL571 |
|
HDAC3 KD, No R1881, rep2
|
LNCaP Cells
|
n/a
|
none
|
|
|
GSM312337 | GPL571 |
|
HDAC3 KD, 1nM R1881, rep1
|
LNCaP Cells
|
n/a
|
none
|
|
|
GSM312338 | GPL571 |
|
HDAC3 KD, 1nM R1881, rep2
|
LNCaP Cells
|
n/a
|
none
|
|
|
GSM312339 | GPL571 |
|
HDAC8 KD, No R1881, rep1
|
LNCaP Cells
|
n/a
|
none
|
|
|
GSM312340 | GPL571 |
|
HDAC8 KD, No R1881, rep2
|
LNCaP Cells
|
n/a
|
none
|
|
|
GSM312341 | GPL571 |
|
HDAC8 KD, 1nM R1881, rep1
|
LNCaP Cells
|
n/a
|
none
|
|
|
GSM312342 | GPL571 |
|
HDAC8 KD, 1nM R1881, rep2
|
LNCaP Cells
|
n/a
|
none
|
|
|
| |
| |
Make groups for comparisons |
(2 groups will be compared at a time) |
|
| Select GSMs and click on "Add groups" |
Enter the group name here: |
|
|
|
Select expression type |
| Transcripts profile based on; |
A. Differential status (Up/Down regulation) |
|
|
Regulation type |
|
Fold change |
|
p-value |
|
|
|
B. Absolute calls (Transcribed/Not-detected) |
|
|
| Derive calls within/across groups |
Within groups |
|
|
Detection status |
|
Percentage detection |
|
|
Across groups |
|
|
Detection status |
First group: |
- |
Second group:
|
Percentage detection |
First group: |
- |
Second group:
|
|
|
| |
Filter results by number of probes |
|
|
