Search results for the GEO ID: GSE12510 |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM314308 | GPL570 |
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Human Umbilical Cord lining Epithelial cells
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Human Umbilical Cord lining Epithelial cells
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Human Umbilical Cord lining Epithelial cells ID #33
Gender : Female
Karyotype: 46 XX, Normal
In vitro Passage Number : 15
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Transcriptome dataset of human umbilical cord lining epithelial cells.
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Sample_geo_accession | GSM314308
| Sample_status | Public on Aug 23 2008
| Sample_submission_date | Aug 21 2008
| Sample_last_update_date | Aug 22 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | CellResearch Corporation, Singapore
| Sample_treatment_protocol_ch1 | No Treatment
| Sample_growth_protocol_ch1 | Establised primary cultures were cultured in pTTE1 (provided by CellResearch Corporation) medium.
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted using Triazol reagent according to manufacturer's protocol.
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared from 8 microg total RNA using the IVT labelling kit (Affymetrix).
| Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized to the Affymetrix HG-U133A chip according to the protocols provided by the manufacturer.
| Sample_scan_protocol | GeneChips were scanned using the Genecip scanner 3000 7G.
| Sample_data_processing | The data were condensed with MAS 5.0 using the Affymetrix software using default settings. The normalization target was set to 500.
| Sample_platform_id | GPL570
| Sample_contact_name | Jaichandran,,Sivalingam
| Sample_contact_email | dmsjss@nccs.com.sg
| Sample_contact_laboratory | Laboratory of Applied Human Genetics
| Sample_contact_department | Division of Medical Sciences
| Sample_contact_institute | National Cancer Center
| Sample_contact_address | 11 Hospital Drive
| Sample_contact_city | Singapore
| Sample_contact_zip/postal_code | 169610
| Sample_contact_country | Singapore
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM314nnn/GSM314308/suppl/GSM314308.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM314nnn/GSM314308/suppl/GSM314308.CHP.gz
| Sample_series_id | GSE12510
| Sample_data_row_count | 54675
| |
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GSM314309 | GPL570 |
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GFP integrated Human Umbilical Cord lining Epithelial cells
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Human Umbilical Cord lining Epithelial cells
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Human Umbilical Cord lining Epithelial cells ID #33
Integrated with EGFP cDNA using Phage Integrase
Gender : Female
Karyotype: 46 XX, Normal
In vitro Passage Number : 15
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Transcriptome dataset of human umbilical cord lining epithelial cells with EGFP integration.
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Sample_geo_accession | GSM314309
| Sample_status | Public on Aug 23 2008
| Sample_submission_date | Aug 21 2008
| Sample_last_update_date | Aug 22 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | CellResearch Corporation, Singapore
| Sample_treatment_protocol_ch1 | EGFP cDNA integrated into genomic DNA using phage integrase.
| Sample_growth_protocol_ch1 | Establised primary cultures were cultured in pTTE1 (provided by CellResearch Corporation) medium.
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was extracted using Triazol reagent according to manufacturer's protocol.
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared from 8 microg total RNA using the IVT labelling kit (Affymetrix).
| Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized to the Affymetrix HG-U133A chip according to the protocols provided by the manufacturer.
| Sample_scan_protocol | GeneChips were scanned using the Genecip scanner 3000 7G.
| Sample_data_processing | The data were condensed with MAS 5.0 using the Affymetrix software using default settings. The normalization target was set to 500.
| Sample_platform_id | GPL570
| Sample_contact_name | Jaichandran,,Sivalingam
| Sample_contact_email | dmsjss@nccs.com.sg
| Sample_contact_laboratory | Laboratory of Applied Human Genetics
| Sample_contact_department | Division of Medical Sciences
| Sample_contact_institute | National Cancer Center
| Sample_contact_address | 11 Hospital Drive
| Sample_contact_city | Singapore
| Sample_contact_zip/postal_code | 169610
| Sample_contact_country | Singapore
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM314nnn/GSM314309/suppl/GSM314309.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM314nnn/GSM314309/suppl/GSM314309.CHP.gz
| Sample_series_id | GSE12510
| Sample_data_row_count | 54675
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