Search results for the GEO ID: GSE12630 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM319663 | GPL96 |
|
M06_0202U1A
|
Ovary
|
Anatomical sites: Ovary
gender: F
age: 50-59
TNM: 3 to 4
|
Clear Cell Carcinoma of the Ovary
|
Sample_geo_accession | GSM319663
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319663/suppl/GSM319663.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319664 | GPL96 |
|
M06_0203U1A
|
Ovary
|
Anatomical sites: Ovary
gender: F
age: 60-69
TNM: 4
|
Poorly Differentiated Serous Carcinoma of Ovary
|
Sample_geo_accession | GSM319664
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319664/suppl/GSM319664.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319665 | GPL96 |
|
M06_0204U1A
|
Breast
|
Anatomical sites: Breast
gender: F
age: 50-59
TNM: 4
|
Invasive Ductal Carcinoma
|
Sample_geo_accession | GSM319665
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319665/suppl/GSM319665.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319666 | GPL96 |
|
M06_0205U1A
|
Ovary
|
Anatomical sites: Ovary
gender: F
age: 50-59
TNM: 4
|
High Grade Serous Carcinoma of Ovary
|
Sample_geo_accession | GSM319666
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319666/suppl/GSM319666.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319667 | GPL96 |
|
M06_0208U1A
|
Breast
|
Anatomical sites: Breast
gender: F
age: 50-59
TNM: 4
|
Invasive Ductal Carcinoma
|
Sample_geo_accession | GSM319667
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319667/suppl/GSM319667.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319668 | GPL96 |
|
M06_0222U1A
|
Breast
|
Anatomical sites: Breast
gender: F
age: 60-69
TNM: 4
|
Invasive Ductal Carcinoma
|
Sample_geo_accession | GSM319668
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319668/suppl/GSM319668.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319669 | GPL96 |
|
J06_0258U1A
|
Lung
|
Anatomical sites: Lung
gender: M
age: 50-59
TNM: 4
|
Invasive poorly differentiated adenosquamous cell carcinoma
|
Sample_geo_accession | GSM319669
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319669/suppl/GSM319669.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319670 | GPL96 |
|
J06_0259U1A
|
Breast
|
Anatomical sites: Ovary
gender: F
age: 40-49
TNM: -
|
Metastatic adenocarcinoma consistent with breast primary
|
Sample_geo_accession | GSM319670
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319670/suppl/GSM319670.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319671 | GPL96 |
|
J06_0261U1A
|
Lung
|
Anatomical sites: Lymph node
gender: F
age: 50-59
TNM: -
|
Poorly differentiated non-small cell carcinoma
|
Sample_geo_accession | GSM319671
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319671/suppl/GSM319671.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319672 | GPL96 |
|
J06_0262U1A
|
Colorectal
|
Anatomical sites: Colon
gender: F
age: 60-69
TNM: 3 to 4
|
Invasive moderately to poorly differentiated adenocarcinoma of colon mucinous differentiation
|
Sample_geo_accession | GSM319672
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319672/suppl/GSM319672.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319673 | GPL96 |
|
J06_0272U1A
|
Lymph Node
|
Anatomical sites: Thigh mass
gender: F
age: 70-79
TNM: -
|
Malignant lymphoma
|
Sample_geo_accession | GSM319673
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319673/suppl/GSM319673.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319674 | GPL96 |
|
J06_0274U1A
|
Lung
|
Anatomical sites: Adrenal gland
gender: F
age: 50-59
TNM: -
|
Metastatic poorly differentiated carcinoma
|
Sample_geo_accession | GSM319674
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319674/suppl/GSM319674.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319675 | GPL96 |
|
J06_0276U1A
|
Lymph Node
|
Anatomical sites: Thyroid
gender: F
age: 80-89
TNM: -
|
Malignant lymphoma of B-cell type w/ low and intermediate grade components
|
Sample_geo_accession | GSM319675
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319675/suppl/GSM319675.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319676 | GPL96 |
|
J06_0278U1A
|
Colorectal
|
Anatomical sites: Stomach
gender: M
age: 50-59
TNM: -
|
Moderately differentiated adenocarcinoma with infiltrating gastric mucosa
|
Sample_geo_accession | GSM319676
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319676/suppl/GSM319676.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319677 | GPL96 |
|
J06_0260U1A
|
Colorectal
|
Anatomical sites: Colon
gender: F
age: 70-79
TNM: 3 to 4
|
Moderate to poorly differentiated adenocarcinoma extending into the subserosal fat
|
Sample_geo_accession | GSM319677
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319677/suppl/GSM319677.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319678 | GPL96 |
|
J06_0269U1A
|
Breast
|
Anatomical sites: Liver
gender: F
age: 60-69
TNM: -
|
Metastatic carcinoma consistent with metastasis from the breast
|
Sample_geo_accession | GSM319678
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319678/suppl/GSM319678.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319679 | GPL96 |
|
J06_0270U1A
|
Lung
|
Anatomical sites: Adrenal gland
gender: F
age: 60-69
TNM: -
|
Metastatic moderately differentiated adenocarcinoma
|
Sample_geo_accession | GSM319679
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319679/suppl/GSM319679.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319680 | GPL96 |
|
J06_0271U1A
|
Lymph Node
|
Anatomical sites: Lymph node
gender: M
age: 60-69
TNM: 3 to 4
|
Malignant neoplasm
|
Sample_geo_accession | GSM319680
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319680/suppl/GSM319680.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319681 | GPL96 |
|
J06_0273U1A
|
Lung
|
Anatomical sites: Adrenal gland
gender: M
age: 70-79
TNM: -
|
Poorly differentiated lung adenocarcinoma
|
Sample_geo_accession | GSM319681
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319681/suppl/GSM319681.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319682 | GPL96 |
|
J06_0275U1A
|
Pancreas
|
Anatomical sites: Pancreas
gender: F
age: 60-69
TNM: 4
|
Pancreatic adenosquamous carcinoma
|
Sample_geo_accession | GSM319682
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319682/suppl/GSM319682.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319683 | GPL96 |
|
J06_0320U1A
|
Colorectal
|
Anatomical sites: Omentum
gender: F
age: 40-49
TNM: -
|
Invasive
|
Sample_geo_accession | GSM319683
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319683/suppl/GSM319683.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319684 | GPL96 |
|
J06_0356U1A
|
Lung
|
Anatomical sites: Lung
gender: F
age: 60-69
TNM: 3 to 4
|
Invasive pleomorphic carcinoma w/adenocarcinoma and spindle cell carcinoma
|
Sample_geo_accession | GSM319684
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319684/suppl/GSM319684.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319685 | GPL96 |
|
J06_0360U1A
|
Colorectal
|
Anatomical sites: Lung
gender: M
age: 70-79
TNM: -
|
Metastatic Colorectal Adenocarcinoma
|
Sample_geo_accession | GSM319685
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319685/suppl/GSM319685.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319686 | GPL96 |
|
J06_0338U1A
|
Pancreas
|
Anatomical sites: Pancreas
gender: M
age: 60-69
TNM: 3
|
Moderately to poorly differentiated pancreatic adenocarcinoma arising in head of pancreas
|
Sample_geo_accession | GSM319686
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319686/suppl/GSM319686.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319687 | GPL96 |
|
J06_0339U1A
|
Breast
|
Anatomical sites: Liver
gender: F
age: 60-69
TNM: -
|
Moderately diff. adenocarcinoma consistent w/ metastatic ductal adenocarcinoma of breast
|
Sample_geo_accession | GSM319687
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319687/suppl/GSM319687.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319688 | GPL96 |
|
J06_0343U1A
|
Pancreas
|
Anatomical sites: Pancreas
gender: F
age: 70-79
TNM: 3
|
Moderately to poorly diff. pancreatic adenocarcinoma of head of pancreas
|
Sample_geo_accession | GSM319688
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319688/suppl/GSM319688.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319689 | GPL96 |
|
J06_0347U1A
|
Pancreas
|
Anatomical sites: Pancreas/Duod.
gender: F
age: 70-79
TNM: 3
|
Moderately to poorly diff. mucinous adenocarcinoma w/signet ring cell features
|
Sample_geo_accession | GSM319689
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319689/suppl/GSM319689.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319690 | GPL96 |
|
J06_0349U1A
|
Lymph Node
|
Anatomical sites: Spleen/soft tissue
gender: F
age: 60-69
TNM: -
|
Diffuse large B-cell Lymphoma
|
Sample_geo_accession | GSM319690
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319690/suppl/GSM319690.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319691 | GPL96 |
|
J06_0344U1A
|
Breast
|
Anatomical sites: Lymph node
gender: F
age: 50-59
TNM: -
|
Metastatic carcinoma
|
Sample_geo_accession | GSM319691
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319691/suppl/GSM319691.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319692 | GPL96 |
|
H03_0223U2H
|
Colorectal
|
Anatomical sites: Lymph node
gender: F
age: 70-79
TNM: -
|
Adenocarcinoma of colon
|
Sample_geo_accession | GSM319692
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319692/suppl/GSM319692.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319693 | GPL96 |
|
H03_0237U2H
|
Pancreas
|
Anatomical sites: Lymph node
gender: F
age: 70-79
TNM: -
|
Adenocarcinoma of pancreas
|
Sample_geo_accession | GSM319693
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319693/suppl/GSM319693.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319694 | GPL96 |
|
H03_1001U2H
|
Pancreas
|
Anatomical sites: Omentum
gender: F
age: 50-59
TNM: -
|
Adenocarcinoma of pancreas
|
Sample_geo_accession | GSM319694
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319694/suppl/GSM319694.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319695 | GPL96 |
|
H03_1160U2H
|
Lymph Node
|
Anatomical sites: Thyroid gland
gender: M
age: 20-29
TNM: -
|
Lymphoma
|
Sample_geo_accession | GSM319695
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319695/suppl/GSM319695.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319696 | GPL96 |
|
H03_5083U2H
|
Lymph Node
|
Anatomical sites: Lung
gender: F
age: 70-79
TNM: -
|
Lymphoma
|
Sample_geo_accession | GSM319696
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319696/suppl/GSM319696.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319697 | GPL96 |
|
H03_5096U2H
|
Colorectal
|
Anatomical sites: Lung
gender: M
age: 80-89
TNM: -
|
Adenocarcinoma of colon
|
Sample_geo_accession | GSM319697
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319697/suppl/GSM319697.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319698 | GPL96 |
|
H03_5289U2H
|
Colorectal
|
Anatomical sites: Liver
gender: M
age: 70-79
TNM: G2
|
Adenocarcinoma of colon
|
Sample_geo_accession | GSM319698
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319698/suppl/GSM319698.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319699 | GPL96 |
|
H03_5971U2H
|
Lung
|
Anatomical sites: Lymph node
gender: M
age: 70-79
TNM: -
|
Carcinoma of lung
|
Sample_geo_accession | GSM319699
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319699/suppl/GSM319699.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319700 | GPL96 |
|
H03_6111U2H
|
Lung
|
Anatomical sites: Skin
gender: F
age: 60-69
TNM: G3
|
Carcinoma of lung
|
Sample_geo_accession | GSM319700
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319700/suppl/GSM319700.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319701 | GPL96 |
|
H03_6153U2H
|
Lymph Node
|
Anatomical sites: Lymph node
gender: F
age: 60-69
TNM: WHO grade 1
|
Lymphoma
|
Sample_geo_accession | GSM319701
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319701/suppl/GSM319701.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319702 | GPL96 |
|
H03_7975U2H
|
Breast
|
Anatomical sites: Ovary
gender: F
age: 40-49
TNM: -
|
Adenocarcinoma of breast
|
Sample_geo_accession | GSM319702
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319702/suppl/GSM319702.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319703 | GPL96 |
|
H03_1243U2H
|
Breast
|
Anatomical sites: Lymph node
gender: F
age: 60-69
TNM: -
|
Adenocarcinoma of breast
|
Sample_geo_accession | GSM319703
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319703/suppl/GSM319703.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319704 | GPL96 |
|
H03_1490U2H
|
Breast
|
Anatomical sites: Lung
gender: F
age: 40-49
TNM: -
|
Adenocarcinoma of breast
|
Sample_geo_accession | GSM319704
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319704/suppl/GSM319704.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319705 | GPL96 |
|
H03_5005U2H
|
Lung
|
Anatomical sites: Small intestine
gender: M
age: 60-69
TNM: -
|
Carcinoma of lung
|
Sample_geo_accession | GSM319705
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319705/suppl/GSM319705.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319706 | GPL96 |
|
P08_1117U3H
|
Thyroid
|
Anatomical sites: Lymph node
gender: F
age: 30-39
TNM: -
|
papillary carcinoma
|
Sample_geo_accession | GSM319706
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319706/suppl/GSM319706.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319707 | GPL96 |
|
P08_1119U3H
|
Thyroid
|
Anatomical sites: Lymph node
gender: F
age: 50-59
TNM: -
|
medullary carcinoma
|
Sample_geo_accession | GSM319707
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319707/suppl/GSM319707.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319708 | GPL96 |
|
P08_1120U3H
|
Thyroid
|
Anatomical sites: Lymph node
gender: M
age: 20-29
TNM: -
|
papillary carcinoma follicular variant
|
Sample_geo_accession | GSM319708
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319708/suppl/GSM319708.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319709 | GPL96 |
|
P08_8175U3H
|
Gastric
|
Anatomical sites: Lymph node
gender: M
age: 30-39
TNM: -
|
adenocarcinoma moderately to poorly differentiated
|
Sample_geo_accession | GSM319709
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319709/suppl/GSM319709.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319710 | GPL96 |
|
P08_8195U3H
|
Gastric
|
Anatomical sites: Lymph node
gender: M
age: 50-59
TNM: -
|
adenocarcinoma moderately to poorly differentiated
|
Sample_geo_accession | GSM319710
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319710/suppl/GSM319710.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319711 | GPL96 |
|
P08_8200U3H
|
Gastric
|
Anatomical sites: Lymph node
gender: M
age: 50-59
TNM: -
|
adenocarcinoma poorly differentiated
|
Sample_geo_accession | GSM319711
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319711/suppl/GSM319711.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319712 | GPL96 |
|
P08_8208U3H
|
Gastric
|
Anatomical sites: Lymph node
gender: M
age: 70-79
TNM: -
|
adenocarcinoma moderately to poorly differentiated
|
Sample_geo_accession | GSM319712
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319712/suppl/GSM319712.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319713 | GPL96 |
|
P07_0420U3H
|
Kidney
|
Anatomical sites: Adrenal gland
gender: M
age: 60-69
TNM: -
|
Carcinoma of kidney
|
Sample_geo_accession | GSM319713
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319713/suppl/GSM319713.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319714 | GPL96 |
|
P07_1680U3H
|
Kidney
|
Anatomical sites: Lung
gender: M
age: 50-59
TNM: -
|
Carcinoma of kidney
|
Sample_geo_accession | GSM319714
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319714/suppl/GSM319714.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319715 | GPL96 |
|
P07_1759U3H
|
Liver
|
Anatomical sites: Liver
gender: M
age: 60-69
TNM: G3
|
Carcinoma of liver
|
Sample_geo_accession | GSM319715
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319715/suppl/GSM319715.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319716 | GPL96 |
|
P07_6525U3H
|
Kidney
|
Anatomical sites: Liver
gender: F
age: 70-79
TNM: Fuhrman G3
|
Carcinoma of kidney
|
Sample_geo_accession | GSM319716
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319716/suppl/GSM319716.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319717 | GPL96 |
|
P07_8275U3H
|
Liver
|
Anatomical sites: Liver
gender: M
age: 40-49
TNM: G3
|
Carcinoma of liver
|
Sample_geo_accession | GSM319717
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319717/suppl/GSM319717.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319718 | GPL96 |
|
P06_0291U3H
|
Skin
|
Anatomical sites: Lung
gender: M
age: 60-69
TNM: -
|
Metastatic malignant melanoma
|
Sample_geo_accession | GSM319718
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319718/suppl/GSM319718.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319719 | GPL96 |
|
P06_0336U2H
|
Bladder
|
Anatomical sites: Lung
gender: F
age: 60-69
TNM: -
|
Metastatic urothelial carcinoma
|
Sample_geo_accession | GSM319719
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319719/suppl/GSM319719.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319720 | GPL96 |
|
P06_0348U2H
|
Lymph Node
|
Anatomical sites: Small bowel
gender: M
age: 80-89
TNM: -
|
Malignant lymphoma
|
Sample_geo_accession | GSM319720
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319720/suppl/GSM319720.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319721 | GPL96 |
|
P06_0350U2H
|
Skin
|
Anatomical sites: Small Bowel
gender: F
age: 40-49
TNM: -
|
Metastatic malignant melanoma
|
Sample_geo_accession | GSM319721
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319721/suppl/GSM319721.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319722 | GPL96 |
|
P06_0354U2H
|
Lymph Node
|
Anatomical sites: Spleen
gender: M
age: 80-89
TNM: -
|
Malignant lymphoma
|
Sample_geo_accession | GSM319722
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319722/suppl/GSM319722.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319723 | GPL96 |
|
P06_0355U2H
|
Pancreas
|
Anatomical sites: Stomach/Duod/Pancreas
gender: M
age: 80-89
TNM: -
|
Invasive moderately diff. ductal adenocarcinoma of the head of the pancreas
|
Sample_geo_accession | GSM319723
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319723/suppl/GSM319723.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319724 | GPL96 |
|
P06_0357U2H
|
Lung
|
Anatomical sites: Lung
gender: F
age: 70-79
TNM: 4
|
Poorly differentiated adenocarcinoma
|
Sample_geo_accession | GSM319724
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319724/suppl/GSM319724.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319725 | GPL96 |
|
P06_0374U2H
|
Ovary
|
Anatomical sites: Colon
gender: M
age: 70-79
TNM: -
|
Poorly differentiated adenocarcinoma compatible w/ ovarian primary serous papillary type
|
Sample_geo_accession | GSM319725
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319725/suppl/GSM319725.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319726 | GPL96 |
|
P06_0375U2H
|
Ovary
|
Anatomical sites: Colon
gender: M
age: 70-79
TNM: -
|
Poorly differentiated serous papillary adenocarcinoma
|
Sample_geo_accession | GSM319726
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319726/suppl/GSM319726.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319727 | GPL96 |
|
P06_0376U2H
|
Soft Tissue
|
Anatomical sites: Adominal sarcoma
gender: F
age: 70-79
TNM: 3 to 4
|
Recurrent high grade sarcoma involving mesenteric fat and focally muscle of small bowel
|
Sample_geo_accession | GSM319727
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319727/suppl/GSM319727.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319728 | GPL96 |
|
P06_0379U2H
|
Kidney
|
Anatomical sites: Kidney
gender: F
age: 80-89
TNM: 3 to 4
|
Renal cell carcinoma
|
Sample_geo_accession | GSM319728
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319728/suppl/GSM319728.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319729 | GPL96 |
|
P06_0381U2H
|
Soft Tissue
|
Anatomical sites: Soft Tissue
gender: F
age: 50-59
TNM: 4
|
High grade sarcoma (pleomorphic liposarcoma)
|
Sample_geo_accession | GSM319729
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319729/suppl/GSM319729.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319730 | GPL96 |
|
P06_0383U1H
|
Thyroid
|
Anatomical sites: Thyroid
gender: M
age: 30-39
TNM: -
|
Poorly diff. papillary adenocarcinoma confined to the thyroid gland
|
Sample_geo_accession | GSM319730
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319730/suppl/GSM319730.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319731 | GPL96 |
|
P06_0392U1H
|
Germ Cell
|
Anatomical sites: Testicle
gender: M
age: 10-19
TNM: -
|
Mixed germ cell tumor composed of embryonal carcinoma (70%)
|
Sample_geo_accession | GSM319731
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319731/suppl/GSM319731.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319732 | GPL96 |
|
P06_0393U1H
|
Germ Cell
|
Anatomical sites: Testicle
gender: M
age: 20-29
TNM: -
|
Testicular germ cell tumor consisting only of embryonal carcinoma
|
Sample_geo_accession | GSM319732
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319732/suppl/GSM319732.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319733 | GPL96 |
|
P06_0402U2H
|
Germ Cell
|
Anatomical sites: Lymph node
gender: M
age: 30-39
TNM: -
|
Mixed germ cell carcinoma composed of embryonal carcinoma
|
Sample_geo_accession | GSM319733
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319733/suppl/GSM319733.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319734 | GPL96 |
|
P06_0405U2H
|
Kidney
|
Anatomical sites: Adrenal Gland
gender: M
age: 60-69
TNM: -
|
Clear cell carcinoma consistent with metastatic renal cell carcinoma
|
Sample_geo_accession | GSM319734
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319734/suppl/GSM319734.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319735 | GPL96 |
|
P06_0406U2H
|
Gastric
|
Anatomical sites: Stomach
gender: M
age: 80-89
TNM: 4
|
Invasive poorly differentiated gastric adenocarcinoma
|
Sample_geo_accession | GSM319735
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319735/suppl/GSM319735.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319736 | GPL96 |
|
P06_0410U2H
|
Liver
|
Anatomical sites: Liver
gender: M
age: 50-59
TNM: 2 to 3
|
Multifocal moderately to poorly diff. hepatocellular carcinoma
|
Sample_geo_accession | GSM319736
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319736/suppl/GSM319736.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319737 | GPL96 |
|
P06_0411U2H
|
Thyroid
|
Anatomical sites: Lymph Node
gender: F
age: 40-49
TNM: -
|
Metastatic papillary carcinoma of the thyroid
|
Sample_geo_accession | GSM319737
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319737/suppl/GSM319737.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319738 | GPL96 |
|
P06_0416U2H
|
Skin
|
Anatomical sites: Lung
gender: F
age: 50-59
TNM: -
|
Metastatic melanoma
|
Sample_geo_accession | GSM319738
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319738/suppl/GSM319738.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319739 | GPL96 |
|
P06_0418U2H
|
Lung
|
Anatomical sites: Adrenal gland
gender: M
age: 50-59
TNM: -
|
Metastatic lung adenocarcinoma
|
Sample_geo_accession | GSM319739
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319739/suppl/GSM319739.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319740 | GPL96 |
|
P06_0422U2H
|
Ovary
|
Anatomical sites: Umbilical nodule
gender: M
age: 70-79
TNM: -
|
Metastatic adenocarcinoma
|
Sample_geo_accession | GSM319740
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319740/suppl/GSM319740.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319741 | GPL96 |
|
P06_0424U2H
|
Breast
|
Anatomical sites: Breast
gender: M
age: 70-79
TNM: 4
|
Infiltrating ductal carcinoma
|
Sample_geo_accession | GSM319741
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319741/suppl/GSM319741.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319742 | GPL96 |
|
P06_0427U2H
|
Thyroid
|
Anatomical sites: Thyroid
gender: F
age: 60-69
TNM: -
|
Medullary thyroid carcinoma w/ focal c-cell hyperplasia
|
Sample_geo_accession | GSM319742
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319742/suppl/GSM319742.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319743 | GPL96 |
|
P07_0144U3H
|
Skin
|
Anatomical sites: Lung
gender: M
age: 40-49
TNM: -
|
Malignant melanoma
|
Sample_geo_accession | GSM319743
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319743/suppl/GSM319743.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319744 | GPL96 |
|
P07_0213U3H
|
Skin
|
Anatomical sites: Small intestine
gender: M
age: 70-79
TNM: -
|
Malignant melanoma
|
Sample_geo_accession | GSM319744
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319744/suppl/GSM319744.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319745 | GPL96 |
|
P07_0322U3H
|
Skin
|
Anatomical sites: Lung
gender: M
age: 40-49
TNM: -
|
Malignant melanoma
|
Sample_geo_accession | GSM319745
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319745/suppl/GSM319745.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319746 | GPL96 |
|
P07_0543U3H
|
Skin
|
Anatomical sites: Liver
gender: M
age: 50-59
TNM: -
|
Malignant melanoma
|
Sample_geo_accession | GSM319746
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319746/suppl/GSM319746.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319747 | GPL96 |
|
P07_0698U3H
|
Skin
|
Anatomical sites: Jejunum
gender: M
age: 40-49
TNM: -
|
Malignant melanoma
|
Sample_geo_accession | GSM319747
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319747/suppl/GSM319747.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319748 | GPL96 |
|
P07_0748U3H
|
Skin
|
Anatomical sites: Lung
gender: M
age: 50-59
TNM: -
|
Malignant melanoma
|
Sample_geo_accession | GSM319748
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319748/suppl/GSM319748.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319749 | GPL96 |
|
P07_0876U3H
|
Skin
|
Anatomical sites: Omentum
gender: F
age: 60-69
TNM: -
|
Malignant melanoma
|
Sample_geo_accession | GSM319749
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319749/suppl/GSM319749.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319750 | GPL96 |
|
P07_1141U3H
|
Gastric
|
Anatomical sites: Ovary
gender: F
age: 80-86
TNM: -
|
Adenocarcinoma of stomach
|
Sample_geo_accession | GSM319750
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319750/suppl/GSM319750.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319751 | GPL96 |
|
P07_1260U3H
|
Skin
|
Anatomical sites: Small intestine
gender: M
age: 50-59
TNM: -
|
Malignant melanoma
|
Sample_geo_accession | GSM319751
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319751/suppl/GSM319751.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319752 | GPL96 |
|
P07_1279U3H
|
Bladder
|
Anatomical sites: Lymph node
gender: M
age: 70-79
TNM: G3
|
Carcinoma of bladder
|
Sample_geo_accession | GSM319752
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319752/suppl/GSM319752.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319753 | GPL96 |
|
P07_9399U3H
|
Thyroid
|
Anatomical sites: Lung
gender: M
age: 80-89
TNM: -
|
Carcinoma of thyroid
|
Sample_geo_accession | GSM319753
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319753/suppl/GSM319753.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319754 | GPL96 |
|
P07_0011U3H
|
Lymph Node
|
Anatomical sites: Stomach
gender: M
age: 70-79
TNM: -
|
Lymphoma
|
Sample_geo_accession | GSM319754
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319754/suppl/GSM319754.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319755 | GPL96 |
|
P07_0043U3H
|
Kidney
|
Anatomical sites: Lung
gender: M
age: 40-49
TNM: -
|
Carcinoma of kidney
|
Sample_geo_accession | GSM319755
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319755/suppl/GSM319755.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319756 | GPL96 |
|
P07_0045U3H
|
Lymph Node
|
Anatomical sites: Spleen
gender: M
age: 50-59
TNM: -
|
Lymphoma
|
Sample_geo_accession | GSM319756
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319756/suppl/GSM319756.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319757 | GPL96 |
|
P07_0100U3H
|
Skin
|
Anatomical sites: Small intestine
gender: M
age: 30-39
TNM: -
|
Malignant melanoma
|
Sample_geo_accession | GSM319757
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319757/suppl/GSM319757.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319758 | GPL96 |
|
P07_0162U3H
|
Kidney
|
Anatomical sites: Lung
gender: M
age: 50-59
TNM: Fuhrman G3
|
Carcinoma of kidney
|
Sample_geo_accession | GSM319758
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319758/suppl/GSM319758.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319759 | GPL96 |
|
P07_0164U3H
|
Lymph Node
|
Anatomical sites: Spleen
gender: F
age: 60-69
TNM: -
|
Lymphoma
|
Sample_geo_accession | GSM319759
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319759/suppl/GSM319759.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319760 | GPL96 |
|
P07_0584U3H
|
Lymph Node
|
Anatomical sites: Lung
gender: F
age: 70-79
TNM: WHO grade 1
|
Lymphoma
|
Sample_geo_accession | GSM319760
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319760/suppl/GSM319760.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319761 | GPL96 |
|
P07_1165U3H
|
Kidney
|
Anatomical sites: Lymph node
gender: F
age: 40-49
TNM: Fuhrman G4
|
Carcinoma of kidney
|
Sample_geo_accession | GSM319761
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319761/suppl/GSM319761.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319762 | GPL96 |
|
P07_1625U3H
|
Lymph Node
|
Anatomical sites: Spleen
gender: F
age: 60-69
TNM: -
|
Lymphoma
|
Sample_geo_accession | GSM319762
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319762/suppl/GSM319762.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319763 | GPL96 |
|
P07_5107U3H
|
Lymph Node
|
Anatomical sites: Spleen
gender: M
age: 60-69
TNM: -
|
Lymphoma
|
Sample_geo_accession | GSM319763
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319763/suppl/GSM319763.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319764 | GPL96 |
|
P07_5235U3H
|
Lymph Node
|
Anatomical sites: Neck
gender: -
age: 60-69
TNM: -
|
Lymphoma
|
Sample_geo_accession | GSM319764
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319764/suppl/GSM319764.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319765 | GPL96 |
|
P07_5334U3H
|
Lymph Node
|
Anatomical sites: lleum
gender: -
age: 80-89
TNM: -
|
Lymphoma
|
Sample_geo_accession | GSM319765
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319765/suppl/GSM319765.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319766 | GPL96 |
|
P07_5382U3H
|
Lymph Node
|
Anatomical sites: Groin
gender: M
age: 30-39
TNM: -
|
Lymphoma
|
Sample_geo_accession | GSM319766
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319766/suppl/GSM319766.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319767 | GPL96 |
|
P07_5522U3H
|
Lymph Node
|
Anatomical sites: Small intestine
gender: F
age: 50-59
TNM: WHO grade II
|
Lymphoma
|
Sample_geo_accession | GSM319767
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319767/suppl/GSM319767.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319768 | GPL96 |
|
P07_5564U3H
|
Lymph Node
|
Anatomical sites: Groin
gender: M
age: 60-69
TNM: -
|
Lymphoma
|
Sample_geo_accession | GSM319768
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319768/suppl/GSM319768.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319769 | GPL96 |
|
P07_5669U3H
|
Lymph Node
|
Anatomical sites: Thyroid gland
gender: F
age: 60-69
TNM: -
|
Lymphoma
|
Sample_geo_accession | GSM319769
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319769/suppl/GSM319769.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319770 | GPL96 |
|
P07_5765U3H
|
Lymph Node
|
Anatomical sites: Testis
gender: M
age: 50-59
TNM: -
|
Lymphoma
|
Sample_geo_accession | GSM319770
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319770/suppl/GSM319770.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319771 | GPL96 |
|
P07_9585U3H
|
Kidney
|
Anatomical sites: Lung
gender: M
age: 50-59
TNM: -
|
Carcinoma of kidney
|
Sample_geo_accession | GSM319771
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319771/suppl/GSM319771.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319772 | GPL96 |
|
M06_0340U1A
|
Skin
|
Anatomical sites: Skin
gender: F
age: 80-89
TNM: -
|
Metastatic malignant melanoma
|
Sample_geo_accession | GSM319772
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319772/suppl/GSM319772.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319773 | GPL96 |
|
P08_1670U4H
|
Gastric
|
Anatomical sites: Ovary
gender: F
age: 50-59
TNM: -
|
adenocarcinoma moderately to poorly differentiated
|
Sample_geo_accession | GSM319773
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319773/suppl/GSM319773.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319774 | GPL96 |
|
P08_1970U4H
|
Gastric
|
Anatomical sites: Gastric
gender: M
age: 50-59
TNM: 4
|
adenocarcinoma poorly differentiated
|
Sample_geo_accession | GSM319774
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319774/suppl/GSM319774.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319775 | GPL96 |
|
P08_2002U4H
|
Gastric
|
Anatomical sites: Gastric
gender: M
age: 50-59
TNM: 4
|
adenocarcinoma poorly differentiated
|
Sample_geo_accession | GSM319775
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319775/suppl/GSM319775.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319776 | GPL96 |
|
P08_2180U4H
|
Gastric
|
Anatomical sites: Gastric
gender: M
age: 50-59
TNM: 4
|
adenocarcinoma poorly differentiated
|
Sample_geo_accession | GSM319776
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319776/suppl/GSM319776.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319777 | GPL96 |
|
P08_1020U4H
|
Gastric
|
Anatomical sites: Ovary
gender: F
age: 40-49
TNM: -
|
signet ring carcinoma
|
Sample_geo_accession | GSM319777
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319777/suppl/GSM319777.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319778 | GPL96 |
|
P07_9333U4H
|
Liver
|
Anatomical sites: Lymph node
gender: M
age: 20-29
TNM: -
|
Carcinoma
|
Sample_geo_accession | GSM319778
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319778/suppl/GSM319778.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319779 | GPL96 |
|
P07_0191U5H
|
Germ Cell
|
Anatomical sites: Testis
gender: M
age: 20-29
TNM: -
|
Tumor of testis
|
Sample_geo_accession | GSM319779
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319779/suppl/GSM319779.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319780 | GPL96 |
|
P07_0353U5H
|
Prostate
|
Anatomical sites: Prostate
gender: M
age: 60-69
7/10
|
Adenocarcinoma of prostate
|
Sample_geo_accession | GSM319780
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319780/suppl/GSM319780.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319781 | GPL96 |
|
P07_0386U4H
|
Pancreas
|
Anatomical sites: Pancreas
gender: F
age: 60-69
TNM: G3
|
Adenocarcinoma of pancreas
|
Sample_geo_accession | GSM319781
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319781/suppl/GSM319781.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319782 | GPL96 |
|
P07_0463U5H
|
Prostate
|
Anatomical sites: Prostate
gender: M
age: 50-59
7/10
|
Adenocarcinoma of prostate
|
Sample_geo_accession | GSM319782
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319782/suppl/GSM319782.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319783 | GPL96 |
|
P07_1300U4H
|
Liver
|
Anatomical sites: Omentum
gender: M
age: 70-79
TNM: G3
|
Carcinoma of liver
|
Sample_geo_accession | GSM319783
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319783/suppl/GSM319783.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319784 | GPL96 |
|
P07_1307U4H
|
Pancreas
|
Anatomical sites: Pancreas
gender: F
age: 70-79
TNM: G4
|
Tumor of pancreas
|
Sample_geo_accession | GSM319784
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319784/suppl/GSM319784.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319785 | GPL96 |
|
P07_1473U4H
|
Lung
|
Anatomical sites: Lymph node
gender: F
age: 70-79
TNM: G3
|
Carcinoma of lung
|
Sample_geo_accession | GSM319785
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319785/suppl/GSM319785.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319786 | GPL96 |
|
P07_1480U4H
|
Lung
|
Anatomical sites: Lymph node
gender: M
age: 60-69
TNM: G3
|
Carcinoma of Lung
|
Sample_geo_accession | GSM319786
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319786/suppl/GSM319786.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319787 | GPL96 |
|
P07_1714U4H
|
Pancreas
|
Anatomical sites: Pancreas
gender: M
age: 60-69
TNM: G3-4
|
Carcinoma of pancreas
|
Sample_geo_accession | GSM319787
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319787/suppl/GSM319787.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319788 | GPL96 |
|
P07_1861U5H
|
Germ Cell
|
Anatomical sites: Testis
gender: M
age: 30-39
TNM: -
|
Tumor of testis
|
Sample_geo_accession | GSM319788
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319788/suppl/GSM319788.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319789 | GPL96 |
|
P07_2118U5H
|
Prostate
|
Anatomical sites: Prostate
gender: M
age: 60-69
7/10
|
Adenocarcinoma of prostate
|
Sample_geo_accession | GSM319789
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319789/suppl/GSM319789.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319790 | GPL96 |
|
P07_5002U4H
|
Lung
|
Anatomical sites: Omentum
gender: F
age: 30-39
TNM: G2
|
Adenocarcinoma of lung
|
Sample_geo_accession | GSM319790
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319790/suppl/GSM319790.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319791 | GPL96 |
|
P07_5248U5H
|
Prostate
|
Anatomical sites: Prostate
gender: M
age: 50-59
6/10
|
Adenocarcinoma of prostate
|
Sample_geo_accession | GSM319791
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319791/suppl/GSM319791.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319792 | GPL96 |
|
P07_5253U5H
|
Prostate
|
Anatomical sites: Prostate
gender: M
age: 50-59
7/10
|
Adenocarcinoma of prostate
|
Sample_geo_accession | GSM319792
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319792/suppl/GSM319792.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319793 | GPL96 |
|
P07_5377U4H
|
Pancreas
|
Anatomical sites: Pancreas
gender: F
age: 70-79
TNM: G3
|
Adenocarcinoma of pancreas
|
Sample_geo_accession | GSM319793
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319793/suppl/GSM319793.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319794 | GPL96 |
|
P07_5828U5H
|
Germ Cell
|
Anatomical sites: Testis
gender: M
age: 10-19
TNM: -
|
Tumor of testis
|
Sample_geo_accession | GSM319794
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319794/suppl/GSM319794.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319795 | GPL96 |
|
P07_8520U5H
|
Prostate
|
Anatomical sites: Prostate
gender: M
age: 50-59
6/10
|
Adenocarcinoma of prostate
|
Sample_geo_accession | GSM319795
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319795/suppl/GSM319795.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319796 | GPL96 |
|
P07_0132U4H
|
Thyroid
|
Anatomical sites: Lymph node
gender: M
age: 50-59
TNM: -
|
Carcinoma of thyroid
|
Sample_geo_accession | GSM319796
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319796/suppl/GSM319796.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319797 | GPL96 |
|
P07_0401U4H
|
Pancreas
|
Anatomical sites: Pancreas
gender: M
age: 70-79
TNM: G3
|
Adenocarcinoma of pancreas
|
Sample_geo_accession | GSM319797
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319797/suppl/GSM319797.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319798 | GPL96 |
|
P07_0824U4H
|
Germ Cell
|
Anatomical sites: Testis
gender: M
age: 30-39
TNM: -
|
Tumor of testis
|
Sample_geo_accession | GSM319798
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319798/suppl/GSM319798.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319799 | GPL96 |
|
P07_1213U4H
|
Liver
|
Anatomical sites: Liver
gender: M
age: 60-69
TNM: G3
|
Carcinoma of liver
|
Sample_geo_accession | GSM319799
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319799/suppl/GSM319799.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319800 | GPL96 |
|
P07_1222U4H
|
Germ Cell
|
Anatomical sites: Testis
gender: M
age: 30-39
TNM: -
|
Tumor of testis
|
Sample_geo_accession | GSM319800
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319800/suppl/GSM319800.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319801 | GPL96 |
|
P07_1484U4H
|
Germ Cell
|
Anatomical sites: Testis
gender: M
age: 20-29
TNM: -
|
Tumor of testis
|
Sample_geo_accession | GSM319801
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319801/suppl/GSM319801.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319802 | GPL96 |
|
P07_1627U4H
|
Germ Cell
|
Anatomical sites: Testis
gender: M
age: 30-39
TNM: -
|
Tumor of testis
|
Sample_geo_accession | GSM319802
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319802/suppl/GSM319802.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319803 | GPL96 |
|
P07_1879U4H
|
Germ Cell
|
Anatomical sites: Testis
gender: M
age: 40-49
TNM: -
|
Tumor of testis
|
Sample_geo_accession | GSM319803
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319803/suppl/GSM319803.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319804 | GPL96 |
|
P07_6029U4H
|
Germ Cell
|
Anatomical sites: Testis
gender: M
age: 20-29
TNM: -
|
Tumor of testis
|
Sample_geo_accession | GSM319804
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319804/suppl/GSM319804.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319805 | GPL96 |
|
P07_6086U4H
|
Bladder
|
Anatomical sites: Lymph node
gender: M
age: 60-69
TNM: -
|
Carcinoma of bladder
|
Sample_geo_accession | GSM319805
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319805/suppl/GSM319805.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319806 | GPL96 |
|
P07_6551U4H
|
Thyroid
|
Anatomical sites: Neck
gender: M
age: 60-69
TNM: -
|
Carcinoma of thyroid
|
Sample_geo_accession | GSM319806
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319806/suppl/GSM319806.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319807 | GPL96 |
|
P07_7830U4H
|
Pancreas
|
Anatomical sites: Pancreas
gender: F
age: 70-79
TNM: G3
|
Adenocarcinoma of pancreas
|
Sample_geo_accession | GSM319807
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319807/suppl/GSM319807.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319808 | GPL96 |
|
P06_0282U2H
|
Colorectal
|
Anatomical sites: Pelvic mass
gender: M
age: 70-79
TNM: -
|
Metastatic adenocarcinoma
|
Sample_geo_accession | GSM319808
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319808/suppl/GSM319808.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319809 | GPL96 |
|
P06_0284U2H
|
Skin
|
Anatomical sites: Lung
gender: F
age: 40-49
TNM: -
|
Metastatic melanoma with extensive angiolymphatic and visceral pleaural invasion
|
Sample_geo_accession | GSM319809
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319809/suppl/GSM319809.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319810 | GPL96 |
|
P06_0294U2H
|
Gastric
|
Anatomical sites: Stomach
gender: M
age: 70-79
TNM: 4
|
Invasive poorly differentiated adenocarcinoma with signet ring features
|
Sample_geo_accession | GSM319810
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319810/suppl/GSM319810.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319811 | GPL96 |
|
P06_0295U2H
|
Skin
|
Anatomical sites: Lung
gender: F
age: 40-49
TNM: -
|
Metastatic melanoma
|
Sample_geo_accession | GSM319811
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319811/suppl/GSM319811.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319812 | GPL96 |
|
P06_0298U2H
|
Skin
|
Anatomical sites: Small bowel
gender: F
age: 30-39
TNM: -
|
Metastatic melanoma with multiple foci
|
Sample_geo_accession | GSM319812
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319812/suppl/GSM319812.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319813 | GPL96 |
|
P06_0303U2H
|
Skin
|
Anatomical sites: Lung
gender: F
age: 40-49
TNM: -
|
Metastatic malignant melanoma
|
Sample_geo_accession | GSM319813
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319813/suppl/GSM319813.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319814 | GPL96 |
|
P06_0304U2H
|
Bladder
|
Anatomical sites: Lymph node
gender: M
age: 60-69
TNM: -
|
Metastatic urothelial carcinoma
|
Sample_geo_accession | GSM319814
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319814/suppl/GSM319814.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319815 | GPL96 |
|
P06_0322U2H
|
Bladder
|
Anatomical sites: Lymph node
gender: M
age: 70-79
TNM: -
|
Metastatic high grade urothelial carcinoma
|
Sample_geo_accession | GSM319815
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319815/suppl/GSM319815.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319816 | GPL96 |
|
P06_0330U2H
|
Germ Cell
|
Anatomical sites: Lung
gender: M
age: 30-39
TNM: -
|
Metastatic malignant germ cell neoplasm
|
Sample_geo_accession | GSM319816
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319816/suppl/GSM319816.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319817 | GPL96 |
|
P06_0332U2H
|
Bladder
|
Anatomical sites: Bladder
gender: F
age: 60-69
TNM: 4
|
Invasive urothelial carcinoma
|
Sample_geo_accession | GSM319817
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319817/suppl/GSM319817.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319818 | GPL96 |
|
P06_0334U2H
|
Bladder
|
Anatomical sites: Lymph node
gender: F
age: 60-69
TNM: -
|
Metastatic urothelial carcinoma
|
Sample_geo_accession | GSM319818
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319818/suppl/GSM319818.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319819 | GPL96 |
|
P06_0335U2H
|
Bladder
|
Anatomical sites: Small bowel
gender: M
age: 60-69
TNM: -
|
Poorly differentiated transitional cell carcinoma with squamous cell differentiation and focal mucin production
|
Sample_geo_accession | GSM319819
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319819/suppl/GSM319819.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319820 | GPL96 |
|
X06_0364UXA
|
Prostate
|
Anatomical sites: Liver
gender: M
age: 70-79
TNM: -
|
Metastatic poorly adenocarcinoma consistent w/ prostatic primary
|
Sample_geo_accession | GSM319820
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319820/suppl/GSM319820.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319821 | GPL96 |
|
X06_0384UXA
|
Soft Tissue
|
Anatomical sites: Liver
gender: F
age: 70-79
TNM: -
|
Metastatic pleomorphic sarcoma w/extensive vascular invasion
|
Sample_geo_accession | GSM319821
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319821/suppl/GSM319821.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319822 | GPL96 |
|
X06_0417UXA
|
Kidney
|
Anatomical sites: Lymph node
gender: F
age: 50-59
TNM: -
|
Poorly differentiated metastatic renal clear cell carcinoma with marked desmoplatic response
|
Sample_geo_accession | GSM319822
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319822/suppl/GSM319822.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319823 | GPL96 |
|
U06_0263U2A
|
Lung
|
Anatomical sites: Lymph node
gender: M
age: 60-69
TNM: -
|
Metastatic squamous cell carcinoma
|
Sample_geo_accession | GSM319823
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319823/suppl/GSM319823.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319824 | GPL96 |
|
U06_0265U2A
|
Lymph Node
|
Anatomical sites: Lymph node
gender: M
age: 50-59
TNM: 3 to 4
|
Diffuse large B Cell lymphoma w/ prominent epithelioid cells
|
Sample_geo_accession | GSM319824
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319824/suppl/GSM319824.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319825 | GPL96 |
|
U06_0267U2A
|
Lymph Node
|
Anatomical sites: Lymph node
gender: M
age: 40-49
TNM: 3 to 4
|
Non-Hodgkin's lymphoma
|
Sample_geo_accession | GSM319825
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319825/suppl/GSM319825.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319826 | GPL96 |
|
U06_0326U2A
|
Prostate
|
Anatomical sites: Lymph node
gender: M
age: 60-69
TNM: -
|
Metastatic adenocarcinoma consistent w/ prostatic origin
|
Sample_geo_accession | GSM319826
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319826/suppl/GSM319826.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319827 | GPL96 |
|
U06_0337U2A
|
Gastric
|
Anatomical sites: Lymph node
gender: M
age: 40-49
TNM: -
|
Adenocarcinoma consistent with gastroesophageal origin
|
Sample_geo_accession | GSM319827
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319827/suppl/GSM319827.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319828 | GPL96 |
|
U06_0362U2A
|
Prostate
|
Anatomical sites: Lymph Node
gender: M
age: 50-59
TNM: -
|
Metastatic prostatic adenocarcinoma
|
Sample_geo_accession | GSM319828
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319828/suppl/GSM319828.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319829 | GPL96 |
|
U06_0365U2A
|
Prostate
|
Anatomical sites: Prostate
gender: F
age: 60-69
TNM: 4
|
Invasive poorly differentiated adenocarcinoma
|
Sample_geo_accession | GSM319829
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319829/suppl/GSM319829.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319830 | GPL96 |
|
U06_0366U2A
|
Bladder
|
Anatomical sites: Lymph node
gender: F
age: 60-69
TNM: -
|
Metastatic urothelial carcinoma
|
Sample_geo_accession | GSM319830
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319830/suppl/GSM319830.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319831 | GPL96 |
|
U06_0372U2A
|
Gastric
|
Anatomical sites: Ovary
gender: F
age: 70-79
TNM: -
|
Metastatic poorly diff. adenocarcinoma consistent w/ krukenberg tumor
|
Sample_geo_accession | GSM319831
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319831/suppl/GSM319831.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319832 | GPL96 |
|
U06_0373U2A
|
Gastric
|
Anatomical sites: Chest Wall
gender: M
age: 70-79
TNM: -
|
Metastatic moderately to poorly differentiated adenocarcinoma morphologically similar to esophageal adenocarcinoma
|
Sample_geo_accession | GSM319832
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319832/suppl/GSM319832.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319833 | GPL96 |
|
U06_0378U2A
|
Ovary
|
Anatomical sites: Omentum
gender: M
age: 70-79
TNM: -
|
Metastatic papilary serous carcinoma of ovary
|
Sample_geo_accession | GSM319833
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319833/suppl/GSM319833.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319834 | GPL96 |
|
U06_0382U2A
|
Soft Tissue
|
Anatomical sites: Soft Tissue
gender: M
age: 20-29
TNM: 4
|
High grade spindle cell and pleomorphic sarcoma with leimyosarcomatous and focal liposarcomatous diff.
|
Sample_geo_accession | GSM319834
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319834/suppl/GSM319834.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319835 | GPL96 |
|
U06_0388U2A
|
Germ Cell
|
Anatomical sites: Testicle
gender: M
age: 20-29
TNM: -
|
Malignant mixed germ cell tumor w/ components of embryonal carcinoma (80%) and seminoma (20%)
|
Sample_geo_accession | GSM319835
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319835/suppl/GSM319835.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319836 | GPL96 |
|
U06_0391U2A
|
Bladder
|
Anatomical sites: Lymph node
gender: M
age: 30-39
TNM: -
|
Metastatic urothelial carcinoma
|
Sample_geo_accession | GSM319836
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319836/suppl/GSM319836.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319837 | GPL96 |
|
U06_0403U2A
|
Soft Tissue
|
Anatomical sites: Liver
gender: M
age: 20-29
TNM: -
|
Massive replacement by poorly differentiated malignant neoplasm
|
Sample_geo_accession | GSM319837
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319837/suppl/GSM319837.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319838 | GPL96 |
|
U06_0408U2A
|
Germ Cell
|
Anatomical sites: Testicle
gender: F
age: 50-59
TNM: -
|
Mixed malignant germ cell tumor with embroyonal carcinoma
|
Sample_geo_accession | GSM319838
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319838/suppl/GSM319838.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319839 | GPL96 |
|
U06_0413U2A
|
Soft Tissue
|
Anatomical sites: Lung
gender: M
age: 50-57
TNM: -
|
Metastatic high-grade sarcoma w/ angiolymphatic invasion
|
Sample_geo_accession | GSM319839
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319839/suppl/GSM319839.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319840 | GPL96 |
|
U06_0420U2A
|
Kidney
|
Anatomical sites: Lung
gender: F
age: 70-79
TNM: -
|
Metastatic carcinoma consistent w/renal primary (clear cell type)
|
Sample_geo_accession | GSM319840
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319840/suppl/GSM319840.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319841 | GPL96 |
|
U06_0426U2A
|
Ovary
|
Anatomical sites: Chest wall
gender: F
age: 60-69
TNM: -
|
Metastatic poorly diff. adenocarcinoma consistent with ovarian primary
|
Sample_geo_accession | GSM319841
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319841/suppl/GSM319841.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319842 | GPL96 |
|
U06_0428U2A
|
Soft Tissue
|
Anatomical sites: Lymph node
gender: M
age: 60-69
TNM: -
|
Metastatic alveolar soft part sarcoma
|
Sample_geo_accession | GSM319842
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319842/suppl/GSM319842.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319843 | GPL96 |
|
U06_0431U2A
|
Ovary
|
Anatomical sites: Adrenal gland
gender: M
age: 40-49
TNM: -
|
Moderately to poorly diff. papillary carcinoma
|
Sample_geo_accession | GSM319843
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319843/suppl/GSM319843.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319844 | GPL96 |
|
U06_0432U2A
|
Bladder
|
Anatomical sites: Ureter
gender: M
age: 70-79
TNM: 3 to 4
|
Invasive transitional cell carcinoma
|
Sample_geo_accession | GSM319844
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319844/suppl/GSM319844.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319845 | GPL96 |
|
U06_0438U2A
|
Liver
|
Anatomical sites: Adrenal gland
gender: M
age: 70-79
TNM: -
|
Metastatic hepatocellular carcinoma
|
Sample_geo_accession | GSM319845
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319845/suppl/GSM319845.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319846 | GPL96 |
|
U06_0439U2A
|
Liver
|
Anatomical sites: Mediastinal mass
gender: M
age: 80-89
TNM: -
|
Metastatic fibrolamellar hepatocellular carcinoma
|
Sample_geo_accession | GSM319846
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319846/suppl/GSM319846.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319847 | GPL96 |
|
U06_0499U2A
|
Prostate
|
Anatomical sites: Prostate
gender: M
age: 50-59
TNM: 4
|
Invasive poorly differentiated prostatic adenocarcinoma
|
Sample_geo_accession | GSM319847
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319847/suppl/GSM319847.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319848 | GPL96 |
|
U06_0459UXA
|
Lymph Node
|
Anatomical sites: Extradural Mass (Cranium)
gender: M
age: 80-89
TNM: -
|
Anaplastic Large Cell Lymphoma (CD30)
|
Sample_geo_accession | GSM319848
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 11 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319848/suppl/GSM319848.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
GSM319981 | GPL96 |
|
P06_0400U2H
|
Germ Cell
|
Anatomical sites: Lymph node
gender: F
age: 50-59
TNM: -
|
Metastatic malignant neoplasm, morphologically consistent w/seminoma
|
Sample_geo_accession | GSM319981
| Sample_status | Public on Mar 29 2009
| Sample_submission_date | Sep 12 2008
| Sample_last_update_date | Mar 27 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Qiagen RNEasy kit
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix GeneChip 1-cycle IVT labeling and cDNA synthesis kits
| Sample_hyb_protocol | Affymetrix GeneChip standard protocol
| Sample_scan_protocol | Affymetrix GeneChip standard protocol
| Sample_data_processing | Pathwork standardization (Dumur et al., JMD 2008, Vol. 10, No. 1)
| Sample_platform_id | GPL96
| Sample_contact_name | Ljubomir,,Buturovic
| Sample_contact_department | Application Development
| Sample_contact_institute | Pathwork Diagnostics
| Sample_contact_address | 1196 Borregas Avenue
| Sample_contact_city | Sunnyvale
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94089
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM319nnn/GSM319981/suppl/GSM319981.CEL.gz
| Sample_series_id | GSE12630
| Sample_data_row_count | 22283
| |
|
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Make groups for comparisons |
(2 groups will be compared at a time) |
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Select GSMs and click on "Add groups" |
Enter the group name here: |
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