Search results for the GEO ID: GSE12644 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM317342 | GPL570 |
|
hAorticValve_Ctrl1
|
Normal aortic valve
|
Gender: male
age: 65
|
hAorticValve_VAHN9_Ctrl1
|
Sample_geo_accession | GSM317342
| Sample_status | Public on Jul 09 2009
| Sample_submission_date | Sep 02 2008
| Sample_last_update_date | Jul 09 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted using the RNeasy Lipid Tissue Kit (QIAGEN). The RNA extraction protocol was performed according to manufacturer’s instructions using 100 mg of tissue.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was prepared according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_hyb_protocol | Hybridization was performed according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_scan_protocol | Chips were scanned using a GeneChip Scanner 3000 G7 (Affymetrix) enabled for high-resolution scanning. Images were extracted with the GeneChip Operating Software (Affymetrix GCOS v1.4).
| Sample_data_processing | Expression values were extracted using the Robust Multichip Average method (Irizarry RA, Hobbs B, Collin F, et al. 2003. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4: 249-64)
| Sample_platform_id | GPL570
| Sample_contact_name | Yohan,,Bossé
| Sample_contact_email | yohan.bosse@crhl.ulaval.ca
| Sample_contact_phone | 418-656-8711 3725
| Sample_contact_fax | 418-656-4602
| Sample_contact_institute | Laval University
| Sample_contact_address | 2725, chemin Sainte-Foy
| Sample_contact_city | Quebec
| Sample_contact_state | Quebec
| Sample_contact_zip/postal_code | G1V 4G5
| Sample_contact_country | Canada
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM317nnn/GSM317342/suppl/GSM317342.CEL.gz
| Sample_series_id | GSE12644
| Sample_data_row_count | 54675
| |
|
GSM317343 | GPL570 |
|
hAorticValve_Ctrl2
|
Normal aortic valve
|
Gender: male
age: 73
|
hAorticValve_VAHN21_Ctrl2
|
Sample_geo_accession | GSM317343
| Sample_status | Public on Jul 09 2009
| Sample_submission_date | Sep 02 2008
| Sample_last_update_date | Jul 09 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted using the RNeasy Lipid Tissue Kit (QIAGEN). The RNA extraction protocol was performed according to manufacturer’s instructions using 100 mg of tissue.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was prepared according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_hyb_protocol | Hybridization was performed according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_scan_protocol | Chips were scanned using a GeneChip Scanner 3000 G7 (Affymetrix) enabled for high-resolution scanning. Images were extracted with the GeneChip Operating Software (Affymetrix GCOS v1.4).
| Sample_data_processing | Expression values were extracted using the Robust Multichip Average method (Irizarry RA, Hobbs B, Collin F, et al. 2003. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4: 249-64)
| Sample_platform_id | GPL570
| Sample_contact_name | Yohan,,Bossé
| Sample_contact_email | yohan.bosse@crhl.ulaval.ca
| Sample_contact_phone | 418-656-8711 3725
| Sample_contact_fax | 418-656-4602
| Sample_contact_institute | Laval University
| Sample_contact_address | 2725, chemin Sainte-Foy
| Sample_contact_city | Quebec
| Sample_contact_state | Quebec
| Sample_contact_zip/postal_code | G1V 4G5
| Sample_contact_country | Canada
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM317nnn/GSM317343/suppl/GSM317343.CEL.gz
| Sample_series_id | GSE12644
| Sample_data_row_count | 54675
| |
|
GSM317344 | GPL570 |
|
hAorticValve_Ctrl3
|
Normal aortic valve
|
Gender: male
age: 62
|
hAorticValve_VAHN24_Ctrl3
|
Sample_geo_accession | GSM317344
| Sample_status | Public on Jul 09 2009
| Sample_submission_date | Sep 02 2008
| Sample_last_update_date | Jul 09 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted using the RNeasy Lipid Tissue Kit (QIAGEN). The RNA extraction protocol was performed according to manufacturer’s instructions using 100 mg of tissue.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was prepared according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_hyb_protocol | Hybridization was performed according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_scan_protocol | Chips were scanned using a GeneChip Scanner 3000 G7 (Affymetrix) enabled for high-resolution scanning. Images were extracted with the GeneChip Operating Software (Affymetrix GCOS v1.4).
| Sample_data_processing | Expression values were extracted using the Robust Multichip Average method (Irizarry RA, Hobbs B, Collin F, et al. 2003. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4: 249-64)
| Sample_platform_id | GPL570
| Sample_contact_name | Yohan,,Bossé
| Sample_contact_email | yohan.bosse@crhl.ulaval.ca
| Sample_contact_phone | 418-656-8711 3725
| Sample_contact_fax | 418-656-4602
| Sample_contact_institute | Laval University
| Sample_contact_address | 2725, chemin Sainte-Foy
| Sample_contact_city | Quebec
| Sample_contact_state | Quebec
| Sample_contact_zip/postal_code | G1V 4G5
| Sample_contact_country | Canada
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM317nnn/GSM317344/suppl/GSM317344.CEL.gz
| Sample_series_id | GSE12644
| Sample_data_row_count | 54675
| |
|
GSM317345 | GPL570 |
|
hAorticValve_Ctrl4
|
Normal aortic valve
|
Gender: male
age: 59
|
hAorticValve_VAHN31_Ctrl4
|
Sample_geo_accession | GSM317345
| Sample_status | Public on Jul 09 2009
| Sample_submission_date | Sep 02 2008
| Sample_last_update_date | Jul 09 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted using the RNeasy Lipid Tissue Kit (QIAGEN). The RNA extraction protocol was performed according to manufacturer’s instructions using 100 mg of tissue.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was prepared according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_hyb_protocol | Hybridization was performed according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_scan_protocol | Chips were scanned using a GeneChip Scanner 3000 G7 (Affymetrix) enabled for high-resolution scanning. Images were extracted with the GeneChip Operating Software (Affymetrix GCOS v1.4).
| Sample_data_processing | Expression values were extracted using the Robust Multichip Average method (Irizarry RA, Hobbs B, Collin F, et al. 2003. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4: 249-64)
| Sample_platform_id | GPL570
| Sample_contact_name | Yohan,,Bossé
| Sample_contact_email | yohan.bosse@crhl.ulaval.ca
| Sample_contact_phone | 418-656-8711 3725
| Sample_contact_fax | 418-656-4602
| Sample_contact_institute | Laval University
| Sample_contact_address | 2725, chemin Sainte-Foy
| Sample_contact_city | Quebec
| Sample_contact_state | Quebec
| Sample_contact_zip/postal_code | G1V 4G5
| Sample_contact_country | Canada
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM317nnn/GSM317345/suppl/GSM317345.CEL.gz
| Sample_series_id | GSE12644
| Sample_data_row_count | 54675
| |
|
GSM317346 | GPL570 |
|
hAorticValve_Ctrl5
|
Normal aortic valve
|
Gender: male
age: 58
|
hAorticValve_VAHN47_Ctrl5
|
Sample_geo_accession | GSM317346
| Sample_status | Public on Jul 09 2009
| Sample_submission_date | Sep 02 2008
| Sample_last_update_date | Jul 09 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted using the RNeasy Lipid Tissue Kit (QIAGEN). The RNA extraction protocol was performed according to manufacturer’s instructions using 100 mg of tissue.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was prepared according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_hyb_protocol | Hybridization was performed according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_scan_protocol | Chips were scanned using a GeneChip Scanner 3000 G7 (Affymetrix) enabled for high-resolution scanning. Images were extracted with the GeneChip Operating Software (Affymetrix GCOS v1.4).
| Sample_data_processing | Expression values were extracted using the Robust Multichip Average method (Irizarry RA, Hobbs B, Collin F, et al. 2003. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4: 249-64)
| Sample_platform_id | GPL570
| Sample_contact_name | Yohan,,Bossé
| Sample_contact_email | yohan.bosse@crhl.ulaval.ca
| Sample_contact_phone | 418-656-8711 3725
| Sample_contact_fax | 418-656-4602
| Sample_contact_institute | Laval University
| Sample_contact_address | 2725, chemin Sainte-Foy
| Sample_contact_city | Quebec
| Sample_contact_state | Quebec
| Sample_contact_zip/postal_code | G1V 4G5
| Sample_contact_country | Canada
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM317nnn/GSM317346/suppl/GSM317346.CEL.gz
| Sample_series_id | GSE12644
| Sample_data_row_count | 54675
| |
|
GSM317347 | GPL570 |
|
hAorticValve_Case1
|
Calcified aortic valve
|
Gender: male
age: 70
|
hAorticValve_VAHC79_Case1
|
Sample_geo_accession | GSM317347
| Sample_status | Public on Jul 09 2009
| Sample_submission_date | Sep 02 2008
| Sample_last_update_date | Jul 09 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted using the RNeasy Lipid Tissue Kit (QIAGEN). The RNA extraction protocol was performed according to manufacturer’s instructions using 100 mg of tissue.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was prepared according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_hyb_protocol | Hybridization was performed according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_scan_protocol | Chips were scanned using a GeneChip Scanner 3000 G7 (Affymetrix) enabled for high-resolution scanning. Images were extracted with the GeneChip Operating Software (Affymetrix GCOS v1.4).
| Sample_data_processing | Expression values were extracted using the Robust Multichip Average method (Irizarry RA, Hobbs B, Collin F, et al. 2003. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4: 249-64)
| Sample_platform_id | GPL570
| Sample_contact_name | Yohan,,Bossé
| Sample_contact_email | yohan.bosse@crhl.ulaval.ca
| Sample_contact_phone | 418-656-8711 3725
| Sample_contact_fax | 418-656-4602
| Sample_contact_institute | Laval University
| Sample_contact_address | 2725, chemin Sainte-Foy
| Sample_contact_city | Quebec
| Sample_contact_state | Quebec
| Sample_contact_zip/postal_code | G1V 4G5
| Sample_contact_country | Canada
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM317nnn/GSM317347/suppl/GSM317347.CEL.gz
| Sample_series_id | GSE12644
| Sample_data_row_count | 54675
| |
|
GSM317348 | GPL570 |
|
hAorticValve_Case2
|
Calcified aortic valve
|
Gender: male
age: 74
|
hAorticValve_VAHC8_Case2
|
Sample_geo_accession | GSM317348
| Sample_status | Public on Jul 09 2009
| Sample_submission_date | Sep 02 2008
| Sample_last_update_date | Jul 09 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted using the RNeasy Lipid Tissue Kit (QIAGEN). The RNA extraction protocol was performed according to manufacturer’s instructions using 100 mg of tissue.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was prepared according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_hyb_protocol | Hybridization was performed according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_scan_protocol | Chips were scanned using a GeneChip Scanner 3000 G7 (Affymetrix) enabled for high-resolution scanning. Images were extracted with the GeneChip Operating Software (Affymetrix GCOS v1.4).
| Sample_data_processing | Expression values were extracted using the Robust Multichip Average method (Irizarry RA, Hobbs B, Collin F, et al. 2003. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4: 249-64)
| Sample_platform_id | GPL570
| Sample_contact_name | Yohan,,Bossé
| Sample_contact_email | yohan.bosse@crhl.ulaval.ca
| Sample_contact_phone | 418-656-8711 3725
| Sample_contact_fax | 418-656-4602
| Sample_contact_institute | Laval University
| Sample_contact_address | 2725, chemin Sainte-Foy
| Sample_contact_city | Quebec
| Sample_contact_state | Quebec
| Sample_contact_zip/postal_code | G1V 4G5
| Sample_contact_country | Canada
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM317nnn/GSM317348/suppl/GSM317348.CEL.gz
| Sample_series_id | GSE12644
| Sample_data_row_count | 54675
| |
|
GSM317349 | GPL570 |
|
hAorticValve_Case3
|
Calcified aortic valve
|
Gender: male
age: 69
|
hAorticValve_VAHC220_Case3
|
Sample_geo_accession | GSM317349
| Sample_status | Public on Jul 09 2009
| Sample_submission_date | Sep 02 2008
| Sample_last_update_date | Jul 09 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted using the RNeasy Lipid Tissue Kit (QIAGEN). The RNA extraction protocol was performed according to manufacturer’s instructions using 100 mg of tissue.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was prepared according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_hyb_protocol | Hybridization was performed according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_scan_protocol | Chips were scanned using a GeneChip Scanner 3000 G7 (Affymetrix) enabled for high-resolution scanning. Images were extracted with the GeneChip Operating Software (Affymetrix GCOS v1.4).
| Sample_data_processing | Expression values were extracted using the Robust Multichip Average method (Irizarry RA, Hobbs B, Collin F, et al. 2003. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4: 249-64)
| Sample_platform_id | GPL570
| Sample_contact_name | Yohan,,Bossé
| Sample_contact_email | yohan.bosse@crhl.ulaval.ca
| Sample_contact_phone | 418-656-8711 3725
| Sample_contact_fax | 418-656-4602
| Sample_contact_institute | Laval University
| Sample_contact_address | 2725, chemin Sainte-Foy
| Sample_contact_city | Quebec
| Sample_contact_state | Quebec
| Sample_contact_zip/postal_code | G1V 4G5
| Sample_contact_country | Canada
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM317nnn/GSM317349/suppl/GSM317349.CEL.gz
| Sample_series_id | GSE12644
| Sample_data_row_count | 54675
| |
|
GSM317350 | GPL570 |
|
hAorticValve_Case4
|
Calcified aortic valve
|
Gender: male
age: 64
|
hAorticValve_VAHC147_Case4
|
Sample_geo_accession | GSM317350
| Sample_status | Public on Jul 09 2009
| Sample_submission_date | Sep 02 2008
| Sample_last_update_date | Jul 09 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted using the RNeasy Lipid Tissue Kit (QIAGEN). The RNA extraction protocol was performed according to manufacturer’s instructions using 100 mg of tissue.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was prepared according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_hyb_protocol | Hybridization was performed according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_scan_protocol | Chips were scanned using a GeneChip Scanner 3000 G7 (Affymetrix) enabled for high-resolution scanning. Images were extracted with the GeneChip Operating Software (Affymetrix GCOS v1.4).
| Sample_data_processing | Expression values were extracted using the Robust Multichip Average method (Irizarry RA, Hobbs B, Collin F, et al. 2003. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4: 249-64)
| Sample_platform_id | GPL570
| Sample_contact_name | Yohan,,Bossé
| Sample_contact_email | yohan.bosse@crhl.ulaval.ca
| Sample_contact_phone | 418-656-8711 3725
| Sample_contact_fax | 418-656-4602
| Sample_contact_institute | Laval University
| Sample_contact_address | 2725, chemin Sainte-Foy
| Sample_contact_city | Quebec
| Sample_contact_state | Quebec
| Sample_contact_zip/postal_code | G1V 4G5
| Sample_contact_country | Canada
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM317nnn/GSM317350/suppl/GSM317350.CEL.gz
| Sample_series_id | GSE12644
| Sample_data_row_count | 54675
| |
|
GSM317351 | GPL570 |
|
hAorticValve_Case5
|
Calcified aortic valve
|
Gender: male
age: 60
|
hAorticValve_VAHC15_Case5
|
Sample_geo_accession | GSM317351
| Sample_status | Public on Jul 09 2009
| Sample_submission_date | Sep 02 2008
| Sample_last_update_date | Jul 09 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted using the RNeasy Lipid Tissue Kit (QIAGEN). The RNA extraction protocol was performed according to manufacturer’s instructions using 100 mg of tissue.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was prepared according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_hyb_protocol | Hybridization was performed according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_scan_protocol | Chips were scanned using a GeneChip Scanner 3000 G7 (Affymetrix) enabled for high-resolution scanning. Images were extracted with the GeneChip Operating Software (Affymetrix GCOS v1.4).
| Sample_data_processing | Expression values were extracted using the Robust Multichip Average method (Irizarry RA, Hobbs B, Collin F, et al. 2003. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4: 249-64)
| Sample_platform_id | GPL570
| Sample_contact_name | Yohan,,Bossé
| Sample_contact_email | yohan.bosse@crhl.ulaval.ca
| Sample_contact_phone | 418-656-8711 3725
| Sample_contact_fax | 418-656-4602
| Sample_contact_institute | Laval University
| Sample_contact_address | 2725, chemin Sainte-Foy
| Sample_contact_city | Quebec
| Sample_contact_state | Quebec
| Sample_contact_zip/postal_code | G1V 4G5
| Sample_contact_country | Canada
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM317nnn/GSM317351/suppl/GSM317351.CEL.gz
| Sample_series_id | GSE12644
| Sample_data_row_count | 54675
| |
|
GSM377368 | GPL570 |
|
hAorticValve_Ctrl6
|
Normal aortic valve
|
gender: male
age: 32
|
none
|
Sample_geo_accession | GSM377368
| Sample_status | Public on Jul 09 2009
| Sample_submission_date | Mar 03 2009
| Sample_last_update_date | Jul 09 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted using the RNeasy Lipid Tissue Kit (QIAGEN). The RNA extraction protocol was performed according to manufacturer’s instructions using 100 mg of tissue.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was prepared according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_hyb_protocol | Hybridization was performed according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_scan_protocol | Chips were scanned using a GeneChip Scanner 3000 G7 (Affymetrix) enabled for high-resolution scanning. Images were extracted with the GeneChip Operating Software (Affymetrix GCOS v1.4).
| Sample_data_processing | Expression values were extracted using the Robust Multichip Average method (Irizarry RA, Hobbs B, Collin F, et al. 2003. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4: 249-64)
| Sample_platform_id | GPL570
| Sample_contact_name | Yohan,,Bossé
| Sample_contact_email | yohan.bosse@crhl.ulaval.ca
| Sample_contact_phone | 418-656-8711 3725
| Sample_contact_fax | 418-656-4602
| Sample_contact_institute | Laval University
| Sample_contact_address | 2725, chemin Sainte-Foy
| Sample_contact_city | Quebec
| Sample_contact_state | Quebec
| Sample_contact_zip/postal_code | G1V 4G5
| Sample_contact_country | Canada
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM377nnn/GSM377368/suppl/GSM377368.CEL.gz
| Sample_series_id | GSE12644
| Sample_data_row_count | 54675
| |
|
GSM377369 | GPL570 |
|
hAorticValve_Ctrl7
|
Normal aortic valve
|
gender: male
age: 51
|
none
|
Sample_geo_accession | GSM377369
| Sample_status | Public on Jul 09 2009
| Sample_submission_date | Mar 03 2009
| Sample_last_update_date | Jul 09 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted using the RNeasy Lipid Tissue Kit (QIAGEN). The RNA extraction protocol was performed according to manufacturer’s instructions using 100 mg of tissue.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was prepared according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_hyb_protocol | Hybridization was performed according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_scan_protocol | Chips were scanned using a GeneChip Scanner 3000 G7 (Affymetrix) enabled for high-resolution scanning. Images were extracted with the GeneChip Operating Software (Affymetrix GCOS v1.4).
| Sample_data_processing | Expression values were extracted using the Robust Multichip Average method (Irizarry RA, Hobbs B, Collin F, et al. 2003. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4: 249-64)
| Sample_platform_id | GPL570
| Sample_contact_name | Yohan,,Bossé
| Sample_contact_email | yohan.bosse@crhl.ulaval.ca
| Sample_contact_phone | 418-656-8711 3725
| Sample_contact_fax | 418-656-4602
| Sample_contact_institute | Laval University
| Sample_contact_address | 2725, chemin Sainte-Foy
| Sample_contact_city | Quebec
| Sample_contact_state | Quebec
| Sample_contact_zip/postal_code | G1V 4G5
| Sample_contact_country | Canada
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM377nnn/GSM377369/suppl/GSM377369.CEL.gz
| Sample_series_id | GSE12644
| Sample_data_row_count | 54675
| |
|
GSM377370 | GPL570 |
|
hAorticValve_Ctrl8
|
Normal aortic valve
|
gender: male
age: 58
|
none
|
Sample_geo_accession | GSM377370
| Sample_status | Public on Jul 09 2009
| Sample_submission_date | Mar 03 2009
| Sample_last_update_date | Jul 09 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted using the RNeasy Lipid Tissue Kit (QIAGEN). The RNA extraction protocol was performed according to manufacturer’s instructions using 100 mg of tissue.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was prepared according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_hyb_protocol | Hybridization was performed according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_scan_protocol | Chips were scanned using a GeneChip Scanner 3000 G7 (Affymetrix) enabled for high-resolution scanning. Images were extracted with the GeneChip Operating Software (Affymetrix GCOS v1.4).
| Sample_data_processing | Expression values were extracted using the Robust Multichip Average method (Irizarry RA, Hobbs B, Collin F, et al. 2003. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4: 249-64)
| Sample_platform_id | GPL570
| Sample_contact_name | Yohan,,Bossé
| Sample_contact_email | yohan.bosse@crhl.ulaval.ca
| Sample_contact_phone | 418-656-8711 3725
| Sample_contact_fax | 418-656-4602
| Sample_contact_institute | Laval University
| Sample_contact_address | 2725, chemin Sainte-Foy
| Sample_contact_city | Quebec
| Sample_contact_state | Quebec
| Sample_contact_zip/postal_code | G1V 4G5
| Sample_contact_country | Canada
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM377nnn/GSM377370/suppl/GSM377370.CEL.gz
| Sample_series_id | GSE12644
| Sample_data_row_count | 54675
| |
|
GSM377371 | GPL570 |
|
hAorticValve_Ctrl9
|
Normal aortic valve
|
gender: male
age: 67
|
none
|
Sample_geo_accession | GSM377371
| Sample_status | Public on Jul 09 2009
| Sample_submission_date | Mar 03 2009
| Sample_last_update_date | Jul 09 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted using the RNeasy Lipid Tissue Kit (QIAGEN). The RNA extraction protocol was performed according to manufacturer’s instructions using 100 mg of tissue.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was prepared according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_hyb_protocol | Hybridization was performed according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_scan_protocol | Chips were scanned using a GeneChip Scanner 3000 G7 (Affymetrix) enabled for high-resolution scanning. Images were extracted with the GeneChip Operating Software (Affymetrix GCOS v1.4).
| Sample_data_processing | Expression values were extracted using the Robust Multichip Average method (Irizarry RA, Hobbs B, Collin F, et al. 2003. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4: 249-64)
| Sample_platform_id | GPL570
| Sample_contact_name | Yohan,,Bossé
| Sample_contact_email | yohan.bosse@crhl.ulaval.ca
| Sample_contact_phone | 418-656-8711 3725
| Sample_contact_fax | 418-656-4602
| Sample_contact_institute | Laval University
| Sample_contact_address | 2725, chemin Sainte-Foy
| Sample_contact_city | Quebec
| Sample_contact_state | Quebec
| Sample_contact_zip/postal_code | G1V 4G5
| Sample_contact_country | Canada
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM377nnn/GSM377371/suppl/GSM377371.CEL.gz
| Sample_series_id | GSE12644
| Sample_data_row_count | 54675
| |
|
GSM377372 | GPL570 |
|
hAorticValve_Ctrl10
|
Normal aortic valve
|
gender: male
age: 61
|
none
|
Sample_geo_accession | GSM377372
| Sample_status | Public on Jul 09 2009
| Sample_submission_date | Mar 03 2009
| Sample_last_update_date | Jul 09 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted using the RNeasy Lipid Tissue Kit (QIAGEN). The RNA extraction protocol was performed according to manufacturer’s instructions using 100 mg of tissue.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was prepared according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_hyb_protocol | Hybridization was performed according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_scan_protocol | Chips were scanned using a GeneChip Scanner 3000 G7 (Affymetrix) enabled for high-resolution scanning. Images were extracted with the GeneChip Operating Software (Affymetrix GCOS v1.4).
| Sample_data_processing | Expression values were extracted using the Robust Multichip Average method (Irizarry RA, Hobbs B, Collin F, et al. 2003. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4: 249-64)
| Sample_platform_id | GPL570
| Sample_contact_name | Yohan,,Bossé
| Sample_contact_email | yohan.bosse@crhl.ulaval.ca
| Sample_contact_phone | 418-656-8711 3725
| Sample_contact_fax | 418-656-4602
| Sample_contact_institute | Laval University
| Sample_contact_address | 2725, chemin Sainte-Foy
| Sample_contact_city | Quebec
| Sample_contact_state | Quebec
| Sample_contact_zip/postal_code | G1V 4G5
| Sample_contact_country | Canada
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM377nnn/GSM377372/suppl/GSM377372.CEL.gz
| Sample_series_id | GSE12644
| Sample_data_row_count | 54675
| |
|
GSM377373 | GPL570 |
|
hAorticValve_Case6
|
Calcified aortic valve
|
gender: male
age: 48
|
none
|
Sample_geo_accession | GSM377373
| Sample_status | Public on Jul 09 2009
| Sample_submission_date | Mar 03 2009
| Sample_last_update_date | Jul 09 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted using the RNeasy Lipid Tissue Kit (QIAGEN). The RNA extraction protocol was performed according to manufacturer’s instructions using 100 mg of tissue.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was prepared according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_hyb_protocol | Hybridization was performed according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_scan_protocol | Chips were scanned using a GeneChip Scanner 3000 G7 (Affymetrix) enabled for high-resolution scanning. Images were extracted with the GeneChip Operating Software (Affymetrix GCOS v1.4).
| Sample_data_processing | Expression values were extracted using the Robust Multichip Average method (Irizarry RA, Hobbs B, Collin F, et al. 2003. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4: 249-64)
| Sample_platform_id | GPL570
| Sample_contact_name | Yohan,,Bossé
| Sample_contact_email | yohan.bosse@crhl.ulaval.ca
| Sample_contact_phone | 418-656-8711 3725
| Sample_contact_fax | 418-656-4602
| Sample_contact_institute | Laval University
| Sample_contact_address | 2725, chemin Sainte-Foy
| Sample_contact_city | Quebec
| Sample_contact_state | Quebec
| Sample_contact_zip/postal_code | G1V 4G5
| Sample_contact_country | Canada
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM377nnn/GSM377373/suppl/GSM377373.CEL.gz
| Sample_series_id | GSE12644
| Sample_data_row_count | 54675
| |
|
GSM377374 | GPL570 |
|
hAorticValve_Case7
|
Calcified aortic valve
|
gender: male
age: 51
|
none
|
Sample_geo_accession | GSM377374
| Sample_status | Public on Jul 09 2009
| Sample_submission_date | Mar 03 2009
| Sample_last_update_date | Jul 09 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted using the RNeasy Lipid Tissue Kit (QIAGEN). The RNA extraction protocol was performed according to manufacturer’s instructions using 100 mg of tissue.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was prepared according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_hyb_protocol | Hybridization was performed according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_scan_protocol | Chips were scanned using a GeneChip Scanner 3000 G7 (Affymetrix) enabled for high-resolution scanning. Images were extracted with the GeneChip Operating Software (Affymetrix GCOS v1.4).
| Sample_data_processing | Expression values were extracted using the Robust Multichip Average method (Irizarry RA, Hobbs B, Collin F, et al. 2003. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4: 249-64)
| Sample_platform_id | GPL570
| Sample_contact_name | Yohan,,Bossé
| Sample_contact_email | yohan.bosse@crhl.ulaval.ca
| Sample_contact_phone | 418-656-8711 3725
| Sample_contact_fax | 418-656-4602
| Sample_contact_institute | Laval University
| Sample_contact_address | 2725, chemin Sainte-Foy
| Sample_contact_city | Quebec
| Sample_contact_state | Quebec
| Sample_contact_zip/postal_code | G1V 4G5
| Sample_contact_country | Canada
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM377nnn/GSM377374/suppl/GSM377374.CEL.gz
| Sample_series_id | GSE12644
| Sample_data_row_count | 54675
| |
|
GSM377375 | GPL570 |
|
hAorticValve_Case8
|
Calcified aortic valve
|
gender: male
age: 68
|
none
|
Sample_geo_accession | GSM377375
| Sample_status | Public on Jul 09 2009
| Sample_submission_date | Mar 03 2009
| Sample_last_update_date | Jul 09 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted using the RNeasy Lipid Tissue Kit (QIAGEN). The RNA extraction protocol was performed according to manufacturer’s instructions using 100 mg of tissue.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was prepared according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_hyb_protocol | Hybridization was performed according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_scan_protocol | Chips were scanned using a GeneChip Scanner 3000 G7 (Affymetrix) enabled for high-resolution scanning. Images were extracted with the GeneChip Operating Software (Affymetrix GCOS v1.4).
| Sample_data_processing | Expression values were extracted using the Robust Multichip Average method (Irizarry RA, Hobbs B, Collin F, et al. 2003. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4: 249-64)
| Sample_platform_id | GPL570
| Sample_contact_name | Yohan,,Bossé
| Sample_contact_email | yohan.bosse@crhl.ulaval.ca
| Sample_contact_phone | 418-656-8711 3725
| Sample_contact_fax | 418-656-4602
| Sample_contact_institute | Laval University
| Sample_contact_address | 2725, chemin Sainte-Foy
| Sample_contact_city | Quebec
| Sample_contact_state | Quebec
| Sample_contact_zip/postal_code | G1V 4G5
| Sample_contact_country | Canada
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM377nnn/GSM377375/suppl/GSM377375.CEL.gz
| Sample_series_id | GSE12644
| Sample_data_row_count | 54675
| |
|
GSM377376 | GPL570 |
|
hAorticValve_Case9
|
Calcified aortic valve
|
gender: male
age: 56
|
none
|
Sample_geo_accession | GSM377376
| Sample_status | Public on Jul 09 2009
| Sample_submission_date | Mar 03 2009
| Sample_last_update_date | Jul 09 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted using the RNeasy Lipid Tissue Kit (QIAGEN). The RNA extraction protocol was performed according to manufacturer’s instructions using 100 mg of tissue.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was prepared according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_hyb_protocol | Hybridization was performed according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_scan_protocol | Chips were scanned using a GeneChip Scanner 3000 G7 (Affymetrix) enabled for high-resolution scanning. Images were extracted with the GeneChip Operating Software (Affymetrix GCOS v1.4).
| Sample_data_processing | Expression values were extracted using the Robust Multichip Average method (Irizarry RA, Hobbs B, Collin F, et al. 2003. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4: 249-64)
| Sample_platform_id | GPL570
| Sample_contact_name | Yohan,,Bossé
| Sample_contact_email | yohan.bosse@crhl.ulaval.ca
| Sample_contact_phone | 418-656-8711 3725
| Sample_contact_fax | 418-656-4602
| Sample_contact_institute | Laval University
| Sample_contact_address | 2725, chemin Sainte-Foy
| Sample_contact_city | Quebec
| Sample_contact_state | Quebec
| Sample_contact_zip/postal_code | G1V 4G5
| Sample_contact_country | Canada
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM377nnn/GSM377376/suppl/GSM377376.CEL.gz
| Sample_series_id | GSE12644
| Sample_data_row_count | 54675
| |
|
GSM377377 | GPL570 |
|
hAorticValve_Case10
|
Calcified aortic valve
|
gender: male
age: 65
|
none
|
Sample_geo_accession | GSM377377
| Sample_status | Public on Jul 09 2009
| Sample_submission_date | Mar 03 2009
| Sample_last_update_date | Jul 09 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA was extracted using the RNeasy Lipid Tissue Kit (QIAGEN). The RNA extraction protocol was performed according to manufacturer’s instructions using 100 mg of tissue.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA was prepared according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_hyb_protocol | Hybridization was performed according to the standard Affymetrix protocol (see complete protocol descriptions: http://www.affymetrix.com/support/technical/manual/expression_manual.affx)
| Sample_scan_protocol | Chips were scanned using a GeneChip Scanner 3000 G7 (Affymetrix) enabled for high-resolution scanning. Images were extracted with the GeneChip Operating Software (Affymetrix GCOS v1.4).
| Sample_data_processing | Expression values were extracted using the Robust Multichip Average method (Irizarry RA, Hobbs B, Collin F, et al. 2003. Exploration, normalization, and summaries of high density oligonucleotide array probe level data. Biostatistics 4: 249-64)
| Sample_platform_id | GPL570
| Sample_contact_name | Yohan,,Bossé
| Sample_contact_email | yohan.bosse@crhl.ulaval.ca
| Sample_contact_phone | 418-656-8711 3725
| Sample_contact_fax | 418-656-4602
| Sample_contact_institute | Laval University
| Sample_contact_address | 2725, chemin Sainte-Foy
| Sample_contact_city | Quebec
| Sample_contact_state | Quebec
| Sample_contact_zip/postal_code | G1V 4G5
| Sample_contact_country | Canada
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM377nnn/GSM377377/suppl/GSM377377.CEL.gz
| Sample_series_id | GSE12644
| Sample_data_row_count | 54675
| |
|
|
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Make groups for comparisons |
(2 groups will be compared at a time) |
|
Select GSMs and click on "Add groups" |
Enter the group name here: |
|
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