Search results for the GEO ID: GSE12694 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM318674 | GPL1261 |
|
Brain_p53-null_rep1
|
Brain_p53-null_rep1
|
Brain_p53-null
|
p53F1
|
Sample_geo_accession | GSM318674
| Sample_status | Public on Oct 01 2008
| Sample_submission_date | Sep 08 2008
| Sample_last_update_date | Sep 08 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA followed by Rneasy column cleanup was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Arrays were normalized using Invariant Set Normalization, and modeled using the Li and Wong model
| Sample_platform_id | GPL1261
| Sample_contact_name | Hongwu,,Zheng
| Sample_contact_laboratory | M-416
| Sample_contact_department | Medical Oncology
| Sample_contact_institute | Dana-Farber Cancer Institute
| Sample_contact_address | 44 Binney St
| Sample_contact_city | Boston
| Sample_contact_state | MA
| Sample_contact_zip/postal_code | 02115
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM318nnn/GSM318674/suppl/GSM318674.CEL.gz
| Sample_series_id | GSE12694
| Sample_data_row_count | 45101
| |
|
GSM318675 | GPL1261 |
|
Brain_p53-null_rep2
|
Brain_p53-null_rep2
|
Brain_p53-null
|
p53F2
|
Sample_geo_accession | GSM318675
| Sample_status | Public on Oct 01 2008
| Sample_submission_date | Sep 08 2008
| Sample_last_update_date | Sep 08 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA followed by Rneasy column cleanup was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Arrays were normalized using Invariant Set Normalization, and modeled using the Li and Wong model
| Sample_platform_id | GPL1261
| Sample_contact_name | Hongwu,,Zheng
| Sample_contact_laboratory | M-416
| Sample_contact_department | Medical Oncology
| Sample_contact_institute | Dana-Farber Cancer Institute
| Sample_contact_address | 44 Binney St
| Sample_contact_city | Boston
| Sample_contact_state | MA
| Sample_contact_zip/postal_code | 02115
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM318nnn/GSM318675/suppl/GSM318675.CEL.gz
| Sample_series_id | GSE12694
| Sample_data_row_count | 45101
| |
|
GSM318676 | GPL1261 |
|
Brain_p53-Pten-null_rep1
|
Brain_p53-Pten-null_rep1
|
Brain_p53-Pten-null
|
DF1
|
Sample_geo_accession | GSM318676
| Sample_status | Public on Oct 01 2008
| Sample_submission_date | Sep 08 2008
| Sample_last_update_date | Sep 08 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA followed by Rneasy column cleanup was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Arrays were normalized using Invariant Set Normalization, and modeled using the Li and Wong model
| Sample_platform_id | GPL1261
| Sample_contact_name | Hongwu,,Zheng
| Sample_contact_laboratory | M-416
| Sample_contact_department | Medical Oncology
| Sample_contact_institute | Dana-Farber Cancer Institute
| Sample_contact_address | 44 Binney St
| Sample_contact_city | Boston
| Sample_contact_state | MA
| Sample_contact_zip/postal_code | 02115
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM318nnn/GSM318676/suppl/GSM318676.CEL.gz
| Sample_series_id | GSE12694
| Sample_data_row_count | 45101
| |
|
GSM318677 | GPL1261 |
|
Brain_p53-Pten-null_rep2
|
Brain_p53-Pten-null_rep2
|
Brain_p53-Pten-null
|
DF2
|
Sample_geo_accession | GSM318677
| Sample_status | Public on Oct 01 2008
| Sample_submission_date | Sep 08 2008
| Sample_last_update_date | Sep 08 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA followed by Rneasy column cleanup was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Arrays were normalized using Invariant Set Normalization, and modeled using the Li and Wong model
| Sample_platform_id | GPL1261
| Sample_contact_name | Hongwu,,Zheng
| Sample_contact_laboratory | M-416
| Sample_contact_department | Medical Oncology
| Sample_contact_institute | Dana-Farber Cancer Institute
| Sample_contact_address | 44 Binney St
| Sample_contact_city | Boston
| Sample_contact_state | MA
| Sample_contact_zip/postal_code | 02115
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM318nnn/GSM318677/suppl/GSM318677.CEL.gz
| Sample_series_id | GSE12694
| Sample_data_row_count | 45101
| |
|
GSM318678 | GPL1261 |
|
Brain_p53-Pten-null_rep3
|
Brain_p53-Pten-null_rep3
|
Brain_p53-Pten-null
|
DF3
|
Sample_geo_accession | GSM318678
| Sample_status | Public on Oct 01 2008
| Sample_submission_date | Sep 08 2008
| Sample_last_update_date | Sep 08 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA followed by Rneasy column cleanup was performed according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| Sample_data_processing | Arrays were normalized using Invariant Set Normalization, and modeled using the Li and Wong model
| Sample_platform_id | GPL1261
| Sample_contact_name | Hongwu,,Zheng
| Sample_contact_laboratory | M-416
| Sample_contact_department | Medical Oncology
| Sample_contact_institute | Dana-Farber Cancer Institute
| Sample_contact_address | 44 Binney St
| Sample_contact_city | Boston
| Sample_contact_state | MA
| Sample_contact_zip/postal_code | 02115
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM318nnn/GSM318678/suppl/GSM318678.CEL.gz
| Sample_series_id | GSE12694
| Sample_data_row_count | 45101
| |
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