Search results for the GEO ID: GSE12950 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM324496 | GPL1261 |
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mtestis_AKR-N_rep1
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Murine testes of AKR/N strain replicates 1
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Gene expression profile of testes from three mouse strains, AKR/N, C57BL/6,MRL/MpJ+/+ (all mice used were 8 weeks old)
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All methodolgy for this dataset was described in the manuscript of "Differential gene expression in the testes of different murine strains under normal and hyperthermic conditions"
|
Sample_geo_accession | GSM324496
| Sample_status | Public on Nov 01 2008
| Sample_submission_date | Sep 25 2008
| Sample_last_update_date | Oct 01 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | GeneChip Expression 3' - Amplification one-cycle cDNA synthesis kit (lpn-900431)
| Sample_hyb_protocol | Standard hybridization protocol using 15ug cRNA
| Sample_hyb_protocol | wash/stain protocol EukGe-2v5-450
| Sample_scan_protocol | Affymetrix GeneChip® Operating Software (GCOS) automates the control of GeneChip® Fluidics Stations and Scanners. In addition, GCOS acquires data, manages sample and experimental information, and performs gene expression data analysis.
| Sample_data_processing | For each microarray, probe set signal values were initially normalized by scaling to a target intensity of 125.
| Sample_platform_id | GPL1261
| Sample_contact_name | Lizhong,,Yang
| Sample_contact_email | lzyang@wsu.edu
| Sample_contact_phone | 1-509-335-2240
| Sample_contact_fax | 1-509-335-9688
| Sample_contact_laboratory | Griswold Lab/Center for Reproductive Biology
| Sample_contact_department | School of Molecular Biosciences
| Sample_contact_institute | Washington State University
| Sample_contact_address | 531 Fulmer Hall/POB 644660
| Sample_contact_city | Pullman
| Sample_contact_state | WA
| Sample_contact_zip/postal_code | 99164-4660
| Sample_contact_country | USA
| Sample_contact_web_link | http://www.wsu.edu/~griswold
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM324nnn/GSM324496/suppl/GSM324496.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM324nnn/GSM324496/suppl/GSM324496.chp.gz
| Sample_series_id | GSE12950
| Sample_data_row_count | 45101
| |
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GSM324497 | GPL1261 |
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mtestis_C57BL-6_rep1
|
Murine testes of C57BL/6 strain replicates 1
|
Gene expression profile of testes from three mouse strains, AKR/N, C57BL/6,MRL/MpJ+/+ (all mice used were 8 weeks old)
|
All methodolgy for this dataset was described in the manuscript of "Differential gene expression in the testes of different murine strains under normal and hyperthermic conditions"
|
Sample_geo_accession | GSM324497
| Sample_status | Public on Nov 01 2008
| Sample_submission_date | Sep 25 2008
| Sample_last_update_date | Oct 01 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | GeneChip Expression 3' - Amplification one-cycle cDNA synthesis kit (lpn-900431)
| Sample_hyb_protocol | Standard hybridization protocol using 15ug cRNA
| Sample_hyb_protocol | wash/stain protocol EukGe-2v5-450
| Sample_scan_protocol | Affymetrix GeneChip® Operating Software (GCOS) automates the control of GeneChip® Fluidics Stations and Scanners. In addition, GCOS acquires data, manages sample and experimental information, and performs gene expression data analysis.
| Sample_data_processing | For each microarray, probe set signal values were initially normalized by scaling to a target intensity of 125.
| Sample_platform_id | GPL1261
| Sample_contact_name | Lizhong,,Yang
| Sample_contact_email | lzyang@wsu.edu
| Sample_contact_phone | 1-509-335-2240
| Sample_contact_fax | 1-509-335-9688
| Sample_contact_laboratory | Griswold Lab/Center for Reproductive Biology
| Sample_contact_department | School of Molecular Biosciences
| Sample_contact_institute | Washington State University
| Sample_contact_address | 531 Fulmer Hall/POB 644660
| Sample_contact_city | Pullman
| Sample_contact_state | WA
| Sample_contact_zip/postal_code | 99164-4660
| Sample_contact_country | USA
| Sample_contact_web_link | http://www.wsu.edu/~griswold
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM324nnn/GSM324497/suppl/GSM324497.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM324nnn/GSM324497/suppl/GSM324497.chp.gz
| Sample_series_id | GSE12950
| Sample_data_row_count | 45101
| |
|
GSM324498 | GPL1261 |
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mtestis_C57BL-6_rep2
|
Murine testes of C57BL/6 strain replicates 2
|
Gene expression profile of testes from three mouse strains, AKR/N, C57BL/6,MRL/MpJ+/+ (all mice used were 8 weeks old)
|
All methodolgy for this dataset was described in the manuscript of "Differential gene expression in the testes of different murine strains under normal and hyperthermic conditions"
|
Sample_geo_accession | GSM324498
| Sample_status | Public on Nov 01 2008
| Sample_submission_date | Sep 25 2008
| Sample_last_update_date | Sep 30 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | GeneChip Expression 3' - Amplification one-cycle cDNA synthesis kit (lpn-900431)
| Sample_hyb_protocol | Standard hybridization protocol using 15ug cRNA
| Sample_hyb_protocol | wash/stain protocol EukGe-2v5-450
| Sample_scan_protocol | Affymetrix GeneChip® Operating Software (GCOS) automates the control of GeneChip® Fluidics Stations and Scanners. In addition, GCOS acquires data, manages sample and experimental information, and performs gene expression data analysis.
| Sample_data_processing | For each microarray, probe set signal values were initially normalized by scaling to a target intensity of 125.
| Sample_platform_id | GPL1261
| Sample_contact_name | Lizhong,,Yang
| Sample_contact_email | lzyang@wsu.edu
| Sample_contact_phone | 1-509-335-2240
| Sample_contact_fax | 1-509-335-9688
| Sample_contact_laboratory | Griswold Lab/Center for Reproductive Biology
| Sample_contact_department | School of Molecular Biosciences
| Sample_contact_institute | Washington State University
| Sample_contact_address | 531 Fulmer Hall/POB 644660
| Sample_contact_city | Pullman
| Sample_contact_state | WA
| Sample_contact_zip/postal_code | 99164-4660
| Sample_contact_country | USA
| Sample_contact_web_link | http://www.wsu.edu/~griswold
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM324nnn/GSM324498/suppl/GSM324498.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM324nnn/GSM324498/suppl/GSM324498.chp.gz
| Sample_series_id | GSE12950
| Sample_data_row_count | 45101
| |
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GSM324499 | GPL1261 |
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mtestis_MRL-MPJ_rep1
|
Murine testes of MRL/MpJ+/+ strain replicates 1
|
Gene expression profile of testes from three mouse strains, AKR/N, C57BL/6,MRL/MpJ+/+ (all mice used were 8 weeks old)
|
All methodolgy for this dataset was described in the manuscript of "Differential gene expression in the testes of different murine strains under normal and hyperthermic conditions"
|
Sample_geo_accession | GSM324499
| Sample_status | Public on Nov 01 2008
| Sample_submission_date | Sep 25 2008
| Sample_last_update_date | Sep 30 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | GeneChip Expression 3' - Amplification one-cycle cDNA synthesis kit (lpn-900431)
| Sample_hyb_protocol | Standard hybridization protocol using 15ug cRNA
| Sample_hyb_protocol | wash/stain protocol EukGe-2v5-450
| Sample_scan_protocol | Affymetrix GeneChip® Operating Software (GCOS) automates the control of GeneChip® Fluidics Stations and Scanners. In addition, GCOS acquires data, manages sample and experimental information, and performs gene expression data analysis.
| Sample_data_processing | For each microarray, probe set signal values were initially normalized by scaling to a target intensity of 125.
| Sample_platform_id | GPL1261
| Sample_contact_name | Lizhong,,Yang
| Sample_contact_email | lzyang@wsu.edu
| Sample_contact_phone | 1-509-335-2240
| Sample_contact_fax | 1-509-335-9688
| Sample_contact_laboratory | Griswold Lab/Center for Reproductive Biology
| Sample_contact_department | School of Molecular Biosciences
| Sample_contact_institute | Washington State University
| Sample_contact_address | 531 Fulmer Hall/POB 644660
| Sample_contact_city | Pullman
| Sample_contact_state | WA
| Sample_contact_zip/postal_code | 99164-4660
| Sample_contact_country | USA
| Sample_contact_web_link | http://www.wsu.edu/~griswold
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM324nnn/GSM324499/suppl/GSM324499.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM324nnn/GSM324499/suppl/GSM324499.chp.gz
| Sample_series_id | GSE12950
| Sample_data_row_count | 45101
| |
|
GSM324500 | GPL1261 |
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mtestis_MRL-MPJ_rep2
|
Murine testes of MRL/MpJ+/+ strain replicates 2
|
Gene expression profile of testes from three mouse strains, AKR/N, C57BL/6,MRL/MpJ+/+ (all mice used were 8 weeks old)
|
All methodolgy for this dataset was described in the manuscript of "Differential gene expression in the testes of different murine strains under normal and hyperthermic conditions"
|
Sample_geo_accession | GSM324500
| Sample_status | Public on Nov 01 2008
| Sample_submission_date | Sep 25 2008
| Sample_last_update_date | Sep 30 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | GeneChip Expression 3' - Amplification one-cycle cDNA synthesis kit (lpn-900431)
| Sample_hyb_protocol | Standard hybridization protocol using 15ug cRNA
| Sample_hyb_protocol | wash/stain protocol EukGe-2v5-450
| Sample_scan_protocol | Affymetrix GeneChip® Operating Software (GCOS) automates the control of GeneChip® Fluidics Stations and Scanners. In addition, GCOS acquires data, manages sample and experimental information, and performs gene expression data analysis.
| Sample_data_processing | For each microarray, probe set signal values were initially normalized by scaling to a target intensity of 125.
| Sample_platform_id | GPL1261
| Sample_contact_name | Lizhong,,Yang
| Sample_contact_email | lzyang@wsu.edu
| Sample_contact_phone | 1-509-335-2240
| Sample_contact_fax | 1-509-335-9688
| Sample_contact_laboratory | Griswold Lab/Center for Reproductive Biology
| Sample_contact_department | School of Molecular Biosciences
| Sample_contact_institute | Washington State University
| Sample_contact_address | 531 Fulmer Hall/POB 644660
| Sample_contact_city | Pullman
| Sample_contact_state | WA
| Sample_contact_zip/postal_code | 99164-4660
| Sample_contact_country | USA
| Sample_contact_web_link | http://www.wsu.edu/~griswold
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM324nnn/GSM324500/suppl/GSM324500.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM324nnn/GSM324500/suppl/GSM324500.chp.gz
| Sample_series_id | GSE12950
| Sample_data_row_count | 45101
| |
|
GSM324501 | GPL1261 |
|
mtestis_AKR-N_rep2
|
Murine testes of AKR/N strain replicates 2
|
Gene expression profile of testes from three mouse strains, AKR/N, C57BL/6,MRL/MpJ+/+ (all mice used were 8 weeks old)
|
All methodolgy for this dataset was described in the manuscript of "Differential gene expression in the testes of different murine strains under normal and hyperthermic conditions"
|
Sample_geo_accession | GSM324501
| Sample_status | Public on Nov 01 2008
| Sample_submission_date | Sep 25 2008
| Sample_last_update_date | Sep 30 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | GeneChip Expression 3' - Amplification one-cycle cDNA synthesis kit (lpn-900431)
| Sample_hyb_protocol | Standard hybridization protocol using 15ug cRNA
| Sample_hyb_protocol | wash/stain protocol EukGe-2v5-450
| Sample_scan_protocol | Affymetrix GeneChip® Operating Software (GCOS) automates the control of GeneChip® Fluidics Stations and Scanners. In addition, GCOS acquires data, manages sample and experimental information, and performs gene expression data analysis.
| Sample_data_processing | For each microarray, probe set signal values were initially normalized by scaling to a target intensity of 125.
| Sample_platform_id | GPL1261
| Sample_contact_name | Lizhong,,Yang
| Sample_contact_email | lzyang@wsu.edu
| Sample_contact_phone | 1-509-335-2240
| Sample_contact_fax | 1-509-335-9688
| Sample_contact_laboratory | Griswold Lab/Center for Reproductive Biology
| Sample_contact_department | School of Molecular Biosciences
| Sample_contact_institute | Washington State University
| Sample_contact_address | 531 Fulmer Hall/POB 644660
| Sample_contact_city | Pullman
| Sample_contact_state | WA
| Sample_contact_zip/postal_code | 99164-4660
| Sample_contact_country | USA
| Sample_contact_web_link | http://www.wsu.edu/~griswold
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM324nnn/GSM324501/suppl/GSM324501.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM324nnn/GSM324501/suppl/GSM324501.chp.gz
| Sample_series_id | GSE12950
| Sample_data_row_count | 45101
| |
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