Search results for the GEO ID: GSE12978 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM325351 | GPL1355 |
|
SFO Food deprivation 1
|
SFO Food deprivation
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Subfornical Organ
|
Sample represents the Subfornical organ from 5 food deprived SD animals
|
Sample_geo_accession | GSM325351
| Sample_status | Public on Oct 01 2008
| Sample_submission_date | Sep 30 2008
| Sample_last_update_date | Sep 30 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_treatment_protocol_ch1 | Animal was food deprived for 48 hours
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG (Eppendorf). RNA was further purified using RNeasy Minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent)
| Sample_label_ch1 | Amino allyl UTP (biotin)
| Sample_label_protocol_ch1 | MessegeAmp II aRNA amplification kit (Ambion). Protocol available at http://ambion.com/catalog/CatNum.php?1753
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325351/suppl/GSM325351.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325351/suppl/GSM325351.CHP.gz
| Sample_series_id | GSE12978
| Sample_data_row_count | 31099
| |
|
GSM325352 | GPL1355 |
|
SFO Food deprivation 2
|
SFO Food deprivation
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Subfornical Organ
|
Sample represents the Subfornical organ from 5 food deprived SD animals
|
Sample_geo_accession | GSM325352
| Sample_status | Public on Oct 01 2008
| Sample_submission_date | Sep 30 2008
| Sample_last_update_date | Sep 30 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_treatment_protocol_ch1 | Animal was food deprived for 48 hours
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG (Eppendorf). RNA was further purified using RNeasy Minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent)
| Sample_label_ch1 | Amino allyl UTP (biotin)
| Sample_label_protocol_ch1 | MessegeAmp II aRNA amplification kit (Ambion). Protocol available at http://ambion.com/catalog/CatNum.php?1753
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325352/suppl/GSM325352.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325352/suppl/GSM325352.CHP.gz
| Sample_series_id | GSE12978
| Sample_data_row_count | 31099
| |
|
GSM325353 | GPL1355 |
|
SFO Food deprivation 3
|
SFO Food deprivation
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Subfornical Organ
|
Sample represents the Subfornical organ from 5 food deprived SD animals
|
Sample_geo_accession | GSM325353
| Sample_status | Public on Oct 01 2008
| Sample_submission_date | Sep 30 2008
| Sample_last_update_date | Sep 30 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_treatment_protocol_ch1 | Animal was food deprived for 48 hours
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG (Eppendorf). RNA was further purified using RNeasy Minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent)
| Sample_label_ch1 | Amino allyl UTP (biotin)
| Sample_label_protocol_ch1 | MessegeAmp II aRNA amplification kit (Ambion). Protocol available at http://ambion.com/catalog/CatNum.php?1753
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325353/suppl/GSM325353.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325353/suppl/GSM325353.CHP.gz
| Sample_series_id | GSE12978
| Sample_data_row_count | 31099
| |
|
GSM325354 | GPL1355 |
|
SFO Food deprivation 4
|
SFO Food deprivation
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Subfornical Organ
|
Sample represents the Subfornical organ from 5 food deprived SD animals
|
Sample_geo_accession | GSM325354
| Sample_status | Public on Oct 01 2008
| Sample_submission_date | Sep 30 2008
| Sample_last_update_date | Sep 30 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_treatment_protocol_ch1 | Animal was food deprived for 48 hours
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG (Eppendorf). RNA was further purified using RNeasy Minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent)
| Sample_label_ch1 | Amino allyl UTP (biotin)
| Sample_label_protocol_ch1 | MessegeAmp II aRNA amplification kit (Ambion). Protocol available at http://ambion.com/catalog/CatNum.php?1753
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325354/suppl/GSM325354.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325354/suppl/GSM325354.CHP.gz
| Sample_series_id | GSE12978
| Sample_data_row_count | 31099
| |
|
GSM325355 | GPL1355 |
|
SFO Food deprivation 5
|
SFO Food deprivation
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Subfornical Organ
|
Sample represents the Subfornical organ from 5 food deprived SD animals
|
Sample_geo_accession | GSM325355
| Sample_status | Public on Oct 01 2008
| Sample_submission_date | Sep 30 2008
| Sample_last_update_date | Sep 30 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_treatment_protocol_ch1 | Animal was food deprived for 48 hours
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG (Eppendorf). RNA was further purified using RNeasy Minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent)
| Sample_label_ch1 | Amino allyl UTP (biotin)
| Sample_label_protocol_ch1 | MessegeAmp II aRNA amplification kit (Ambion). Protocol available at http://ambion.com/catalog/CatNum.php?1753
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325355/suppl/GSM325355.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325355/suppl/GSM325355.CHP.gz
| Sample_series_id | GSE12978
| Sample_data_row_count | 31099
| |
|
GSM325356 | GPL1355 |
|
SFO Water deprivation 1
|
SFO Water deprivation
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Subfornical Organ
|
Sample represents the Subfornical organ from 5 water deprived SD animals
|
Sample_geo_accession | GSM325356
| Sample_status | Public on Oct 01 2008
| Sample_submission_date | Sep 30 2008
| Sample_last_update_date | Sep 30 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG (Eppendorf). RNA was further purified using RNeasy Minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent)
| Sample_label_ch1 | Amino allyl UTP (biotin)
| Sample_label_protocol_ch1 | MessegeAmp II aRNA amplification kit (Ambion). Protocol available at http://ambion.com/catalog/CatNum.php?1753
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325356/suppl/GSM325356.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325356/suppl/GSM325356.CHP.gz
| Sample_series_id | GSE12978
| Sample_data_row_count | 31099
| |
|
GSM325357 | GPL1355 |
|
SFO Water deprivation 2
|
SFO Water deprivation
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Subfornical Organ
|
Sample represents the Subfornical organ from 5 water deprived SD animals
|
Sample_geo_accession | GSM325357
| Sample_status | Public on Oct 01 2008
| Sample_submission_date | Sep 30 2008
| Sample_last_update_date | Sep 30 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG (Eppendorf). RNA was further purified using RNeasy Minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent)
| Sample_label_ch1 | Amino allyl UTP (biotin)
| Sample_label_protocol_ch1 | MessegeAmp II aRNA amplification kit (Ambion). Protocol available at http://ambion.com/catalog/CatNum.php?1753
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325357/suppl/GSM325357.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325357/suppl/GSM325357.CHP.gz
| Sample_series_id | GSE12978
| Sample_data_row_count | 31099
| |
|
GSM325361 | GPL1355 |
|
SFO Water deprivation 3
|
SFO Water deprivation
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Subfornical Organ
|
Sample represents the Subfornical organ from 5 water deprived SD animals
|
Sample_geo_accession | GSM325361
| Sample_status | Public on Oct 01 2008
| Sample_submission_date | Sep 30 2008
| Sample_last_update_date | Sep 30 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG (Eppendorf). RNA was further purified using RNeasy Minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent)
| Sample_label_ch1 | Amino allyl UTP (biotin)
| Sample_label_protocol_ch1 | MessegeAmp II aRNA amplification kit (Ambion). Protocol available at http://ambion.com/catalog/CatNum.php?1753
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325361/suppl/GSM325361.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325361/suppl/GSM325361.CHP.gz
| Sample_series_id | GSE12978
| Sample_data_row_count | 31099
| |
|
GSM325362 | GPL1355 |
|
SFO Water deprivation 4
|
SFO Water deprivation
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Subfornical Organ
|
Sample represents the Subfornical organ from 5 water deprived SD animals
|
Sample_geo_accession | GSM325362
| Sample_status | Public on Oct 01 2008
| Sample_submission_date | Sep 30 2008
| Sample_last_update_date | Sep 30 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG (Eppendorf). RNA was further purified using RNeasy Minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent)
| Sample_label_ch1 | Amino allyl UTP (biotin)
| Sample_label_protocol_ch1 | MessegeAmp II aRNA amplification kit (Ambion). Protocol available at http://ambion.com/catalog/CatNum.php?1753
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325362/suppl/GSM325362.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325362/suppl/GSM325362.CHP.gz
| Sample_series_id | GSE12978
| Sample_data_row_count | 31099
| |
|
GSM325364 | GPL1355 |
|
SFO Water deprivation 5
|
SFO Water deprivation
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Subfornical Organ
|
Sample represents the Subfornical organ from 5 water deprived SD animals
|
Sample_geo_accession | GSM325364
| Sample_status | Public on Oct 01 2008
| Sample_submission_date | Sep 30 2008
| Sample_last_update_date | Sep 30 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG (Eppendorf). RNA was further purified using RNeasy Minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent)
| Sample_label_ch1 | Amino allyl UTP (biotin)
| Sample_label_protocol_ch1 | MessegeAmp II aRNA amplification kit (Ambion). Protocol available at http://ambion.com/catalog/CatNum.php?1753
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325364/suppl/GSM325364.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325364/suppl/GSM325364.CHP.gz
| Sample_series_id | GSE12978
| Sample_data_row_count | 31099
| |
|
GSM325366 | GPL1355 |
|
SFO Control 1
|
SFO Control
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Subfornical Organ
|
Sample represents the Subfornical organ from 5 untreated SD animals
|
Sample_geo_accession | GSM325366
| Sample_status | Public on Oct 01 2008
| Sample_submission_date | Sep 30 2008
| Sample_last_update_date | Sep 30 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG (Eppendorf). RNA was further purified using RNeasy Minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent)
| Sample_label_ch1 | Amino allyl UTP (biotin)
| Sample_label_protocol_ch1 | MessegeAmp II aRNA amplification kit (Ambion). Protocol available at http://ambion.com/catalog/CatNum.php?1753
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325366/suppl/GSM325366.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325366/suppl/GSM325366.CHP.gz
| Sample_series_id | GSE12978
| Sample_data_row_count | 31099
| |
|
GSM325367 | GPL1355 |
|
SFO Control 2
|
SFO Control
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Subfornical Organ
|
Sample represents the Subfornical organ from 5 untreated SD animals
|
Sample_geo_accession | GSM325367
| Sample_status | Public on Oct 01 2008
| Sample_submission_date | Sep 30 2008
| Sample_last_update_date | Sep 30 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG (Eppendorf). RNA was further purified using RNeasy Minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent)
| Sample_label_ch1 | Amino allyl UTP (biotin)
| Sample_label_protocol_ch1 | MessegeAmp II aRNA amplification kit (Ambion). Protocol available at http://ambion.com/catalog/CatNum.php?1753
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325367/suppl/GSM325367.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325367/suppl/GSM325367.CHP.gz
| Sample_series_id | GSE12978
| Sample_data_row_count | 31099
| |
|
GSM325368 | GPL1355 |
|
SFO Control 3
|
SFO Control
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Subfornical Organ
|
Sample represents the Subfornical organ from 5 untreated SD animals
|
Sample_geo_accession | GSM325368
| Sample_status | Public on Oct 01 2008
| Sample_submission_date | Sep 30 2008
| Sample_last_update_date | Sep 30 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG (Eppendorf). RNA was further purified using RNeasy Minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent)
| Sample_label_ch1 | Amino allyl UTP (biotin)
| Sample_label_protocol_ch1 | MessegeAmp II aRNA amplification kit (Ambion). Protocol available at http://ambion.com/catalog/CatNum.php?1753
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325368/suppl/GSM325368.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325368/suppl/GSM325368.CHP.gz
| Sample_series_id | GSE12978
| Sample_data_row_count | 31099
| |
|
GSM325369 | GPL1355 |
|
SFO Control 4
|
SFO Control
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Subfornical Organ
|
Sample represents the Subfornical organ from 5 untreated SD animals
|
Sample_geo_accession | GSM325369
| Sample_status | Public on Oct 01 2008
| Sample_submission_date | Sep 30 2008
| Sample_last_update_date | Sep 30 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG (Eppendorf). RNA was further purified using RNeasy Minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent)
| Sample_label_ch1 | Amino allyl UTP (biotin)
| Sample_label_protocol_ch1 | MessegeAmp II aRNA amplification kit (Ambion). Protocol available at http://ambion.com/catalog/CatNum.php?1753
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325369/suppl/GSM325369.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325369/suppl/GSM325369.CHP.gz
| Sample_series_id | GSE12978
| Sample_data_row_count | 31099
| |
|
GSM325370 | GPL1355 |
|
SFO Control 5
|
SFO Control
|
Strain: Sprague Dawley
Gender: Male
Age: 10-12 weeks
Tissue: Subfornical Organ
|
Sample represents the Subfornical organ from 5 untreated SD animals
|
Sample_geo_accession | GSM325370
| Sample_status | Public on Oct 01 2008
| Sample_submission_date | Sep 30 2008
| Sample_last_update_date | Sep 30 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Tissue was dissected in an RNase free manner and stored in RNAlater (Ambion) at -20C for no more than 1 month. Homogenisation in QIAzol was conducted mechanically and the aqueous phase separated using a PLG (Eppendorf). RNA was further purified using RNeasy Minelute cleanup kit (Qiagen). RNA quality was confirmed using nanodrop and bioanylizer 2100 (Agilent)
| Sample_label_ch1 | Amino allyl UTP (biotin)
| Sample_label_protocol_ch1 | MessegeAmp II aRNA amplification kit (Ambion). Protocol available at http://ambion.com/catalog/CatNum.php?1753
| Sample_hyb_protocol | Standard Affymetrix procedures
| Sample_scan_protocol | Standard Affymetrix procedures
| Sample_data_processing | GCOS version 1.2
| Sample_platform_id | GPL1355
| Sample_contact_name | DAVID,,MURPHY
| Sample_contact_laboratory | Laboratories for Integrative Neuroscience and Endocrinolgy
| Sample_contact_department | Medicine and Dentistry
| Sample_contact_institute | University of Bristol
| Sample_contact_address | Whitson Street
| Sample_contact_city | Bristol
| Sample_contact_state | AVON
| Sample_contact_zip/postal_code | BS1 3NY
| Sample_contact_country | United Kingdom
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325370/suppl/GSM325370.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM325nnn/GSM325370/suppl/GSM325370.CHP.gz
| Sample_series_id | GSE12978
| Sample_data_row_count | 31099
| |
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