Search results for the GEO ID: GSE13074 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM327414 | GPL1261 |
|
Dark adapted RPE control replicate 1
|
BALBc mouse RPE RNA, dark adapted
|
RPE RNA from BALBc mouse, dark adapted
|
Dark adapted control replicate 1
contact Amir Rattner (arattne1@jhmi.edu) for details
|
Sample_geo_accession | GSM327414
| Sample_status | Public on Oct 07 2008
| Sample_submission_date | Oct 06 2008
| Sample_last_update_date | Oct 07 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA from RPE was extracted with Trizol (Invitrogen, Carlsbad, CA) and the RNeasy Mini kit (Qiagen, Valencia, CA).
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix small sample labeling protocol VII
| Sample_label_protocol_ch1 | Johns Hopkins Microarray Core Facility
| Sample_label_protocol_ch1 | http://www.microarray.jhmi.edu/
| Sample_hyb_protocol | Affymetrix protocol
| Sample_hyb_protocol | Johns Hopkins Microarray Core Facility
| Sample_hyb_protocol | http://www.microarray.jhmi.edu/
| Sample_scan_protocol | Affymetrix protocol
| Sample_scan_protocol | Johns Hopkins Microarray Core Facility
| Sample_scan_protocol | http://www.microarray.jhmi.edu/
| Sample_data_processing | RMA (bioconductor)
| Sample_platform_id | GPL1261
| Sample_contact_name | Amir,,Rattner
| Sample_contact_email | arattne1@jhmi.edu
| Sample_contact_phone | 410-955-4678
| Sample_contact_fax | 410-614-0728
| Sample_contact_department | Molecular Biology and Genetics
| Sample_contact_institute | Johns Hopkins University
| Sample_contact_address | 725 North Wolfe St., PCTB Room 805
| Sample_contact_city | Baltimore
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 21205
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM327nnn/GSM327414/suppl/GSM327414.CEL.gz
| Sample_series_id | GSE13074
| Sample_data_row_count | 45101
| |
|
GSM327417 | GPL1261 |
|
Dark adapted RPE control replicate 2
|
BALBc mouse RPE RNA, dark adapted
|
RPE RNA from BALBc mouse, dark adapted
|
Dark adapted control replicate 2
contact Amir Rattner (arattne1@jhmi.edu) for details
|
Sample_geo_accession | GSM327417
| Sample_status | Public on Oct 07 2008
| Sample_submission_date | Oct 06 2008
| Sample_last_update_date | Oct 07 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA from RPE was extracted with Trizol (Invitrogen, Carlsbad, CA) and the RNeasy Mini kit (Qiagen, Valencia, CA).
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix small sample labeling protocol VII
| Sample_label_protocol_ch1 | Johns Hopkins Microarray Core Facility
| Sample_label_protocol_ch1 | http://www.microarray.jhmi.edu/
| Sample_hyb_protocol | Affymetrix protocol
| Sample_hyb_protocol | Johns Hopkins Microarray Core Facility
| Sample_hyb_protocol | http://www.microarray.jhmi.edu/
| Sample_scan_protocol | Affymetrix protocol
| Sample_scan_protocol | Johns Hopkins Microarray Core Facility
| Sample_scan_protocol | http://www.microarray.jhmi.edu/
| Sample_data_processing | RMA (bioconductor)
| Sample_platform_id | GPL1261
| Sample_contact_name | Amir,,Rattner
| Sample_contact_email | arattne1@jhmi.edu
| Sample_contact_phone | 410-955-4678
| Sample_contact_fax | 410-614-0728
| Sample_contact_department | Molecular Biology and Genetics
| Sample_contact_institute | Johns Hopkins University
| Sample_contact_address | 725 North Wolfe St., PCTB Room 805
| Sample_contact_city | Baltimore
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 21205
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM327nnn/GSM327417/suppl/GSM327417.CEL.gz
| Sample_series_id | GSE13074
| Sample_data_row_count | 45101
| |
|
GSM327419 | GPL1261 |
|
Dark adapted RPE control replicate 3
|
BALBc mouse RPE RNA, dark adapted
|
RPE RNA from BALBc mouse, dark adapted
|
Dark adapted control replicate 3
contact Amir Rattner (arattne1@jhmi.edu) for details
|
Sample_geo_accession | GSM327419
| Sample_status | Public on Oct 07 2008
| Sample_submission_date | Oct 06 2008
| Sample_last_update_date | Oct 15 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA from RPE was extracted with Trizol (Invitrogen, Carlsbad, CA) and the RNeasy Mini kit (Qiagen, Valencia, CA).
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix small sample labeling protocol VII
| Sample_label_protocol_ch1 | Johns Hopkins Microarray Core Facility
| Sample_label_protocol_ch1 | http://www.microarray.jhmi.edu/
| Sample_hyb_protocol | Affymetrix protocol
| Sample_hyb_protocol | Johns Hopkins Microarray Core Facility
| Sample_hyb_protocol | http://www.microarray.jhmi.edu/
| Sample_scan_protocol | Affymetrix protocol
| Sample_scan_protocol | Johns Hopkins Microarray Core Facility
| Sample_scan_protocol | http://www.microarray.jhmi.edu/
| Sample_data_processing | RMA (bioconductor)
| Sample_platform_id | GPL1261
| Sample_contact_name | Amir,,Rattner
| Sample_contact_email | arattne1@jhmi.edu
| Sample_contact_phone | 410-955-4678
| Sample_contact_fax | 410-614-0728
| Sample_contact_department | Molecular Biology and Genetics
| Sample_contact_institute | Johns Hopkins University
| Sample_contact_address | 725 North Wolfe St., PCTB Room 805
| Sample_contact_city | Baltimore
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 21205
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM327nnn/GSM327419/suppl/GSM327419.CEL.gz
| Sample_series_id | GSE13074
| Sample_data_row_count | 45101
| |
|
GSM327420 | GPL1261 |
|
Light damage RPE replicate 1
|
BALBc mouse RPE RNA, light damaged
|
RPE RNA from BALBc mice, light damaged for 1.5 hours under 6,000 lux white fluorescent light and allowed to recover for 24 hours in the dark.
|
Light damaged replicate 1
contact Amir Rattner (arattne1@jhmi.edu) for details
|
Sample_geo_accession | GSM327420
| Sample_status | Public on Oct 07 2008
| Sample_submission_date | Oct 06 2008
| Sample_last_update_date | Oct 07 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA from RPE was extracted with Trizol (Invitrogen, Carlsbad, CA) and the RNeasy Mini kit (Qiagen, Valencia, CA).
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix small sample labeling protocol VII
| Sample_label_protocol_ch1 | Johns Hopkins Microarray Core Facility
| Sample_label_protocol_ch1 | http://www.microarray.jhmi.edu/
| Sample_hyb_protocol | Affymetrix protocol
| Sample_hyb_protocol | Johns Hopkins Microarray Core Facility
| Sample_hyb_protocol | http://www.microarray.jhmi.edu/
| Sample_scan_protocol | Affymetrix protocol
| Sample_scan_protocol | Johns Hopkins Microarray Core Facility
| Sample_scan_protocol | http://www.microarray.jhmi.edu/
| Sample_data_processing | RMA (bioconductor)
| Sample_platform_id | GPL1261
| Sample_contact_name | Amir,,Rattner
| Sample_contact_email | arattne1@jhmi.edu
| Sample_contact_phone | 410-955-4678
| Sample_contact_fax | 410-614-0728
| Sample_contact_department | Molecular Biology and Genetics
| Sample_contact_institute | Johns Hopkins University
| Sample_contact_address | 725 North Wolfe St., PCTB Room 805
| Sample_contact_city | Baltimore
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 21205
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM327nnn/GSM327420/suppl/GSM327420.CEL.gz
| Sample_series_id | GSE13074
| Sample_data_row_count | 45101
| |
|
GSM327421 | GPL1261 |
|
Light damage RPE replicate 2
|
BALBc mouse RPE RNA, light damaged
|
RPE RNA from BALBc mice, light damaged for 1.5 hours under 6,000 lux white fluorescent light and allowed to recover for 24 hours in the dark.
|
Light damaged replicate 2
contact Amir Rattner (arattne1@jhmi.edu) for details
|
Sample_geo_accession | GSM327421
| Sample_status | Public on Oct 07 2008
| Sample_submission_date | Oct 06 2008
| Sample_last_update_date | Oct 07 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA from RPE was extracted with Trizol (Invitrogen, Carlsbad, CA) and the RNeasy Mini kit (Qiagen, Valencia, CA).
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix small sample labeling protocol VII
| Sample_label_protocol_ch1 | Johns Hopkins Microarray Core Facility
| Sample_label_protocol_ch1 | http://www.microarray.jhmi.edu/
| Sample_hyb_protocol | Affymetrix protocol
| Sample_hyb_protocol | Johns Hopkins Microarray Core Facility
| Sample_hyb_protocol | http://www.microarray.jhmi.edu/
| Sample_scan_protocol | Affymetrix protocol
| Sample_scan_protocol | Johns Hopkins Microarray Core Facility
| Sample_scan_protocol | http://www.microarray.jhmi.edu/
| Sample_data_processing | RMA (bioconductor)
| Sample_platform_id | GPL1261
| Sample_contact_name | Amir,,Rattner
| Sample_contact_email | arattne1@jhmi.edu
| Sample_contact_phone | 410-955-4678
| Sample_contact_fax | 410-614-0728
| Sample_contact_department | Molecular Biology and Genetics
| Sample_contact_institute | Johns Hopkins University
| Sample_contact_address | 725 North Wolfe St., PCTB Room 805
| Sample_contact_city | Baltimore
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 21205
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM327nnn/GSM327421/suppl/GSM327421.CEL.gz
| Sample_series_id | GSE13074
| Sample_data_row_count | 45101
| |
|
GSM327422 | GPL1261 |
|
Light damage RPE replicate 3
|
BALBc mouse RPE RNA, light damaged
|
RPE RNA from BALBc mice, light damaged for 1.5 hours under 6,000 lux white fluorescent light and allowed to recover for 24 hours in the dark.
|
Light damaged replicate 3
contact Amir Rattner (arattne1@jhmi.edu) for details
|
Sample_geo_accession | GSM327422
| Sample_status | Public on Oct 07 2008
| Sample_submission_date | Oct 06 2008
| Sample_last_update_date | Oct 07 2008
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA from RPE was extracted with Trizol (Invitrogen, Carlsbad, CA) and the RNeasy Mini kit (Qiagen, Valencia, CA).
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix small sample labeling protocol VII
| Sample_label_protocol_ch1 | Johns Hopkins Microarray Core Facility
| Sample_label_protocol_ch1 | http://www.microarray.jhmi.edu/
| Sample_hyb_protocol | Affymetrix protocol
| Sample_hyb_protocol | Johns Hopkins Microarray Core Facility
| Sample_hyb_protocol | http://www.microarray.jhmi.edu/
| Sample_scan_protocol | Affymetrix protocol
| Sample_scan_protocol | Johns Hopkins Microarray Core Facility
| Sample_scan_protocol | http://www.microarray.jhmi.edu/
| Sample_data_processing | RMA (bioconductor)
| Sample_platform_id | GPL1261
| Sample_contact_name | Amir,,Rattner
| Sample_contact_email | arattne1@jhmi.edu
| Sample_contact_phone | 410-955-4678
| Sample_contact_fax | 410-614-0728
| Sample_contact_department | Molecular Biology and Genetics
| Sample_contact_institute | Johns Hopkins University
| Sample_contact_address | 725 North Wolfe St., PCTB Room 805
| Sample_contact_city | Baltimore
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 21205
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM327nnn/GSM327422/suppl/GSM327422.CEL.gz
| Sample_series_id | GSE13074
| Sample_data_row_count | 45101
| |
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