Search results for the GEO ID: GSE1317 |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM21706 | GPL96 |
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Normal basal cell - 0mJ
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Human skin; normal
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This data set was generated as part of Biogen Community Lab's science fair mentorship program. In brief, human basal cells (ATCC: CRL-7761, designation TE 353.Sk) were cultured to 80% confluence. After removing media, cells were treated with a titration of ultraviolet light (Biorad GS GeneLinker, 254 nm energy maximum). Media was then added and cells were grown for 24 hours. Total RNA was harvested using RLT buffer and Qiagen RNeasy kit. 5 ug of total RNA was labeled using standard Affymetrix protocols for Eukaryotic target preparation (GeneChip Expression Analysis Technical Manual Revision 4).
Keywords = UV
Keywords = ultraviolet
Keywords = basal cell
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Sample_geo_accession | GSM21706
| Sample_status | Public on Apr 17 2004
| Sample_submission_date | Apr 15 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL96
| Sample_contact_name | Jeff,,Shearstone
| Sample_contact_email | jeff.shearstone@biogenidec.com
| Sample_contact_phone | 617-679-3287
| Sample_contact_laboratory | Transcriptional Profiling
| Sample_contact_department | Research
| Sample_contact_institute | Biogen Idec
| Sample_contact_address | 14 Cambridge Center
| Sample_contact_city | Cambridge
| Sample_contact_state | MA
| Sample_contact_zip/postal_code | 02445
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM21nnn/GSM21706/suppl/GSM21706.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM21nnn/GSM21706/suppl/GSM21706.DAT.gz
| Sample_series_id | GSE1317
| Sample_data_row_count | 22283
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GSM21707 | GPL96 |
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Normal basal cell - 20mJ
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Human skin; normal
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This data set was generated as part of Biogen Community Lab's science fair mentorship program. In brief, human basal cells (ATCC: CRL-7761, designation TE 353.Sk) were cultured to 80% confluence. After removing media, cells were treated with a titration of ultraviolet light (Biorad GS GeneLinker, 254 nm energy maximum). Media was then added and cells were grown for 24 hours. Total RNA was harvested using RLT buffer and Qiagen RNeasy kit. 5 ug of total RNA was labeled using standard Affymetrix protocols for Eukaryotic target preparation (GeneChip Expression Analysis Technical Manual Revision 4).
Keywords = UV
Keywords = ultraviolet
Keywords = basal cell
|
Sample_geo_accession | GSM21707
| Sample_status | Public on Apr 17 2004
| Sample_submission_date | Apr 15 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL96
| Sample_contact_name | Jeff,,Shearstone
| Sample_contact_email | jeff.shearstone@biogenidec.com
| Sample_contact_phone | 617-679-3287
| Sample_contact_laboratory | Transcriptional Profiling
| Sample_contact_department | Research
| Sample_contact_institute | Biogen Idec
| Sample_contact_address | 14 Cambridge Center
| Sample_contact_city | Cambridge
| Sample_contact_state | MA
| Sample_contact_zip/postal_code | 02445
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM21nnn/GSM21707/suppl/GSM21707.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM21nnn/GSM21707/suppl/GSM21707.DAT.gz
| Sample_series_id | GSE1317
| Sample_data_row_count | 22283
| |
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GSM21708 | GPL96 |
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Normal basal cell - 40mJ
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Human skin; normal
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|
This data set was generated as part of Biogen Community Lab's science fair mentorship program. In brief, human basal cells (ATCC: CRL-7761, designation TE 353.Sk) were cultured to 80% confluence. After removing media, cells were treated with a titration of ultraviolet light (Biorad GS GeneLinker, 254 nm energy maximum). Media was then added and cells were grown for 24 hours. Total RNA was harvested using RLT buffer and Qiagen RNeasy kit. 5 ug of total RNA was labeled using standard Affymetrix protocols for Eukaryotic target preparation (GeneChip Expression Analysis Technical Manual Revision 4).
Keywords = UV
Keywords = ultraviolet
Keywords = basal cell
|
Sample_geo_accession | GSM21708
| Sample_status | Public on Apr 17 2004
| Sample_submission_date | Apr 15 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL96
| Sample_contact_name | Jeff,,Shearstone
| Sample_contact_email | jeff.shearstone@biogenidec.com
| Sample_contact_phone | 617-679-3287
| Sample_contact_laboratory | Transcriptional Profiling
| Sample_contact_department | Research
| Sample_contact_institute | Biogen Idec
| Sample_contact_address | 14 Cambridge Center
| Sample_contact_city | Cambridge
| Sample_contact_state | MA
| Sample_contact_zip/postal_code | 02445
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM21nnn/GSM21708/suppl/GSM21708.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM21nnn/GSM21708/suppl/GSM21708.DAT.gz
| Sample_series_id | GSE1317
| Sample_data_row_count | 22283
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