Search results for the GEO ID: GSE13524  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM341183 | GPL1355 |
|
Acb_Continuous_ethanol-rep1
|
Nucleus accumbens shell from P rat exposed to continuous ethanol
|
P rat
exposed to continuous ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341183
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341183/suppl/GSM341183.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341184 | GPL1355 |
|
Acb_Continuous_ethanol-rep2
|
Nucleus accumbens shell from P rat exposed to continuous ethanol
|
P rat
exposed to continuous ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341184
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341184/suppl/GSM341184.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341185 | GPL1355 |
|
Acb_Continuous_ethanol-rep3
|
Nucleus accumbens shell from P rat exposed to continuous ethanol
|
P rat
exposed to continuous ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341185
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341185/suppl/GSM341185.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341186 | GPL1355 |
|
Acb_Continuous_ethanol-rep4
|
Nucleus accumbens shell from P rat exposed to continuous ethanol
|
P rat
exposed to continuous ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341186
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341186/suppl/GSM341186.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341187 | GPL1355 |
|
Acb_Continuous_ethanol-rep5
|
Nucleus accumbens shell from P rat exposed to continuous ethanol
|
P rat
exposed to continuous ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341187
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341187/suppl/GSM341187.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341188 | GPL1355 |
|
Acb_Continuous_ethanol-rep6
|
Nucleus accumbens shell from P rat exposed to continuous ethanol
|
P rat
exposed to continuous ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341188
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341188/suppl/GSM341188.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341189 | GPL1355 |
|
Acb_Continuous_ethanol-rep7
|
Nucleus accumbens shell from P rat exposed to continuous ethanol
|
P rat
exposed to continuous ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341189
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341189/suppl/GSM341189.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341190 | GPL1355 |
|
Acb_Continuous_ethanol-rep8
|
Nucleus accumbens shell from P rat exposed to continuous ethanol
|
P rat
exposed to continuous ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341190
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341190/suppl/GSM341190.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341191 | GPL1355 |
|
Acb_Continuous_ethanol-rep9
|
Nucleus accumbens shell from P rat exposed to continuous ethanol
|
P rat
exposed to continuous ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341191
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341191/suppl/GSM341191.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341192 | GPL1355 |
|
Acb_Continuous_ethanol-rep10
|
Nucleus accumbens shell from P rat exposed to continuous ethanol
|
P rat
exposed to continuous ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341192
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341192/suppl/GSM341192.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341193 | GPL1355 |
|
Acb_Limited_Ethanol-rep1
|
Nucleus accumbens shell from P rat with access to limited ethanol
|
P rat
access to limited ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341193
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341193/suppl/GSM341193.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341194 | GPL1355 |
|
Acb_Limited_Ethanol-rep2
|
Nucleus accumbens shell from P rat with access to limited ethanol
|
P rat
access to limited ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341194
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341194/suppl/GSM341194.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341195 | GPL1355 |
|
Acb_Limited_Ethanol-rep3
|
Nucleus accumbens shell from P rat with access to limited ethanol
|
P rat
access to limited ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341195
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341195/suppl/GSM341195.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341196 | GPL1355 |
|
Acb_Limited_Ethanol-rep4
|
Nucleus accumbens shell from P rat with access to limited ethanol
|
P rat
access to limited ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341196
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341196/suppl/GSM341196.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341197 | GPL1355 |
|
Acb_Limited_Ethanol-rep5
|
Nucleus accumbens shell from P rat with access to limited ethanol
|
P rat
access to limited ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341197
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341197/suppl/GSM341197.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341198 | GPL1355 |
|
Acb_Limited_Ethanol-rep6
|
Nucleus accumbens shell from P rat with access to limited ethanol
|
P rat
access to limited ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341198
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341198/suppl/GSM341198.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341199 | GPL1355 |
|
Acb_Limited_Ethanol-rep7
|
Nucleus accumbens shell from P rat with access to limited ethanol
|
P rat
access to limited ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341199
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341199/suppl/GSM341199.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341200 | GPL1355 |
|
Acb_Limited_Ethanol-rep8
|
Nucleus accumbens shell from P rat with access to limited ethanol
|
P rat
access to limited ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341200
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341200/suppl/GSM341200.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341201 | GPL1355 |
|
Acb_Limited_Ethanol-rep9
|
Nucleus accumbens shell from P rat with access to limited ethanol
|
P rat
access to limited ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341201
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341201/suppl/GSM341201.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341202 | GPL1355 |
|
Acb_Limited_Ethanol-rep10
|
Nucleus accumbens shell from P rat with access to limited ethanol
|
P rat
access to limited ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341202
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341202/suppl/GSM341202.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341203 | GPL1355 |
|
Acb_Water_only-rep1
|
Nucleus accumbens shell from P rat with no ethanol
|
P rat
no ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341203
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341203/suppl/GSM341203.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341204 | GPL1355 |
|
Acb_Water_only-rep2
|
Nucleus accumbens shell from P rat with no ethanol
|
P rat
no ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341204
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341204/suppl/GSM341204.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341205 | GPL1355 |
|
Acb_Water_only-rep3
|
Nucleus accumbens shell from P rat with no ethanol
|
P rat
no ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341205
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341205/suppl/GSM341205.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341206 | GPL1355 |
|
Acb_Water_only-rep4
|
Nucleus accumbens shell from P rat with no ethanol
|
P rat
no ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341206
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341206/suppl/GSM341206.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341207 | GPL1355 |
|
Acb_Water_only-rep5
|
Nucleus accumbens shell from P rat with no ethanol
|
P rat
no ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341207
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341207/suppl/GSM341207.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341208 | GPL1355 |
|
Acb_Water_only-rep6
|
Nucleus accumbens shell from P rat with no ethanol
|
P rat
no ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341208
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341208/suppl/GSM341208.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341209 | GPL1355 |
|
Acb_Water_only-rep7
|
Nucleus accumbens shell from P rat with no ethanol
|
P rat
no ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341209
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341209/suppl/GSM341209.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341210 | GPL1355 |
|
Acb_Water_only-rep8
|
Nucleus accumbens shell from P rat with no ethanol
|
P rat
no ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341210
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341210/suppl/GSM341210.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
GSM341211 | GPL1355 |
|
Acb_Water_only-rep9
|
Nucleus accumbens shell from P rat with no ethanol
|
P rat
no ethanol
|
Gene expression data from brain nucleus accumbens shell
|
| Sample_geo_accession | GSM341211
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Nov 07 2008
| | Sample_last_update_date | Nov 10 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol followed by Qiagen RNeasy mini kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 2 ug total RNA (Expression Analysis Technical Manual, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| | Sample_data_processing | The data were analyzed with RMA
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Mark,William,Kimpel
| | Sample_contact_email | mkimpel@iupui.edu
| | Sample_contact_laboratory | W.J. McBride
| | Sample_contact_department | Psychiatry
| | Sample_contact_institute | Indiana University
| | Sample_contact_address | 15032 Hunter Court
| | Sample_contact_city | Westfield
| | Sample_contact_state | IN
| | Sample_contact_zip/postal_code | 46074
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341211/suppl/GSM341211.CEL.gz
| | Sample_series_id | GSE13524
| | Sample_data_row_count | 31099
| | |
|
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Make groups for comparisons |
(2 groups will be compared at a time) |
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| Select GSMs and click on "Add groups" |
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