Search results for the GEO ID: GSE13579 |
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(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM341650 | GPL1261 |
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Expression profiling of Clock mutant dorsal skin_rep1
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Clock mutant dorsal skin at P23, biological replicate 1
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Age: postnatal day 23
Gender: male
Tissue: dorsal skin
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Hair cycle staging: telogen
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Sample_geo_accession | GSM341650
| Sample_status | Public on Jul 17 2009
| Sample_submission_date | Nov 12 2008
| Sample_last_update_date | Jul 17 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 11 ug total RNA (Expression Analysis Technical Manual, 2004, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, cRNA were hybridized on GeneChip Drosophila Genome Array using manufacturer's standard protocol. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| Sample_scan_protocol | GeneChips were scanned using GeneChip 3000 Scanner 7G.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| Sample_platform_id | GPL1261
| Sample_contact_name | Kevin,K,Lin
| Sample_contact_email | kklin@alumni.uci.edu
| Sample_contact_laboratory | Bogi Andersen
| Sample_contact_department | Biological Chemistry & Medicine
| Sample_contact_institute | University of California, Irvine
| Sample_contact_address | 250 Sprague Hall
| Sample_contact_city | Irvine
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 92697-4030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341650/suppl/GSM341650.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341650/suppl/GSM341650.CHP.gz
| Sample_series_id | GSE13579
| Sample_data_row_count | 45101
| |
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GSM341653 | GPL1261 |
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Expression profiling of Clock mutant dorsal skin_rep2
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Clock mutant dorsal skin at P23, biological replicate 2
|
Age: postnatal day 23
Gender: female
Tissue: dorsal skin
|
Hair cycle staging: telogen
|
Sample_geo_accession | GSM341653
| Sample_status | Public on Jul 17 2009
| Sample_submission_date | Nov 12 2008
| Sample_last_update_date | Jul 17 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 11 ug total RNA (Expression Analysis Technical Manual, 2004, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, cRNA were hybridized on GeneChip Drosophila Genome Array using manufacturer's standard protocol. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| Sample_scan_protocol | GeneChips were scanned using GeneChip 3000 Scanner 7G.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| Sample_platform_id | GPL1261
| Sample_contact_name | Kevin,K,Lin
| Sample_contact_email | kklin@alumni.uci.edu
| Sample_contact_laboratory | Bogi Andersen
| Sample_contact_department | Biological Chemistry & Medicine
| Sample_contact_institute | University of California, Irvine
| Sample_contact_address | 250 Sprague Hall
| Sample_contact_city | Irvine
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 92697-4030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341653/suppl/GSM341653.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341653/suppl/GSM341653.CHP.gz
| Sample_series_id | GSE13579
| Sample_data_row_count | 45101
| |
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GSM341655 | GPL1261 |
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Expression profiling of WT littermate dorsal skin_rep1
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WT dorsal skin at P23, biological replicate 1
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Age: postnatal day 23
Gender: female
Tissue: dorsal skin
|
Hair cycle staging: telogen
|
Sample_geo_accession | GSM341655
| Sample_status | Public on Jul 17 2009
| Sample_submission_date | Nov 12 2008
| Sample_last_update_date | Jul 17 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 11 ug total RNA (Expression Analysis Technical Manual, 2004, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, cRNA were hybridized on GeneChip Drosophila Genome Array using manufacturer's standard protocol. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| Sample_scan_protocol | GeneChips were scanned using GeneChip 3000 Scanner 7G.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| Sample_platform_id | GPL1261
| Sample_contact_name | Kevin,K,Lin
| Sample_contact_email | kklin@alumni.uci.edu
| Sample_contact_laboratory | Bogi Andersen
| Sample_contact_department | Biological Chemistry & Medicine
| Sample_contact_institute | University of California, Irvine
| Sample_contact_address | 250 Sprague Hall
| Sample_contact_city | Irvine
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 92697-4030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341655/suppl/GSM341655.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341655/suppl/GSM341655.CHP.gz
| Sample_series_id | GSE13579
| Sample_data_row_count | 45101
| |
|
GSM341657 | GPL1261 |
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Expression profiling of WT littermate dorsal skin_rep2
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WT dorsal skin at P23, biological replicate 2
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Age: postnatal day 23
Gender: female
Tissue: dorsal skin
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Hair cycle staging: telogen
|
Sample_geo_accession | GSM341657
| Sample_status | Public on Jul 17 2009
| Sample_submission_date | Nov 12 2008
| Sample_last_update_date | Jul 17 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 11 ug total RNA (Expression Analysis Technical Manual, 2004, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, cRNA were hybridized on GeneChip Drosophila Genome Array using manufacturer's standard protocol. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| Sample_scan_protocol | GeneChips were scanned using GeneChip 3000 Scanner 7G.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| Sample_platform_id | GPL1261
| Sample_contact_name | Kevin,K,Lin
| Sample_contact_email | kklin@alumni.uci.edu
| Sample_contact_laboratory | Bogi Andersen
| Sample_contact_department | Biological Chemistry & Medicine
| Sample_contact_institute | University of California, Irvine
| Sample_contact_address | 250 Sprague Hall
| Sample_contact_city | Irvine
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 92697-4030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341657/suppl/GSM341657.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341657/suppl/GSM341657.CHP.gz
| Sample_series_id | GSE13579
| Sample_data_row_count | 45101
| |
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GSM341658 | GPL1261 |
|
Expression profiling of WT littermate dorsal skin_rep3
|
WT dorsal skin at P23, biological replicate 3
|
Age: postnatal day 23
Gender: female
Tissue: dorsal skin
|
Hair cycle staging: telogen
|
Sample_geo_accession | GSM341658
| Sample_status | Public on Jul 17 2009
| Sample_submission_date | Nov 12 2008
| Sample_last_update_date | Jul 17 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 11 ug total RNA (Expression Analysis Technical Manual, 2004, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, cRNA were hybridized on GeneChip Drosophila Genome Array using manufacturer's standard protocol. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| Sample_scan_protocol | GeneChips were scanned using GeneChip 3000 Scanner 7G.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| Sample_platform_id | GPL1261
| Sample_contact_name | Kevin,K,Lin
| Sample_contact_email | kklin@alumni.uci.edu
| Sample_contact_laboratory | Bogi Andersen
| Sample_contact_department | Biological Chemistry & Medicine
| Sample_contact_institute | University of California, Irvine
| Sample_contact_address | 250 Sprague Hall
| Sample_contact_city | Irvine
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 92697-4030
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341658/suppl/GSM341658.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM341nnn/GSM341658/suppl/GSM341658.CHP.gz
| Sample_series_id | GSE13579
| Sample_data_row_count | 45101
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