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Search results for the GEO ID: GSE13635
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GSM343471
GPL1261
Relative gene expression value from wildtype 1 retinas at birth Pool of Wildtype 1 neonates retinas Relative gene expression value from wildtype retinas at birth The dataset was analyzed for statistically significant differential expression using the online NIA Array Analysis Tool REF (http://lgsun.grc.nia.nih.gov/ANOVA/). Probesets were tested for differential expression using the following settings: Threshold z-value to remove outliers: 10000 Error Model: Max(Average, Bayesian) Error variance averaging window: 200 Proportion of highest error variances to be removed: 0.01 Bayesian degrees of freedom: 5 FDR threshold: 0.10 Probesets that did not map to genes for which we had cyclin D1 binding data and probesets that mapped to multiple genes were excluded. In the cases where multiple probesets map to one gene, the probeset with the largest differential expression was retained.
GSM343472
GPL1261
Relative gene expression value from wildtype 2 retinas at birth Pool of Wildtype 2 neonates retinas Relative gene expression value from wildtype retinas at birth The dataset was analyzed for statistically significant differential expression using the online NIA Array Analysis Tool REF (http://lgsun.grc.nia.nih.gov/ANOVA/). Probesets were tested for differential expression using the following settings: Threshold z-value to remove outliers: 10000 Error Model: Max(Average, Bayesian) Error variance averaging window: 200 Proportion of highest error variances to be removed: 0.01 Bayesian degrees of freedom: 5 FDR threshold: 0.10 Probesets that did not map to genes for which we had cyclin D1 binding data and probesets that mapped to multiple genes were excluded. In the cases where multiple probesets map to one gene, the probeset with the largest differential expression was retained.
GSM343473
GPL1261
Relative gene expression value from wildtype 3 retinas at birth Pool of Wildtype 3 neonates retinas Relative gene expression value from wildtype retinas at birth The dataset was analyzed for statistically significant differential expression using the online NIA Array Analysis Tool REF (http://lgsun.grc.nia.nih.gov/ANOVA/). Probesets were tested for differential expression using the following settings: Threshold z-value to remove outliers: 10000 Error Model: Max(Average, Bayesian) Error variance averaging window: 200 Proportion of highest error variances to be removed: 0.01 Bayesian degrees of freedom: 5 FDR threshold: 0.10 Probesets that did not map to genes for which we had cyclin D1 binding data and probesets that mapped to multiple genes were excluded. In the cases where multiple probesets map to one gene, the probeset with the largest differential expression was retained.
GSM343474
GPL1261
Relative gene expression value from Cyclin D1 -/- 1 retinas at birth Pool of Cyclin D1 -/- 1 neonates retinas C57BL/6 129SV Mixed genetic background The dataset was analyzed for statistically significant differential expression using the online NIA Array Analysis Tool REF (http://lgsun.grc.nia.nih.gov/ANOVA/). Probesets were tested for differential expression using the following settings: Threshold z-value to remove outliers: 10000 Error Model: Max(Average, Bayesian) Error variance averaging window: 200 Proportion of highest error variances to be removed: 0.01 Bayesian degrees of freedom: 5 FDR threshold: 0.10 Probesets that did not map to genes for which we had cyclin D1 binding data and probesets that mapped to multiple genes were excluded. In the cases where multiple probesets map to one gene, the probeset with the largest differential expression was retained.
GSM343475
GPL1261
Relative gene expression value from Cyclin D1 -/- 2 retinas at birth Pool of Cyclin D1 -/- 2 neonates retinas C57BL/6 129SV Mixed genetic background The dataset was analyzed for statistically significant differential expression using the online NIA Array Analysis Tool REF (http://lgsun.grc.nia.nih.gov/ANOVA/). Probesets were tested for differential expression using the following settings: Threshold z-value to remove outliers: 10000 Error Model: Max(Average, Bayesian) Error variance averaging window: 200 Proportion of highest error variances to be removed: 0.01 Bayesian degrees of freedom: 5 FDR threshold: 0.10 Probesets that did not map to genes for which we had cyclin D1 binding data and probesets that mapped to multiple genes were excluded. In the cases where multiple probesets map to one gene, the probeset with the largest differential expression was retained.
GSM343476
GPL1261
Relative gene expression value from Cyclin D1 -/- 3 retinas at birth Pool of Cyclin D1 -/- 3 neonates retinas C57BL/6 129SV Mixed genetic background The dataset was analyzed for statistically significant differential expression using the online NIA Array Analysis Tool REF (http://lgsun.grc.nia.nih.gov/ANOVA/). Probesets were tested for differential expression using the following settings: Threshold z-value to remove outliers: 10000 Error Model: Max(Average, Bayesian) Error variance averaging window: 200 Proportion of highest error variances to be removed: 0.01 Bayesian degrees of freedom: 5 FDR threshold: 0.10 Probesets that did not map to genes for which we had cyclin D1 binding data and probesets that mapped to multiple genes were excluded. In the cases where multiple probesets map to one gene, the probeset with the largest differential expression was retained.
 
 
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