Search results for the GEO ID: GSE13946  |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM343263 | GPL1261 |
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conventional 1
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gamma delta intraepithelial lymphocytes, untreated conventional mouse colon
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Strain: C57b/6, conventionally-raised, sorted gammadelta intraepithelial lymphocytes from untreated colon
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comparison of gamma delta intraepithelial lymphocytes from untreated and DSS-treated mouse colons
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| Sample_geo_accession | GSM343263
| | Sample_status | Public on Dec 18 2008
| | Sample_submission_date | Nov 16 2008
| | Sample_last_update_date | Dec 17 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | no treatment
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Arcturus PicoPure RNA isolation kit protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Arcturus HS RiboAmp RNA amplification kit protocol
| | Sample_hyb_protocol | Standard Affymetrix Hybridization Protocol
| | Sample_scan_protocol | Standard Affymetrix Scan Protocol
| | Sample_data_processing | Array was scaled to a target intensity of 500, and the CHP file was generated using Affymetrix GCOS software
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Lora,V,Hooper
| | Sample_contact_email | Lora.Hooper@UTSouthwestern.edu
| | Sample_contact_phone | 214-648-7306
| | Sample_contact_fax | 214-648-7331
| | Sample_contact_department | Center for Immunology
| | Sample_contact_institute | The University of Texas Southwestern Medical Center at Dallas
| | Sample_contact_address | 5323 Harry Hines Blvd.
| | Sample_contact_city | Dallas
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 75390-9093
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM343nnn/GSM343263/suppl/GSM343263.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM343nnn/GSM343263/suppl/GSM343263.CHP.gz
| | Sample_series_id | GSE13946
| | Sample_data_row_count | 45101
| | |
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GSM351029 | GPL1261 |
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conventional 2
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gamma delta intraepithelial lymphocytes, untreated conventional mouse colon
|
strain: C57b/6, conventionally-raised, sorted gammadelta intraepithelial lymphocytes from untreated colon
|
comparison of gamma delta intraepithelial lymphocytes from untreated and DSS-treated mouse colons
|
| Sample_geo_accession | GSM351029
| | Sample_status | Public on Dec 18 2008
| | Sample_submission_date | Dec 13 2008
| | Sample_last_update_date | Dec 17 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | no treatment
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Arcturus PicoPure RNA isolation kit protocol
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Arcturus HS RiboAmp RNA amplification kit protocol
| | Sample_hyb_protocol | Standard Affymetrix Hybridization Protocol
| | Sample_scan_protocol | Standard Affymetrix Scan protocol
| | Sample_data_processing | Array was scaled to a target intensity of 500, and the CHP file was generated using Affymetrix GCOS software
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Lora,V,Hooper
| | Sample_contact_email | Lora.Hooper@UTSouthwestern.edu
| | Sample_contact_phone | 214-648-7306
| | Sample_contact_fax | 214-648-7331
| | Sample_contact_department | Center for Immunology
| | Sample_contact_institute | The University of Texas Southwestern Medical Center at Dallas
| | Sample_contact_address | 5323 Harry Hines Blvd.
| | Sample_contact_city | Dallas
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 75390-9093
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM351nnn/GSM351029/suppl/GSM351029.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM351nnn/GSM351029/suppl/GSM351029.CHP.gz
| | Sample_series_id | GSE13946
| | Sample_data_row_count | 45101
| | |
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GSM351030 | GPL1261 |
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DSS-treated conventional 1
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gamma delta intraepithelial lymphocytes, DSS-treated conventional mouse colon
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Strain: C57b/6, conventionally-raised, sorted gammadelta intraepithelial lymphocytes from DSS-treated colon
|
comparison of gamma delta intraepithelial lymphocytes from untreated and DSS-treated mouse colons
|
| Sample_geo_accession | GSM351030
| | Sample_status | Public on Dec 18 2008
| | Sample_submission_date | Dec 13 2008
| | Sample_last_update_date | Dec 17 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | mice were treated with 2% DSS for 5 days followed by 3 days' recovery on normal drinking water
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Arcturus PicoPure RNA isolation kit protocol
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Arcturus HS RiboAmp RNA amplification kit protocol
| | Sample_hyb_protocol | Standard Affymetrix Hybridization Protocol
| | Sample_scan_protocol | Standard Affymetrix Scan protocol
| | Sample_data_processing | Array was scaled to a target intensity of 500, and the CHP file was generated using Affymetrix GCOS software
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Lora,V,Hooper
| | Sample_contact_email | Lora.Hooper@UTSouthwestern.edu
| | Sample_contact_phone | 214-648-7306
| | Sample_contact_fax | 214-648-7331
| | Sample_contact_department | Center for Immunology
| | Sample_contact_institute | The University of Texas Southwestern Medical Center at Dallas
| | Sample_contact_address | 5323 Harry Hines Blvd.
| | Sample_contact_city | Dallas
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 75390-9093
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM351nnn/GSM351030/suppl/GSM351030.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM351nnn/GSM351030/suppl/GSM351030.CHP.gz
| | Sample_series_id | GSE13946
| | Sample_data_row_count | 45101
| | |
|
GSM351031 | GPL1261 |
|
DSS-treated conventional 2
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gamma delta intraepithelial lymphocytes, DSS-treated conventional mouse colon
|
Strain: C57b/6, conventionally-raised, sorted gammadelta intraepithelial lymphocytes from DSS-treated colon
|
comparison of gamma delta intraepithelial lymphocytes from untreated and DSS-treated mouse colons
|
| Sample_geo_accession | GSM351031
| | Sample_status | Public on Dec 18 2008
| | Sample_submission_date | Dec 13 2008
| | Sample_last_update_date | Dec 17 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | mice were treated with 2% DSS for 5 days followed by 3 days' recovery on normal drinking water
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Arcturus PicoPure RNA isolation kit protocol
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Arcturus HS RiboAmp RNA amplification kit protocol
| | Sample_hyb_protocol | Standard Affymetrix Hybridization Protocol
| | Sample_scan_protocol | Standard Affymetrix Scan protocol
| | Sample_data_processing | Array was scaled to a target intensity of 500, and the CHP file was generated using Affymetrix GCOS software
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Lora,V,Hooper
| | Sample_contact_email | Lora.Hooper@UTSouthwestern.edu
| | Sample_contact_phone | 214-648-7306
| | Sample_contact_fax | 214-648-7331
| | Sample_contact_department | Center for Immunology
| | Sample_contact_institute | The University of Texas Southwestern Medical Center at Dallas
| | Sample_contact_address | 5323 Harry Hines Blvd.
| | Sample_contact_city | Dallas
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 75390-9093
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM351nnn/GSM351031/suppl/GSM351031.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM351nnn/GSM351031/suppl/GSM351031.CHP.gz
| | Sample_series_id | GSE13946
| | Sample_data_row_count | 45101
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