Sample_geo_accession | GSM356975
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Sample_status | Public on Jan 01 2009
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Sample_submission_date | Dec 31 2008
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Sample_last_update_date | Dec 31 2008
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Sample_type | RNA
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Sample_channel_count | 1
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Sample_organism_ch1 | Homo sapiens
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Sample_taxid_ch1 | 9606
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Sample_treatment_protocol_ch1 | Cells were transfected with siRNAs. In the test group, the human endogeous retrovirus HERV-HX was evaluated to be knocked down.
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Sample_growth_protocol_ch1 | Colon cancer HT29 cells were cultured in RPMI 1640 medium supplemented with 10% FCS
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Sample_molecule_ch1 | total RNA
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Sample_extract_protocol_ch1 | Total RNA extracted using Trizol, followed by purification with QIAGEN RNeasy® Kit
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Sample_label_ch1 | biotin
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Sample_label_protocol_ch1 | Use the One-Cycle Target Labeling and Control Reagents (Affymetrix, P/N 900493) following manufacturer's instructions
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Sample_hyb_protocol | Use the GeneChip® Hybridization, Wash and Stain Kit (Affymetrix, P/N 900720) following manufacturer's instructions
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Sample_scan_protocol | Scan on a GeneChip® Scanner 3000
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Sample_data_processing | GCOS (GeneChip® Operating Software) was used.
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Sample_platform_id | GPL570
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Sample_contact_name | Qiaoyi,,Liang
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Sample_contact_email | lqy239@zju.edu.cn
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Sample_contact_phone | 86-571-87784501
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Sample_contact_fax | 86-571-87214404
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Sample_contact_department | Zhejiang University
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Sample_contact_institute | Cancer Insititute
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Sample_contact_address | 88 Jiefang Road
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Sample_contact_city | Hangzhou
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Sample_contact_state | Zhejiang
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Sample_contact_zip/postal_code | 310009
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Sample_contact_country | China
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Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM356nnn/GSM356975/suppl/GSM356975.CEL.gz
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Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM356nnn/GSM356975/suppl/GSM356975.CHP.gz
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Sample_series_id | GSE14257
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Sample_data_row_count | 54675
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