Search results for the GEO ID: GSE14270  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM357094 | GPL1261 |
|
B6_cornea_rep1
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strain: C57Bl/6J
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strain: C57Bl/6J; adult; male
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B6-1
|
| Sample_geo_accession | GSM357094
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Jan 02 2009
| | Sample_last_update_date | Jan 02 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Mice were maintained on a 4% fat NIH 31 diet provided ad libitum, and were housed in cages containing Cellu-dri bedding. The environment was kept at 21°C with a 12-h light:12-h dark cycle
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted, treated with DNase I, and purified (Aurum Total RNA Mini Kit; Bio-Rad Laboratories).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to the standard Affymetrix protocol
| | Sample_hyb_protocol | According to the standard Affymetrix protocol
| | Sample_scan_protocol | According to the standard Affymetrix protocol
| | Sample_data_processing | Data were processed and normalized using ArrayAssist software.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Markus,H,Kuehn
| | Sample_contact_department | Ophthalmology and Visual Sciences
| | Sample_contact_institute | University of Iowa
| | Sample_contact_address | 375 Newton Road
| | Sample_contact_city | Iowa City
| | Sample_contact_state | IA
| | Sample_contact_zip/postal_code | 52242
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357094/suppl/GSM357094.CEL.gz
| | Sample_series_id | GSE14270
| | Sample_data_row_count | 45101
| | |
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GSM357095 | GPL1261 |
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B6_cornea_rep2
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strain: C57Bl/6J
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strain: C57Bl/6J; adult; male
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B6-2
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| Sample_geo_accession | GSM357095
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Jan 02 2009
| | Sample_last_update_date | Jan 02 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Mice were maintained on a 4% fat NIH 31 diet provided ad libitum, and were housed in cages containing Cellu-dri bedding. The environment was kept at 21°C with a 12-h light:12-h dark cycle
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted, treated with DNase I, and purified (Aurum Total RNA Mini Kit; Bio-Rad Laboratories).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to the standard Affymetrix protocol
| | Sample_hyb_protocol | According to the standard Affymetrix protocol
| | Sample_scan_protocol | According to the standard Affymetrix protocol
| | Sample_data_processing | Data were processed and normalized using ArrayAssist software.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Markus,H,Kuehn
| | Sample_contact_department | Ophthalmology and Visual Sciences
| | Sample_contact_institute | University of Iowa
| | Sample_contact_address | 375 Newton Road
| | Sample_contact_city | Iowa City
| | Sample_contact_state | IA
| | Sample_contact_zip/postal_code | 52242
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357095/suppl/GSM357095.CEL.gz
| | Sample_series_id | GSE14270
| | Sample_data_row_count | 45101
| | |
|
GSM357096 | GPL1261 |
|
B6_cornea_rep3
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strain: C57Bl/6J
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strain: C57Bl/6J; adult; male
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B6-5
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| Sample_geo_accession | GSM357096
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Jan 02 2009
| | Sample_last_update_date | Jan 02 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Mice were maintained on a 4% fat NIH 31 diet provided ad libitum, and were housed in cages containing Cellu-dri bedding. The environment was kept at 21°C with a 12-h light:12-h dark cycle
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted, treated with DNase I, and purified (Aurum Total RNA Mini Kit; Bio-Rad Laboratories).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to the standard Affymetrix protocol
| | Sample_hyb_protocol | According to the standard Affymetrix protocol
| | Sample_scan_protocol | According to the standard Affymetrix protocol
| | Sample_data_processing | Data were processed and normalized using ArrayAssist software.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Markus,H,Kuehn
| | Sample_contact_department | Ophthalmology and Visual Sciences
| | Sample_contact_institute | University of Iowa
| | Sample_contact_address | 375 Newton Road
| | Sample_contact_city | Iowa City
| | Sample_contact_state | IA
| | Sample_contact_zip/postal_code | 52242
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357096/suppl/GSM357096.CEL.gz
| | Sample_series_id | GSE14270
| | Sample_data_row_count | 45101
| | |
|
GSM357097 | GPL1261 |
|
KS_cornea_rep1
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strain: C57BLKS/J; thin cornea
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strain: C57BLKS/J; adult; male, thin cornea
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KS-1
|
| Sample_geo_accession | GSM357097
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Jan 02 2009
| | Sample_last_update_date | Jan 02 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Mice were maintained on a 4% fat NIH 31 diet provided ad libitum, and were housed in cages containing Cellu-dri bedding. The environment was kept at 21°C with a 12-h light:12-h dark cycle
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted, treated with DNase I, and purified (Aurum Total RNA Mini Kit; Bio-Rad Laboratories).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to the standard Affymetrix protocol
| | Sample_hyb_protocol | According to the standard Affymetrix protocol
| | Sample_scan_protocol | According to the standard Affymetrix protocol
| | Sample_data_processing | Data were processed and normalized using ArrayAssist software.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Markus,H,Kuehn
| | Sample_contact_department | Ophthalmology and Visual Sciences
| | Sample_contact_institute | University of Iowa
| | Sample_contact_address | 375 Newton Road
| | Sample_contact_city | Iowa City
| | Sample_contact_state | IA
| | Sample_contact_zip/postal_code | 52242
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357097/suppl/GSM357097.CEL.gz
| | Sample_series_id | GSE14270
| | Sample_data_row_count | 45101
| | |
|
GSM357098 | GPL1261 |
|
KS_cornea_rep2
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strain: C57BLKS/J; thin cornea
|
strain: C57BLKS/J; adult; male, thin cornea
|
KS-3
|
| Sample_geo_accession | GSM357098
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Jan 02 2009
| | Sample_last_update_date | Jan 02 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Mice were maintained on a 4% fat NIH 31 diet provided ad libitum, and were housed in cages containing Cellu-dri bedding. The environment was kept at 21°C with a 12-h light:12-h dark cycle
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted, treated with DNase I, and purified (Aurum Total RNA Mini Kit; Bio-Rad Laboratories).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to the standard Affymetrix protocol
| | Sample_hyb_protocol | According to the standard Affymetrix protocol
| | Sample_scan_protocol | According to the standard Affymetrix protocol
| | Sample_data_processing | Data were processed and normalized using ArrayAssist software.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Markus,H,Kuehn
| | Sample_contact_department | Ophthalmology and Visual Sciences
| | Sample_contact_institute | University of Iowa
| | Sample_contact_address | 375 Newton Road
| | Sample_contact_city | Iowa City
| | Sample_contact_state | IA
| | Sample_contact_zip/postal_code | 52242
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357098/suppl/GSM357098.CEL.gz
| | Sample_series_id | GSE14270
| | Sample_data_row_count | 45101
| | |
|
GSM357099 | GPL1261 |
|
KS_cornea_rep3
|
strain: C57BLKS/J; thin cornea
|
strain: C57BLKS/J; adult; male, thin cornea
|
KS-4
|
| Sample_geo_accession | GSM357099
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Jan 02 2009
| | Sample_last_update_date | Jan 02 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Mice were maintained on a 4% fat NIH 31 diet provided ad libitum, and were housed in cages containing Cellu-dri bedding. The environment was kept at 21°C with a 12-h light:12-h dark cycle
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted, treated with DNase I, and purified (Aurum Total RNA Mini Kit; Bio-Rad Laboratories).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to the standard Affymetrix protocol
| | Sample_hyb_protocol | According to the standard Affymetrix protocol
| | Sample_scan_protocol | According to the standard Affymetrix protocol
| | Sample_data_processing | Data were processed and normalized using ArrayAssist software.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Markus,H,Kuehn
| | Sample_contact_department | Ophthalmology and Visual Sciences
| | Sample_contact_institute | University of Iowa
| | Sample_contact_address | 375 Newton Road
| | Sample_contact_city | Iowa City
| | Sample_contact_state | IA
| | Sample_contact_zip/postal_code | 52242
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357099/suppl/GSM357099.CEL.gz
| | Sample_series_id | GSE14270
| | Sample_data_row_count | 45101
| | |
|
GSM357100 | GPL1261 |
|
SJL_cornea_rep1
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strain: SJL/J; thick cornea
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strain: SJL/J; adult; male, thick cornea
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SJL-1
|
| Sample_geo_accession | GSM357100
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Jan 02 2009
| | Sample_last_update_date | Jan 02 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Mice were maintained on a 4% fat NIH 31 diet provided ad libitum, and were housed in cages containing Cellu-dri bedding. The environment was kept at 21°C with a 12-h light:12-h dark cycle
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted, treated with DNase I, and purified (Aurum Total RNA Mini Kit; Bio-Rad Laboratories).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to the standard Affymetrix protocol
| | Sample_hyb_protocol | According to the standard Affymetrix protocol
| | Sample_scan_protocol | According to the standard Affymetrix protocol
| | Sample_data_processing | Data were processed and normalized using ArrayAssist software.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Markus,H,Kuehn
| | Sample_contact_department | Ophthalmology and Visual Sciences
| | Sample_contact_institute | University of Iowa
| | Sample_contact_address | 375 Newton Road
| | Sample_contact_city | Iowa City
| | Sample_contact_state | IA
| | Sample_contact_zip/postal_code | 52242
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357100/suppl/GSM357100.CEL.gz
| | Sample_series_id | GSE14270
| | Sample_data_row_count | 45101
| | |
|
GSM357101 | GPL1261 |
|
SJL_cornea_rep2
|
strain: SJL/J; thick cornea
|
strain: SJL/J; adult; male, thick cornea
|
SJL-2
|
| Sample_geo_accession | GSM357101
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Jan 02 2009
| | Sample_last_update_date | Jan 02 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Mice were maintained on a 4% fat NIH 31 diet provided ad libitum, and were housed in cages containing Cellu-dri bedding. The environment was kept at 21°C with a 12-h light:12-h dark cycle
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted, treated with DNase I, and purified (Aurum Total RNA Mini Kit; Bio-Rad Laboratories).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to the standard Affymetrix protocol
| | Sample_hyb_protocol | According to the standard Affymetrix protocol
| | Sample_scan_protocol | According to the standard Affymetrix protocol
| | Sample_data_processing | Data were processed and normalized using ArrayAssist software.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Markus,H,Kuehn
| | Sample_contact_department | Ophthalmology and Visual Sciences
| | Sample_contact_institute | University of Iowa
| | Sample_contact_address | 375 Newton Road
| | Sample_contact_city | Iowa City
| | Sample_contact_state | IA
| | Sample_contact_zip/postal_code | 52242
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357101/suppl/GSM357101.CEL.gz
| | Sample_series_id | GSE14270
| | Sample_data_row_count | 45101
| | |
|
GSM357102 | GPL1261 |
|
SJL_cornea_rep3
|
strain: SJL/J; thick cornea
|
strain: SJL/J; adult; male, thick cornea
|
SJL-3
|
| Sample_geo_accession | GSM357102
| | Sample_status | Public on Sep 01 2009
| | Sample_submission_date | Jan 02 2009
| | Sample_last_update_date | Jan 02 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | Mice were maintained on a 4% fat NIH 31 diet provided ad libitum, and were housed in cages containing Cellu-dri bedding. The environment was kept at 21°C with a 12-h light:12-h dark cycle
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted, treated with DNase I, and purified (Aurum Total RNA Mini Kit; Bio-Rad Laboratories).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to the standard Affymetrix protocol
| | Sample_hyb_protocol | According to the standard Affymetrix protocol
| | Sample_scan_protocol | According to the standard Affymetrix protocol
| | Sample_data_processing | Data were processed and normalized using ArrayAssist software.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Markus,H,Kuehn
| | Sample_contact_department | Ophthalmology and Visual Sciences
| | Sample_contact_institute | University of Iowa
| | Sample_contact_address | 375 Newton Road
| | Sample_contact_city | Iowa City
| | Sample_contact_state | IA
| | Sample_contact_zip/postal_code | 52242
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357102/suppl/GSM357102.CEL.gz
| | Sample_series_id | GSE14270
| | Sample_data_row_count | 45101
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