Search results for the GEO ID: GSE14308 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM357839 | GPL1261 |
|
Th2-1
|
CD4+ T cells cultured for 10 days
|
CD4+ T cells cultured for 10 days
|
Total cellular RNA from either isolated naïve and natural Treg cells or cells cultured under Th1, Th2, Th17, and iTreg conditions was extracted with TRIzol reagent (Invitrogen) according to the manufacturer's instructions. Approximately 10 µg of RNA was labeled and hybridized to GeneChip Mouse Genome 430 2.0 arrays (Affymetrix) according to the manufacturer's protocols. Expression values were determined using GeneChip Operating Software (GCOS) v1.1.1 software. All data analysis was performed using GeneSpring software GX 7.3.1 (Agilent Technologies).
|
Sample_geo_accession | GSM357839
| Sample_status | Public on Jan 08 2009
| Sample_submission_date | Jan 06 2009
| Sample_last_update_date | Feb 10 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizal reagent, standard protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix
| Sample_hyb_protocol | Standard Affymetrix
| Sample_scan_protocol | Standard Affymetrix
| Sample_data_processing | MAS5 processed
| Sample_platform_id | GPL1261
| Sample_contact_name | Lai,,Wei
| Sample_contact_email | weil2@mail.nih.gov
| Sample_contact_phone | 3014961480
| Sample_contact_institute | NIH/NEI/NCCAM
| Sample_contact_address | 10 Center Dr. Room 2B47
| Sample_contact_city | Bethesda
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20892
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357839/suppl/GSM357839.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357839/suppl/GSM357839.CHP.gz
| Sample_series_id | GSE14308
| Sample_data_row_count | 45101
| |
|
GSM357841 | GPL1261 |
|
Th2-2
|
CD4+ T cells cultured in vitro for 10 days
|
CD4+ T cells cultured in vitro for 10 days
|
Total cellular RNA from either isolated naïve and natural Treg cells or cells cultured under Th1, Th2, Th17, and iTreg conditions was extracted with TRIzol reagent (Invitrogen) according to the manufacturer's instructions. Approximately 10 µg of RNA was labeled and hybridized to GeneChip Mouse Genome 430 2.0 arrays (Affymetrix) according to the manufacturer's protocols. Expression values were determined using GeneChip Operating Software (GCOS) v1.1.1 software. All data analysis was performed using GeneSpring software GX 7.3.1 (Agilent Technologies).
|
Sample_geo_accession | GSM357841
| Sample_status | Public on Jan 08 2009
| Sample_submission_date | Jan 06 2009
| Sample_last_update_date | Feb 06 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizal reagent, standard protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix
| Sample_hyb_protocol | Standard Affymetrix
| Sample_scan_protocol | Standard Affymetrix
| Sample_data_processing | MAS5 processed
| Sample_platform_id | GPL1261
| Sample_contact_name | Lai,,Wei
| Sample_contact_email | weil2@mail.nih.gov
| Sample_contact_phone | 3014961480
| Sample_contact_institute | NIH/NEI/NCCAM
| Sample_contact_address | 10 Center Dr. Room 2B47
| Sample_contact_city | Bethesda
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20892
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357841/suppl/GSM357841.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357841/suppl/GSM357841.CHP.gz
| Sample_series_id | GSE14308
| Sample_data_row_count | 45101
| |
|
GSM357842 | GPL1261 |
|
Th1-2
|
CD4+ T cells cultured in vitro for 10 days
|
CD4+ T cells cultured in vitro for 10 days
|
Total cellular RNA from either isolated naïve and natural Treg cells or cells cultured under Th1, Th2, Th17, and iTreg conditions was extracted with TRIzol reagent (Invitrogen) according to the manufacturer's instructions. Approximately 10 µg of RNA was labeled and hybridized to GeneChip Mouse Genome 430 2.0 arrays (Affymetrix) according to the manufacturer's protocols. Expression values were determined using GeneChip Operating Software (GCOS) v1.1.1 software. All data analysis was performed using GeneSpring software GX 7.3.1 (Agilent Technologies).
|
Sample_geo_accession | GSM357842
| Sample_status | Public on Jan 08 2009
| Sample_submission_date | Jan 06 2009
| Sample_last_update_date | Feb 06 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizal reagent, standard protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix
| Sample_hyb_protocol | Standard Affymetrix
| Sample_scan_protocol | Standard Affymetrix
| Sample_data_processing | MAS5 processed
| Sample_platform_id | GPL1261
| Sample_contact_name | Lai,,Wei
| Sample_contact_email | weil2@mail.nih.gov
| Sample_contact_phone | 3014961480
| Sample_contact_institute | NIH/NEI/NCCAM
| Sample_contact_address | 10 Center Dr. Room 2B47
| Sample_contact_city | Bethesda
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20892
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357842/suppl/GSM357842.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357842/suppl/GSM357842.CHP.gz
| Sample_series_id | GSE14308
| Sample_data_row_count | 45101
| |
|
GSM357843 | GPL1261 |
|
Th17-1
|
CD4+ T cells cultured in vitro for 10 days
|
CD4+ T cells cultured in vitro for 10 days
|
Total cellular RNA from either isolated naïve and natural Treg cells or cells cultured under Th1, Th2, Th17, and iTreg conditions was extracted with TRIzol reagent (Invitrogen) according to the manufacturer's instructions. Approximately 10 µg of RNA was labeled and hybridized to GeneChip Mouse Genome 430 2.0 arrays (Affymetrix) according to the manufacturer's protocols. Expression values were determined using GeneChip Operating Software (GCOS) v1.1.1 software. All data analysis was performed using GeneSpring software GX 7.3.1 (Agilent Technologies).
|
Sample_geo_accession | GSM357843
| Sample_status | Public on Jan 08 2009
| Sample_submission_date | Jan 06 2009
| Sample_last_update_date | Feb 06 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizal reagent, standard protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix
| Sample_hyb_protocol | Standard Affymetrix
| Sample_scan_protocol | Standard Affymetrix
| Sample_data_processing | MAS5 processed
| Sample_platform_id | GPL1261
| Sample_contact_name | Lai,,Wei
| Sample_contact_email | weil2@mail.nih.gov
| Sample_contact_phone | 3014961480
| Sample_contact_institute | NIH/NEI/NCCAM
| Sample_contact_address | 10 Center Dr. Room 2B47
| Sample_contact_city | Bethesda
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20892
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357843/suppl/GSM357843.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357843/suppl/GSM357843.CHP.gz
| Sample_series_id | GSE14308
| Sample_data_row_count | 45101
| |
|
GSM357844 | GPL1261 |
|
Th1-1
|
CD4+ T cells cultured in vitro for 10 days
|
CD4+ T cells cultured in vitro for 10 days
|
Total cellular RNA from either isolated naïve and natural Treg cells or cells cultured under Th1, Th2, Th17, and iTreg conditions was extracted with TRIzol reagent (Invitrogen) according to the manufacturer's instructions. Approximately 10 µg of RNA was labeled and hybridized to GeneChip Mouse Genome 430 2.0 arrays (Affymetrix) according to the manufacturer's protocols. Expression values were determined using GeneChip Operating Software (GCOS) v1.1.1 software. All data analysis was performed using GeneSpring software GX 7.3.1 (Agilent Technologies).
|
Sample_geo_accession | GSM357844
| Sample_status | Public on Jan 08 2009
| Sample_submission_date | Jan 06 2009
| Sample_last_update_date | Feb 06 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizal reagent, standard protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix
| Sample_hyb_protocol | Standard Affymetrix
| Sample_scan_protocol | Standard Affymetrix
| Sample_data_processing | MAS5 processed
| Sample_platform_id | GPL1261
| Sample_contact_name | Lai,,Wei
| Sample_contact_email | weil2@mail.nih.gov
| Sample_contact_phone | 3014961480
| Sample_contact_institute | NIH/NEI/NCCAM
| Sample_contact_address | 10 Center Dr. Room 2B47
| Sample_contact_city | Bethesda
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20892
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357844/suppl/GSM357844.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357844/suppl/GSM357844.CHP.gz
| Sample_series_id | GSE14308
| Sample_data_row_count | 45101
| |
|
GSM357845 | GPL1261 |
|
Th17-2
|
CD4+ T cells cultured in vitro for 10 days
|
CD4+ T cells cultured in vitro for 10 days
|
Total cellular RNA from either isolated naïve and natural Treg cells or cells cultured under Th1, Th2, Th17, and iTreg conditions was extracted with TRIzol reagent (Invitrogen) according to the manufacturer's instructions. Approximately 10 µg of RNA was labeled and hybridized to GeneChip Mouse Genome 430 2.0 arrays (Affymetrix) according to the manufacturer's protocols. Expression values were determined using GeneChip Operating Software (GCOS) v1.1.1 software. All data analysis was performed using GeneSpring software GX 7.3.1 (Agilent Technologies).
|
Sample_geo_accession | GSM357845
| Sample_status | Public on Jan 08 2009
| Sample_submission_date | Jan 06 2009
| Sample_last_update_date | Feb 06 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizal reagent, standard protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix
| Sample_hyb_protocol | Standard Affymetrix
| Sample_scan_protocol | Standard Affymetrix
| Sample_data_processing | MAS5 processed
| Sample_platform_id | GPL1261
| Sample_contact_name | Lai,,Wei
| Sample_contact_email | weil2@mail.nih.gov
| Sample_contact_phone | 3014961480
| Sample_contact_institute | NIH/NEI/NCCAM
| Sample_contact_address | 10 Center Dr. Room 2B47
| Sample_contact_city | Bethesda
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20892
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357845/suppl/GSM357845.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357845/suppl/GSM357845.CHP.gz
| Sample_series_id | GSE14308
| Sample_data_row_count | 45101
| |
|
GSM357847 | GPL1261 |
|
Naive-1
|
Freshly isolated naive CD4+ T cells
|
Freshly isolated naive CD4+ T cells
|
Total cellular RNA from either isolated naïve and natural Treg cells or cells cultured under Th1, Th2, Th17, and iTreg conditions was extracted with TRIzol reagent (Invitrogen) according to the manufacturer's instructions. Approximately 10 µg of RNA was labeled and hybridized to GeneChip Mouse Genome 430 2.0 arrays (Affymetrix) according to the manufacturer's protocols. Expression values were determined using GeneChip Operating Software (GCOS) v1.1.1 software. All data analysis was performed using GeneSpring software GX 7.3.1 (Agilent Technologies).
|
Sample_geo_accession | GSM357847
| Sample_status | Public on Jan 08 2009
| Sample_submission_date | Jan 06 2009
| Sample_last_update_date | Feb 06 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizal reagent, standard protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix
| Sample_hyb_protocol | Standard Affymetrix
| Sample_scan_protocol | Standard Affymetrix
| Sample_data_processing | MAS5 processed
| Sample_platform_id | GPL1261
| Sample_contact_name | Lai,,Wei
| Sample_contact_email | weil2@mail.nih.gov
| Sample_contact_phone | 3014961480
| Sample_contact_institute | NIH/NEI/NCCAM
| Sample_contact_address | 10 Center Dr. Room 2B47
| Sample_contact_city | Bethesda
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20892
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357847/suppl/GSM357847.CEL.gz
| Sample_series_id | GSE14308
| Sample_data_row_count | 45101
| |
|
GSM357848 | GPL1261 |
|
Naive-2
|
Naive CD4+ T cells
|
Naive CD4+ T cells
|
Total cellular RNA from either isolated naïve and natural Treg cells or cells cultured under Th1, Th2, Th17, and iTreg conditions was extracted with TRIzol reagent (Invitrogen) according to the manufacturer's instructions. Approximately 10 µg of RNA was labeled and hybridized to GeneChip Mouse Genome 430 2.0 arrays (Affymetrix) according to the manufacturer's protocols. Expression values were determined using GeneChip Operating Software (GCOS) v1.1.1 software. All data analysis was performed using GeneSpring software GX 7.3.1 (Agilent Technologies).
|
Sample_geo_accession | GSM357848
| Sample_status | Public on Jan 08 2009
| Sample_submission_date | Jan 06 2009
| Sample_last_update_date | Jan 07 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizal reagent, standard protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix
| Sample_hyb_protocol | Standard Affymetrix
| Sample_scan_protocol | Standard Affymetrix
| Sample_data_processing | MAS5 processed
| Sample_platform_id | GPL1261
| Sample_contact_name | Lai,,Wei
| Sample_contact_email | weil2@mail.nih.gov
| Sample_contact_phone | 3014961480
| Sample_contact_institute | NIH/NEI/NCCAM
| Sample_contact_address | 10 Center Dr. Room 2B47
| Sample_contact_city | Bethesda
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20892
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357848/suppl/GSM357848.CEL.gz
| Sample_series_id | GSE14308
| Sample_data_row_count | 45101
| |
|
GSM357849 | GPL1261 |
|
iTreg-1
|
CD4+ T cells cultured in vitro for 10 days
|
CD4+ T cells cultured in vitro for 10 days
|
Total cellular RNA from either isolated naïve and natural Treg cells or cells cultured under Th1, Th2, Th17, and iTreg conditions was extracted with TRIzol reagent (Invitrogen) according to the manufacturer's instructions. Approximately 10 µg of RNA was labeled and hybridized to GeneChip Mouse Genome 430 2.0 arrays (Affymetrix) according to the manufacturer's protocols. Expression values were determined using GeneChip Operating Software (GCOS) v1.1.1 software. All data analysis was performed using GeneSpring software GX 7.3.1 (Agilent Technologies).
|
Sample_geo_accession | GSM357849
| Sample_status | Public on Jan 08 2009
| Sample_submission_date | Jan 06 2009
| Sample_last_update_date | Jan 07 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizal reagent, standard protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix
| Sample_hyb_protocol | Standard Affymetrix
| Sample_scan_protocol | Standard Affymetrix
| Sample_data_processing | MAS5 processed
| Sample_platform_id | GPL1261
| Sample_contact_name | Lai,,Wei
| Sample_contact_email | weil2@mail.nih.gov
| Sample_contact_phone | 3014961480
| Sample_contact_institute | NIH/NEI/NCCAM
| Sample_contact_address | 10 Center Dr. Room 2B47
| Sample_contact_city | Bethesda
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20892
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357849/suppl/GSM357849.CEL.gz
| Sample_series_id | GSE14308
| Sample_data_row_count | 45101
| |
|
GSM357850 | GPL1261 |
|
iTreg-2
|
CD4+ T cells cultured in vitro for 10 days
|
CD4+ T cells cultured in vitro for 10 days
|
Total cellular RNA from either isolated naïve and natural Treg cells or cells cultured under Th1, Th2, Th17, and iTreg conditions was extracted with TRIzol reagent (Invitrogen) according to the manufacturer's instructions. Approximately 10 µg of RNA was labeled and hybridized to GeneChip Mouse Genome 430 2.0 arrays (Affymetrix) according to the manufacturer's protocols. Expression values were determined using GeneChip Operating Software (GCOS) v1.1.1 software. All data analysis was performed using GeneSpring software GX 7.3.1 (Agilent Technologies).
|
Sample_geo_accession | GSM357850
| Sample_status | Public on Jan 08 2009
| Sample_submission_date | Jan 06 2009
| Sample_last_update_date | Jan 07 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizal reagent, standard protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix
| Sample_hyb_protocol | Standard Affymetrix
| Sample_scan_protocol | Standard Affymetrix
| Sample_data_processing | MAS5 processed
| Sample_platform_id | GPL1261
| Sample_contact_name | Lai,,Wei
| Sample_contact_email | weil2@mail.nih.gov
| Sample_contact_phone | 3014961480
| Sample_contact_institute | NIH/NEI/NCCAM
| Sample_contact_address | 10 Center Dr. Room 2B47
| Sample_contact_city | Bethesda
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20892
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357850/suppl/GSM357850.CEL.gz
| Sample_series_id | GSE14308
| Sample_data_row_count | 45101
| |
|
GSM357852 | GPL1261 |
|
nTreg-1
|
CD25hiCD4+ T cells
|
CD25hiCD4+ T cells
|
Total cellular RNA from either isolated naïve and natural Treg cells or cells cultured under Th1, Th2, Th17, and iTreg conditions was extracted with TRIzol reagent (Invitrogen) according to the manufacturer's instructions. Approximately 10 µg of RNA was labeled and hybridized to GeneChip Mouse Genome 430 2.0 arrays (Affymetrix) according to the manufacturer's protocols. Expression values were determined using GeneChip Operating Software (GCOS) v1.1.1 software. All data analysis was performed using GeneSpring software GX 7.3.1 (Agilent Technologies).
|
Sample_geo_accession | GSM357852
| Sample_status | Public on Jan 08 2009
| Sample_submission_date | Jan 06 2009
| Sample_last_update_date | Jan 07 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizal reagent, standard protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix
| Sample_hyb_protocol | Standard Affymetrix
| Sample_scan_protocol | Standard Affymetrix
| Sample_data_processing | MAS5 processed
| Sample_platform_id | GPL1261
| Sample_contact_name | Lai,,Wei
| Sample_contact_email | weil2@mail.nih.gov
| Sample_contact_phone | 3014961480
| Sample_contact_institute | NIH/NEI/NCCAM
| Sample_contact_address | 10 Center Dr. Room 2B47
| Sample_contact_city | Bethesda
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20892
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357852/suppl/GSM357852.CEL.gz
| Sample_series_id | GSE14308
| Sample_data_row_count | 45101
| |
|
GSM357853 | GPL1261 |
|
nTreg-2
|
CD25hiCD4+ T cells
|
CD25hiCD4+ T cells
|
Total cellular RNA from either isolated naïve and natural Treg cells or cells cultured under Th1, Th2, Th17, and iTreg conditions was extracted with TRIzol reagent (Invitrogen) according to the manufacturer's instructions. Approximately 10 µg of RNA was labeled and hybridized to GeneChip Mouse Genome 430 2.0 arrays (Affymetrix) according to the manufacturer's protocols. Expression values were determined using GeneChip Operating Software (GCOS) v1.1.1 software. All data analysis was performed using GeneSpring software GX 7.3.1 (Agilent Technologies).
|
Sample_geo_accession | GSM357853
| Sample_status | Public on Jan 08 2009
| Sample_submission_date | Jan 06 2009
| Sample_last_update_date | Jan 07 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizal reagent, standard protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix
| Sample_hyb_protocol | Standard Affymetrix
| Sample_scan_protocol | Standard Affymetrix
| Sample_data_processing | MAS5 processed
| Sample_platform_id | GPL1261
| Sample_contact_name | Lai,,Wei
| Sample_contact_email | weil2@mail.nih.gov
| Sample_contact_phone | 3014961480
| Sample_contact_institute | NIH/NEI/NCCAM
| Sample_contact_address | 10 Center Dr. Room 2B47
| Sample_contact_city | Bethesda
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 20892
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM357nnn/GSM357853/suppl/GSM357853.CEL.gz
| Sample_series_id | GSE14308
| Sample_data_row_count | 45101
| |
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