Search results for the GEO ID: GSE14479  |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM361605 | GPL570 |
|
CEBPAsilencedAML_#1
|
AML blasts, CEBPA silenced
|
Male, 21 years, CEBPA silenced, FAB M1, Normal cytogenetics
|
2238
|
| Sample_geo_accession | GSM361605
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | May 11 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361605/suppl/GSM361605.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
GSM361606 | GPL570 |
|
CEBPAsilencedAML_#2
|
AML blasts, CEBPA silenced
|
Female, 41 years, CEBPA silenced, FAB M0, Complex karyotype
|
2668
|
| Sample_geo_accession | GSM361606
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | Jan 25 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361606/suppl/GSM361606.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
GSM361607 | GPL570 |
|
CEBPAsilencedAML_#3
|
AML blasts, CEBPA silenced
|
Female, 31 years, FAB M1, Normal cytogenetics
|
2686
|
| Sample_geo_accession | GSM361607
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | Jan 25 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361607/suppl/GSM361607.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
GSM361608 | GPL570 |
|
CEBPAsilencedAML_#4
|
AML blasts, CEBPA silenced
|
Male, 31 years, Complex karyotype, CEBPA silenced
|
3314
|
| Sample_geo_accession | GSM361608
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | Jan 25 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361608/suppl/GSM361608.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
GSM361609 | GPL570 |
|
CEBPAsilencedAML_#5
|
AML blasts, CEBPA silenced
|
Male, 45 years, FAB M1, 46,XY,add(2)(q35)[13]/46,XY[19], CEBPA silenced
|
3483
|
| Sample_geo_accession | GSM361609
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | Jan 25 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361609/suppl/GSM361609.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
GSM361610 | GPL570 |
|
CEBPAsilencedAML_#6
|
AML blasts, CEBPA silenced
|
Male, 72 years, FAB M1, CEBPA silenced, Normal cytogenetics
|
3491
|
| Sample_geo_accession | GSM361610
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | Jan 25 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361610/suppl/GSM361610.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
GSM361611 | GPL570 |
|
CEBPAsilencedAML_#7
|
AML blasts, CEBPA silenced
|
Male, 21 years, FAB M1, CEBPA silenced, 47,XY,+19[22]
|
6947
|
| Sample_geo_accession | GSM361611
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | Jan 25 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361611/suppl/GSM361611.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
GSM361612 | GPL570 |
|
CEBPAsilencedAML_#8
|
AML blasts, CEBPA silenced
|
Female, 40 years, FAB M0, CEBPA silenced, 46,XX,del(6)(q13q23)[16];46,XX[4].nuc ish(MLLx2)[200]
|
7076
|
| Sample_geo_accession | GSM361612
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | Jan 25 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361612/suppl/GSM361612.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
GSM361613 | GPL570 |
|
CEBPAmutantAML_#1
|
AML blasts, CEBPA mutant
|
Male, 19 years, FAB M1, CEBPA mut +, normal cytogenetics
|
1316
|
| Sample_geo_accession | GSM361613
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | Jan 25 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361613/suppl/GSM361613.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
GSM361614 | GPL570 |
|
CEBPAmutantAML_#2
|
AML blasts, CEBPA mutant
|
Male, 45 years, FAB M1, Normal cytogenetics, CEBPA mut +
|
2192
|
| Sample_geo_accession | GSM361614
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | Jan 25 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361614/suppl/GSM361614.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
GSM361615 | GPL570 |
|
CEBPAmutantAML_#3
|
AML blasts, CEBPA mutant
|
Male, 40 years, FAB M1, Normal cytogenetic, CEBPA mut +
|
2218
|
| Sample_geo_accession | GSM361615
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | Jan 25 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361615/suppl/GSM361615.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
GSM361616 | GPL570 |
|
CEBPAmutantAML_#4
|
AML blasts, CEBPA mutant
|
Female, 54 years, FAB M1, Cytogenetics: del9q, CEBPA mut +
|
2242
|
| Sample_geo_accession | GSM361616
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | Jan 25 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361616/suppl/GSM361616.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
GSM361618 | GPL570 |
|
CEBPAmutantAML_#6
|
AML blasts, CEBPA mutant
|
Male, 24 years, FAB M1, Normal cytogenetics, CEBPA mut +
|
2545
|
| Sample_geo_accession | GSM361618
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | Jan 25 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361618/suppl/GSM361618.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
GSM361619 | GPL570 |
|
CEBPAmutantAML_#7
|
AML blasts, CEBPA mutant
|
Male 34 years, FAB M1, Cytogenetics: del9q, CEBPA mut +
|
2753
|
| Sample_geo_accession | GSM361619
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | Jan 25 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361619/suppl/GSM361619.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
GSM361620 | GPL570 |
|
CEBPAmutantAML_#8
|
AML blasts, CEBPA mutant
|
Female, 59 years, FAB M1, Normal cytogenetics, CEBPA mut +
|
3327
|
| Sample_geo_accession | GSM361620
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | Jan 25 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361620/suppl/GSM361620.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
GSM361621 | GPL570 |
|
T-ALL_#1
|
T-ALL blasts
|
Male, 53 years, CD7+, CD2+, cyTdT+, CD45 dim, CD34+, CD13+-, CD133+-, CD22+-.
|
T034
|
| Sample_geo_accession | GSM361621
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | Jan 25 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361621/suppl/GSM361621.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
GSM361622 | GPL570 |
|
T-ALL_#2
|
T-ALL blasts
|
Male, 31 years, CD7+, CD2+, CD5+, cyCD3+, cyTdT+, CD45 dim
|
T057
|
| Sample_geo_accession | GSM361622
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | Jan 25 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361622/suppl/GSM361622.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
GSM361623 | GPL570 |
|
T-ALL_#3
|
T-ALL blasts
|
Male, 35 years, CD7+, CD2+, CD5+, CD1a+, cyCD3+, CD4+, CD8 +-, CD10+, cyTdT+, CD45 dim
|
T059
|
| Sample_geo_accession | GSM361623
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | Jan 25 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361623/suppl/GSM361623.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
GSM361624 | GPL570 |
|
T-ALL_#4
|
T-ALL blasts
|
Male, 29 years, TCRab+ CD7+, CD2+, CD5+-, CD1a+-, cyCD3+, CD3+, CD4+, CD10+-, cyTdT+, CD45 dim
|
T069
|
| Sample_geo_accession | GSM361624
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | Jan 25 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361624/suppl/GSM361624.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
GSM361625 | GPL570 |
|
T-ALL_#5
|
T-ALL blasts
|
Male, 29 years, TCRab+, CD7+, CD2+, CD5+, cyCD3+, CD3+, CD4+, CD8 +-, cyTdT+, CD45 dim
|
T140
|
| Sample_geo_accession | GSM361625
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | Jan 25 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361625/suppl/GSM361625.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
GSM361626 | GPL570 |
|
T-ALL_#6
|
T-ALL blasts
|
Male, 51 years, TCRab+, CD7+, CD2+, CD5+, CD1a+, cyCD3+, CD3+, CD4+, CD8 +-, CD10+ cyTdT+, CD45 dim
|
T145
|
| Sample_geo_accession | GSM361626
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | Jan 25 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361626/suppl/GSM361626.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
GSM361627 | GPL570 |
|
T-ALL_#7
|
T-ALL blasts
|
Male, 39 years, TCRgd+-, TCRab+-, CD7+, CD2+, CD5+, CD1a+, cyCD3+, CD3+ CD4+, CD8 +-, CD10+ cyTdT+, CD45 dim
|
T162
|
| Sample_geo_accession | GSM361627
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | Jan 25 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361627/suppl/GSM361627.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
GSM361628 | GPL570 |
|
T-ALL_#8
|
T-ALL blasts
|
Male, 18 years, CD7+, CD2+, CD5+, CD1a+, cyCD3+, CD4+, CD8 +-, cyTdT+, CD45 dim
|
T163
|
| Sample_geo_accession | GSM361628
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | Jan 25 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361628/suppl/GSM361628.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
GSM361629 | GPL570 |
|
T-ALL_#9
|
T-ALL blasts
|
Male, 23 years, CD7++, CD2+-, CD5+-, CD1a+, cyCD3++, CD4+, CD8 +-, cyTdT+, CD45 dim
|
T174
|
| Sample_geo_accession | GSM361629
| | Sample_status | Public on Jan 21 2009
| | Sample_submission_date | Jan 20 2009
| | Sample_last_update_date | Jan 25 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted by lysis with guanidium isothiocyanate followed by cesium chloride gradient purification.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix protocol
| | Sample_hyb_protocol | Affymetrix protocol
| | Sample_scan_protocol | Affymetrix protocol
| | Sample_data_processing | RMA, log2 transformation
| | Sample_platform_id | GPL570
| | Sample_contact_name | Bas,,Wouters
| | Sample_contact_email | b.wouters@erasmusmc.nl
| | Sample_contact_department | Hematology
| | Sample_contact_institute | Erasmus University Medical Center
| | Sample_contact_address | P.O. Box 2040, room Ee1330B
| | Sample_contact_city | Rotterdam
| | Sample_contact_zip/postal_code | 3000 CA
| | Sample_contact_country | Netherlands
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM361nnn/GSM361629/suppl/GSM361629.CEL.gz
| | Sample_series_id | GSE14479
| | Sample_data_row_count | 54675
| | |
|
| |
| |
Make groups for comparisons |
(2 groups will be compared at a time) |
|
| Select GSMs and click on "Add groups" |
Enter the group name here: |
|
|
|
