Search results for the GEO ID: GSE14666  |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM366013 | GPL1355 |
|
Kidney_2K_SBN1 (female)
|
Strain:SBN/y with 2 indwelling kidneys Gender:Female
|
Strain:SBN/y with 2 indwelling kidneys Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366013
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366013/suppl/GSM366013.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366014 | GPL1355 |
|
Kidney_2K_SBN2 (female)
|
Strain:SBN/y with 2 indwelling kidneys Gender:Female
|
Strain:SBN/y with 2 indwelling kidneys Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366014
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366014/suppl/GSM366014.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366015 | GPL1355 |
|
Kidney_2K_SBN3 (female)
|
Strain:SBN/y with 2 indwelling kidneys Gender:Female
|
Strain:SBN/y with 2 indwelling kidneys Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366015
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366015/suppl/GSM366015.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366016 | GPL1355 |
|
Kidney_2K_SBN4 (female)
|
Strain:SBN/y with 2 indwelling kidneys Gender:Female
|
Strain:SBN/y with 2 indwelling kidneys Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366016
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366016/suppl/GSM366016.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366017 | GPL1355 |
|
Kidney_2K_SBN5 (female)
|
Strain:SBN/y with 2 indwelling kidneys Gender:Female
|
Strain:SBN/y with 2 indwelling kidneys Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366017
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366017/suppl/GSM366017.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366018 | GPL1355 |
|
Kidney_2K_SBN6 (female)
|
Strain:SBN/y with 2 indwelling kidneys Gender:Female
|
Strain:SBN/y with 2 indwelling kidneys Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366018
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366018/suppl/GSM366018.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366019 | GPL1355 |
|
Kidney_2K_SBN7 (female)
|
Strain:SBN/y with 2 indwelling kidneys Gender:Female
|
Strain:SBN/y with 2 indwelling kidneys Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366019
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366019/suppl/GSM366019.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366020 | GPL1355 |
|
Kidney_1K_SBN1 (female)
|
Strain:SBN/y after right uninephrectomy Gender:Female
|
Strain:SBN/y after right uninephrectomy Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366020
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366020/suppl/GSM366020.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366021 | GPL1355 |
|
Kidney_1K_SBN2 (female)
|
Strain:SBN/y after right uninephrectomy Gender:Female
|
Strain:SBN/y after right uninephrectomy Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366021
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366021/suppl/GSM366021.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366022 | GPL1355 |
|
Kidney_1K_SBN3 (female)
|
Strain:SBN/y after right uninephrectomy Gender:Female
|
Strain:SBN/y after right uninephrectomy Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366022
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366022/suppl/GSM366022.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366023 | GPL1355 |
|
Kidney_1K_SBN4 (female)
|
Strain:SBN/y after right uninephrectomy Gender:Female
|
Strain:SBN/y after right uninephrectomy Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366023
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366023/suppl/GSM366023.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366024 | GPL1355 |
|
Kidney_1K_SBN5 (female)
|
Strain:SBN/y after right uninephrectomy Gender:Female
|
Strain:SBN/y after right uninephrectomy Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366024
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366024/suppl/GSM366024.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366025 | GPL1355 |
|
Kidney_1K_SBN6 (female)
|
Strain:SBN/y after right uninephrectomy Gender:Female
|
Strain:SBN/y after right uninephrectomy Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366025
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366025/suppl/GSM366025.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366026 | GPL1355 |
|
Kidney_1K_SBN7 (female)
|
Strain:SBN/y after right uninephrectomy Gender:Female
|
Strain:SBN/y after right uninephrectomy Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366026
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366026/suppl/GSM366026.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366027 | GPL1355 |
|
Kidney_2K_SBH1 (female)
|
Strain:SBH/y with 2 indwelling kidneys Gender:Female
|
Strain:SBH/y with 2 indwelling kidneys Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366027
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366027/suppl/GSM366027.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366028 | GPL1355 |
|
Kidney_2K_SBH2 (female)
|
Strain:SBH/y with 2 indwelling kidneys Gender:Female
|
Strain:SBH/y with 2 indwelling kidneys Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366028
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366028/suppl/GSM366028.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366029 | GPL1355 |
|
Kidney_2K_SBH3 (female)
|
Strain:SBH/y with 2 indwelling kidneys Gender:Female
|
Strain:SBH/y with 2 indwelling kidneys Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366029
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366029/suppl/GSM366029.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366030 | GPL1355 |
|
Kidney_2K_SBH4 (female)
|
Strain:SBH/y with 2 indwelling kidneys Gender:Female
|
Strain:SBH/y with 2 indwelling kidneys Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366030
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366030/suppl/GSM366030.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366031 | GPL1355 |
|
Kidney_2K_SBH5 (female)
|
Strain:SBH/y with 2 indwelling kidneys Gender:Female
|
Strain:SBH/y with 2 indwelling kidneys Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366031
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366031/suppl/GSM366031.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366032 | GPL1355 |
|
Kidney_2K_SBH6 (female)
|
Strain:SBH/y with 2 indwelling kidneys Gender:Female
|
Strain:SBH/y with 2 indwelling kidneys Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366032
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366032/suppl/GSM366032.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366033 | GPL1355 |
|
Kidney_2K_SBH7 (female)
|
Strain:SBH/y with 2 indwelling kidneys Gender:Female
|
Strain:SBH/y with 2 indwelling kidneys Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366033
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366033/suppl/GSM366033.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366034 | GPL1355 |
|
Kidney_1K_SBH1 (female)
|
Strain:SBH/y after right uninephrectomy Gender:Female
|
Strain:SBH/y after right uninephrectomy Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366034
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366034/suppl/GSM366034.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366035 | GPL1355 |
|
Kidney_1K_SBH2 (female)
|
Strain:SBH/y after right uninephrectomy Gender:Female
|
Strain:SBH/y after right uninephrectomy Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366035
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366035/suppl/GSM366035.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366036 | GPL1355 |
|
Kidney_1K_SBH3 (female)
|
Strain:SBH/y after right uninephrectomy Gender:Female
|
Strain:SBH/y after right uninephrectomy Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366036
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366036/suppl/GSM366036.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366037 | GPL1355 |
|
Kidney_1K_SBH4 (female)
|
Strain:SBH/y after right uninephrectomy Gender:Female
|
Strain:SBH/y after right uninephrectomy Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366037
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366037/suppl/GSM366037.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366038 | GPL1355 |
|
Kidney_1K_SBH5 (female)
|
Strain:SBH/y after right uninephrectomy Gender:Female
|
Strain:SBH/y after right uninephrectomy Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366038
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366038/suppl/GSM366038.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366039 | GPL1355 |
|
Kidney_1K_SBH6 (female)
|
Strain:SBH/y after right uninephrectomy Gender:Female
|
Strain:SBH/y after right uninephrectomy Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366039
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366039/suppl/GSM366039.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
GSM366040 | GPL1355 |
|
Kidney_1K_SBH7 (female)
|
Strain:SBH/y after right uninephrectomy Gender:Female
|
Strain:SBH/y after right uninephrectomy Gender:Female Age:5 months Diet:Regular rat chow
|
Expression data from female rat kidney
|
| Sample_geo_accession | GSM366040
| | Sample_status | Public on Jan 31 2009
| | Sample_submission_date | Jan 30 2009
| | Sample_last_update_date | Jan 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_growth_protocol_ch1 | We fed the animals standard rat chow and provided water ad libitum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | We extracted total RNA using the RNeasy mini-kit from QIAGEN (Cat #74104)
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | We used the Genechip Affymetrix labeling kit and the standard protocol recommended by Affymetrix
| | Sample_hyb_protocol | Following fragmentation, we hybridized cRNA overnight at 450C on GeneChip 230 2.0 Array. We washed the GeneChips and stained them in an Affymetrix Fluidics Station.
| | Sample_scan_protocol | We scanned the GeneChips using the GenChip Scanner 3000Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with the GeneChip Operating Software (GCOS); the arrays were normalized by the log scale Robust Multiarray Analysis (RMA)
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Yoram,,Yagil
| | Sample_contact_email | labmomed@bgu.ac.il
| | Sample_contact_phone | 972-8-6745885
| | Sample_contact_fax | 972-8-6745824
| | Sample_contact_laboratory | Laboratory for Molecular Medicine and Israeli Rat Genome Center
| | Sample_contact_institute | Ben-Gurion University, Barzilai Medical Center Campus
| | Sample_contact_address | Hahistadrut
| | Sample_contact_city | Ashkelon
| | Sample_contact_zip/postal_code | 78306
| | Sample_contact_country | Israel
| | Sample_contact_web_link | www.irgc.co.il
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM366nnn/GSM366040/suppl/GSM366040.CEL.gz
| | Sample_series_id | GSE14666
| | Sample_series_id | GSE14677
| | Sample_data_row_count | 31099
| | |
|
| |
| |
Make groups for comparisons |
(2 groups will be compared at a time) |
|
| Select GSMs and click on "Add groups" |
Enter the group name here: |
|
|
|
