Search results for the GEO ID: GSE14854  |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM371739 | GPL339 |
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03-62_BW
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C57BL/6 apoE-/- mice on Western diet
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strain: C57BL/6
condition: extreme hyperlipidemia
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Gene expression data from aorta of 6-week-old female C57BL/6 apoE-/- mice fed Western diet for 2 weeks.
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| Sample_geo_accession | GSM371739
| | Sample_status | Public on Feb 20 2009
| | Sample_submission_date | Feb 17 2009
| | Sample_last_update_date | Feb 17 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | One group of mice was fed a chow diet and the other fed a western diet.
| | Sample_growth_protocol_ch1 | Mice were weaned onto a chow diet at 3 weeks of age and switched onto a Western diet at 4 weeks of age and maintained on the diet for 2 weeks.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 8 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized to mouse arrays MOE430A. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the the Affymetrix Scanner 3000
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating System.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Weibin ,,Shi
| | Sample_contact_email | ws4v@virginia.edu
| | Sample_contact_phone | 434-243-9420
| | Sample_contact_fax | 434-982-5680
| | Sample_contact_laboratory | Shi Lab
| | Sample_contact_department | Radiology
| | Sample_contact_institute | University of Virginia
| | Sample_contact_address | 480 Ray C Hunt Drive
| | Sample_contact_city | Charlottesville
| | Sample_contact_state | VA
| | Sample_contact_zip/postal_code | 22908
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM371nnn/GSM371739/suppl/GSM371739.CEL.gz
| | Sample_series_id | GSE14854
| | Sample_data_row_count | 22690
| | |
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GSM371740 | GPL339 |
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03-62_BC
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C57BL/6 apoE-/- mice on chow diet
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strain: C57BL/6
condition: hyperlipidemia
|
Gene expression data from aorta of 6-week-old female C57BL/6 apoE-/- mice fed chow diet.
|
| Sample_geo_accession | GSM371740
| | Sample_status | Public on Feb 20 2009
| | Sample_submission_date | Feb 17 2009
| | Sample_last_update_date | Feb 17 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | One group of mice was fed a chow diet and the other fed a western diet.
| | Sample_growth_protocol_ch1 | Mice were weaned onto a chow diet at 3 weeks of age and switched onto a Western diet at 4 weeks of age and maintained on the diet for 2 weeks.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 8 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized to mouse arrays MOE430A. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the the Affymetrix Scanner 3000
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating System.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Weibin ,,Shi
| | Sample_contact_email | ws4v@virginia.edu
| | Sample_contact_phone | 434-243-9420
| | Sample_contact_fax | 434-982-5680
| | Sample_contact_laboratory | Shi Lab
| | Sample_contact_department | Radiology
| | Sample_contact_institute | University of Virginia
| | Sample_contact_address | 480 Ray C Hunt Drive
| | Sample_contact_city | Charlottesville
| | Sample_contact_state | VA
| | Sample_contact_zip/postal_code | 22908
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM371nnn/GSM371740/suppl/GSM371740.CEL.gz
| | Sample_series_id | GSE14854
| | Sample_data_row_count | 22690
| | |
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GSM371741 | GPL339 |
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03-62_CW
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C3H apoE-/- mice on Western diet
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strain: C3H/HeJ
condition: extreme hyperlipidemia
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Gene expression data from aorta of 6-week-old female C3H apoE-/- mice fed Western diet for 2 weeks.
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| Sample_geo_accession | GSM371741
| | Sample_status | Public on Feb 20 2009
| | Sample_submission_date | Feb 17 2009
| | Sample_last_update_date | Feb 17 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | One group of mice was fed a chow diet and the other fed a western diet.
| | Sample_growth_protocol_ch1 | Mice were weaned onto a chow diet at 3 weeks of age and switched onto a Western diet at 4 weeks of age and maintained on the diet for 2 weeks.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 8 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized to mouse arrays MOE430A. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the the Affymetrix Scanner 3000
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating System.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Weibin ,,Shi
| | Sample_contact_email | ws4v@virginia.edu
| | Sample_contact_phone | 434-243-9420
| | Sample_contact_fax | 434-982-5680
| | Sample_contact_laboratory | Shi Lab
| | Sample_contact_department | Radiology
| | Sample_contact_institute | University of Virginia
| | Sample_contact_address | 480 Ray C Hunt Drive
| | Sample_contact_city | Charlottesville
| | Sample_contact_state | VA
| | Sample_contact_zip/postal_code | 22908
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM371nnn/GSM371741/suppl/GSM371741.CEL.gz
| | Sample_series_id | GSE14854
| | Sample_data_row_count | 22690
| | |
|
GSM371742 | GPL339 |
|
03-62_CC
|
C3H apoE-/- mice on chow diet
|
strain: C3H/HeJ
condition: hyperlipidemia
|
Gene expression data from aorta of 6-week-old female C3H apoE-/- mice fed chow diet.
|
| Sample_geo_accession | GSM371742
| | Sample_status | Public on Feb 20 2009
| | Sample_submission_date | Feb 17 2009
| | Sample_last_update_date | Feb 17 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | One group of mice was fed a chow diet and the other fed a western diet.
| | Sample_growth_protocol_ch1 | Mice were weaned onto a chow diet at 3 weeks of age and switched onto a Western diet at 4 weeks of age and maintained on the diet for 2 weeks.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 8 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA were hybridized to mouse arrays MOE430A. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the the Affymetrix Scanner 3000
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating System.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Weibin ,,Shi
| | Sample_contact_email | ws4v@virginia.edu
| | Sample_contact_phone | 434-243-9420
| | Sample_contact_fax | 434-982-5680
| | Sample_contact_laboratory | Shi Lab
| | Sample_contact_department | Radiology
| | Sample_contact_institute | University of Virginia
| | Sample_contact_address | 480 Ray C Hunt Drive
| | Sample_contact_city | Charlottesville
| | Sample_contact_state | VA
| | Sample_contact_zip/postal_code | 22908
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM371nnn/GSM371742/suppl/GSM371742.CEL.gz
| | Sample_series_id | GSE14854
| | Sample_data_row_count | 22690
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