Search results for the GEO ID: GSE14891  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM372061 | GPL1261 |
|
Wild-type macrophages 0h
|
wild-type macrophages unstimulated
|
strain: wild-type
|
none
|
| Sample_geo_accession | GSM372061
| | Sample_status | Public on Feb 19 2009
| | Sample_submission_date | Feb 18 2009
| | Sample_last_update_date | Feb 18 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | stimulated with 100 ng/ml LPS for indicated periods
| | Sample_growth_protocol_ch1 | peritoneal macrophages were preprared from thioglycollate-injected mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared by NuGEN Ovation system according to the manufactuerer's inscrution.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Gene CHIP scanner 3000.
| | Sample_data_processing | The data were analyzed with RMA using the arrayassist program (Stratagene).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Osamu ,,Takeuchi
| | Sample_contact_email | otake@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-6879-8303
| | Sample_contact_fax | 81-6-6879-8305
| | Sample_contact_laboratory | Host Defense
| | Sample_contact_department | RIMD
| | Sample_contact_institute | Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-1871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372061/suppl/GSM372061.CEL.gz
| | Sample_series_id | GSE14891
| | Sample_data_row_count | 45101
| | |
|
GSM372062 | GPL1261 |
|
Wild-type macrophages 1h
|
wild-type macrophages stimulated with LPS for 1 h
|
strain: wild-type
|
none
|
| Sample_geo_accession | GSM372062
| | Sample_status | Public on Feb 19 2009
| | Sample_submission_date | Feb 18 2009
| | Sample_last_update_date | Feb 18 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | stimulated with 100 ng/ml LPS for indicated periods
| | Sample_growth_protocol_ch1 | peritoneal macrophages were preprared from thioglycollate-injected mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared by NuGEN Ovation system according to the manufactuerer's inscrution.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Gene CHIP scanner 3000.
| | Sample_data_processing | The data were analyzed with RMA using the arrayassist program (Stratagene).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Osamu ,,Takeuchi
| | Sample_contact_email | otake@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-6879-8303
| | Sample_contact_fax | 81-6-6879-8305
| | Sample_contact_laboratory | Host Defense
| | Sample_contact_department | RIMD
| | Sample_contact_institute | Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-1871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372062/suppl/GSM372062.CEL.gz
| | Sample_series_id | GSE14891
| | Sample_data_row_count | 45101
| | |
|
GSM372063 | GPL1261 |
|
Wild-type macrophages 2h
|
wild-type macrophages stimulated with LPS for 2 h
|
strain: wild-type
|
none
|
| Sample_geo_accession | GSM372063
| | Sample_status | Public on Feb 19 2009
| | Sample_submission_date | Feb 18 2009
| | Sample_last_update_date | Feb 18 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | stimulated with 100 ng/ml LPS for indicated periods
| | Sample_growth_protocol_ch1 | peritoneal macrophages were preprared from thioglycollate-injected mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared by NuGEN Ovation system according to the manufactuerer's inscrution.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Gene CHIP scanner 3000.
| | Sample_data_processing | The data were analyzed with RMA using the arrayassist program (Stratagene).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Osamu ,,Takeuchi
| | Sample_contact_email | otake@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-6879-8303
| | Sample_contact_fax | 81-6-6879-8305
| | Sample_contact_laboratory | Host Defense
| | Sample_contact_department | RIMD
| | Sample_contact_institute | Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-1871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372063/suppl/GSM372063.CEL.gz
| | Sample_series_id | GSE14891
| | Sample_data_row_count | 45101
| | |
|
GSM372064 | GPL1261 |
|
Wild-type macrophages 4h
|
wild-type macrophages stimulated with LPS for 4 h
|
strain: wild-type
|
none
|
| Sample_geo_accession | GSM372064
| | Sample_status | Public on Feb 19 2009
| | Sample_submission_date | Feb 18 2009
| | Sample_last_update_date | Feb 18 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | stimulated with 100 ng/ml LPS for indicated periods
| | Sample_growth_protocol_ch1 | peritoneal macrophages were preprared from thioglycollate-injected mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared by NuGEN Ovation system according to the manufactuerer's inscrution.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Gene CHIP scanner 3000.
| | Sample_data_processing | The data were analyzed with RMA using the arrayassist program (Stratagene).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Osamu ,,Takeuchi
| | Sample_contact_email | otake@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-6879-8303
| | Sample_contact_fax | 81-6-6879-8305
| | Sample_contact_laboratory | Host Defense
| | Sample_contact_department | RIMD
| | Sample_contact_institute | Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-1871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372064/suppl/GSM372064.CEL.gz
| | Sample_series_id | GSE14891
| | Sample_data_row_count | 45101
| | |
|
GSM372065 | GPL1261 |
|
Zc3h12aKO_macrophages_0h
|
Zc3h12a KO macrophages unstimulated
|
strain: Zc3h12a KO
|
none
|
| Sample_geo_accession | GSM372065
| | Sample_status | Public on Feb 19 2009
| | Sample_submission_date | Feb 18 2009
| | Sample_last_update_date | Feb 18 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | stimulated with 100 ng/ml LPS for indicated periods
| | Sample_growth_protocol_ch1 | peritoneal macrophages were preprared from thioglycollate-injected mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared by NuGEN Ovation system according to the manufactuerer's inscrution.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Gene CHIP scanner 3000.
| | Sample_data_processing | The data were analyzed with RMA using the arrayassist program (Stratagene).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Osamu ,,Takeuchi
| | Sample_contact_email | otake@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-6879-8303
| | Sample_contact_fax | 81-6-6879-8305
| | Sample_contact_laboratory | Host Defense
| | Sample_contact_department | RIMD
| | Sample_contact_institute | Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-1871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372065/suppl/GSM372065.CEL.gz
| | Sample_series_id | GSE14891
| | Sample_data_row_count | 45101
| | |
|
GSM372066 | GPL1261 |
|
Zc3h12aKO_macrophages_1h
|
Zc3h12a KO macrophages stimulated with LPS for 1 h
|
strain: Zc3h12a KO
|
none
|
| Sample_geo_accession | GSM372066
| | Sample_status | Public on Feb 19 2009
| | Sample_submission_date | Feb 18 2009
| | Sample_last_update_date | Feb 18 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | stimulated with 100 ng/ml LPS for indicated periods
| | Sample_growth_protocol_ch1 | peritoneal macrophages were preprared from thioglycollate-injected mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared by NuGEN Ovation system according to the manufactuerer's inscrution.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Gene CHIP scanner 3000.
| | Sample_data_processing | The data were analyzed with RMA using the arrayassist program (Stratagene).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Osamu ,,Takeuchi
| | Sample_contact_email | otake@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-6879-8303
| | Sample_contact_fax | 81-6-6879-8305
| | Sample_contact_laboratory | Host Defense
| | Sample_contact_department | RIMD
| | Sample_contact_institute | Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-1871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372066/suppl/GSM372066.CEL.gz
| | Sample_series_id | GSE14891
| | Sample_data_row_count | 45101
| | |
|
GSM372067 | GPL1261 |
|
Zc3h12aKO_macrophages_2h
|
Zc3h12a KO macrophages stimulated with LPS for 2 h
|
strain: Zc3h12a KO
|
none
|
| Sample_geo_accession | GSM372067
| | Sample_status | Public on Feb 19 2009
| | Sample_submission_date | Feb 18 2009
| | Sample_last_update_date | Feb 18 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | stimulated with 100 ng/ml LPS for indicated periods
| | Sample_growth_protocol_ch1 | peritoneal macrophages were preprared from thioglycollate-injected mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared by NuGEN Ovation system according to the manufactuerer's inscrution.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Gene CHIP scanner 3000.
| | Sample_data_processing | The data were analyzed with RMA using the arrayassist program (Stratagene).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Osamu ,,Takeuchi
| | Sample_contact_email | otake@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-6879-8303
| | Sample_contact_fax | 81-6-6879-8305
| | Sample_contact_laboratory | Host Defense
| | Sample_contact_department | RIMD
| | Sample_contact_institute | Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-1871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372067/suppl/GSM372067.CEL.gz
| | Sample_series_id | GSE14891
| | Sample_data_row_count | 45101
| | |
|
GSM372068 | GPL1261 |
|
Zc3h12aKO_macrophages_4h
|
Zc3h12a KO macrophages stimulated with LPS for 4 h
|
strain: Zc3h12a KO
|
none
|
| Sample_geo_accession | GSM372068
| | Sample_status | Public on Feb 19 2009
| | Sample_submission_date | Feb 18 2009
| | Sample_last_update_date | Feb 18 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | stimulated with 100 ng/ml LPS for indicated periods
| | Sample_growth_protocol_ch1 | peritoneal macrophages were preprared from thioglycollate-injected mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared by NuGEN Ovation system according to the manufactuerer's inscrution.
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix GeneChip Mouse Genome 430 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix Gene CHIP scanner 3000.
| | Sample_data_processing | The data were analyzed with RMA using the arrayassist program (Stratagene).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Osamu ,,Takeuchi
| | Sample_contact_email | otake@biken.osaka-u.ac.jp
| | Sample_contact_phone | 81-6-6879-8303
| | Sample_contact_fax | 81-6-6879-8305
| | Sample_contact_laboratory | Host Defense
| | Sample_contact_department | RIMD
| | Sample_contact_institute | Osaka University
| | Sample_contact_address | 3-1 Yamada-oka
| | Sample_contact_city | Suita
| | Sample_contact_state | Osaka
| | Sample_contact_zip/postal_code | 565-1871
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372068/suppl/GSM372068.CEL.gz
| | Sample_series_id | GSE14891
| | Sample_data_row_count | 45101
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