Search results for the GEO ID: GSE14926  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM372800 | GPL570 |
|
N_CD4_1
|
CD4 T cells, Negative Selection
|
age: 30
gender: Male
t_cell_purity: 89%
|
NS1 CD4
|
| Sample_geo_accession | GSM372800
| | Sample_status | Public on May 20 2009
| | Sample_submission_date | Feb 20 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Expression GeneChip Protocol one-cycle procedure. Between 2 and 5micrograms of RNA was used as starting material.
| | Sample_hyb_protocol | Following fragmentation, 15 micrograms of cRNA were hybridised for 16 hours at 45C on Affymetrix U133Plus2 GeneChips. Chips were then washed and stained with SAPE in an Affymetrix GeneChip 450 Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the Ayymetrix GeneChip 3000 scanner
| | Sample_data_processing | Data was normalised using RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rifca,,Le Dieu
| | Sample_contact_email | rledieu@gmail.com
| | Sample_contact_laboratory | Centre for Medical Oncology
| | Sample_contact_department | Institute of Cancer
| | Sample_contact_institute | Queen Mary University of London
| | Sample_contact_address | 3rd Floor, John Vane Science Building, Charterhouse Square
| | Sample_contact_city | London
| | Sample_contact_zip/postal_code | EC1M 6BQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372800/suppl/GSM372800.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE14926
| | Sample_data_row_count | 54675
| | |
|
GSM372801 | GPL570 |
|
N_CD4_2
|
CD4 T cells, Negative Selection
|
age: 44
gender: Female
t_cell_purity: 95.50%
|
NS2 CD4
|
| Sample_geo_accession | GSM372801
| | Sample_status | Public on May 20 2009
| | Sample_submission_date | Feb 20 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Expression GeneChip Protocol one-cycle procedure. Between 2 and 5micrograms of RNA was used as starting material.
| | Sample_hyb_protocol | Following fragmentation, 15 micrograms of cRNA were hybridised for 16 hours at 45C on Affymetrix U133Plus2 GeneChips. Chips were then washed and stained with SAPE in an Affymetrix GeneChip 450 Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the Ayymetrix GeneChip 3000 scanner
| | Sample_data_processing | Data was normalised using RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rifca,,Le Dieu
| | Sample_contact_email | rledieu@gmail.com
| | Sample_contact_laboratory | Centre for Medical Oncology
| | Sample_contact_department | Institute of Cancer
| | Sample_contact_institute | Queen Mary University of London
| | Sample_contact_address | 3rd Floor, John Vane Science Building, Charterhouse Square
| | Sample_contact_city | London
| | Sample_contact_zip/postal_code | EC1M 6BQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372801/suppl/GSM372801.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE14926
| | Sample_data_row_count | 54675
| | |
|
GSM372802 | GPL570 |
|
N_CD4_3
|
CD4 T cells, Negative Selection
|
age: 47
gender: Female
t_cell_purity: 92%
|
NS3 CD4
|
| Sample_geo_accession | GSM372802
| | Sample_status | Public on May 20 2009
| | Sample_submission_date | Feb 20 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Expression GeneChip Protocol one-cycle procedure. Between 2 and 5micrograms of RNA was used as starting material.
| | Sample_hyb_protocol | Following fragmentation, 15 micrograms of cRNA were hybridised for 16 hours at 45C on Affymetrix U133Plus2 GeneChips. Chips were then washed and stained with SAPE in an Affymetrix GeneChip 450 Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the Ayymetrix GeneChip 3000 scanner
| | Sample_data_processing | Data was normalised using RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rifca,,Le Dieu
| | Sample_contact_email | rledieu@gmail.com
| | Sample_contact_laboratory | Centre for Medical Oncology
| | Sample_contact_department | Institute of Cancer
| | Sample_contact_institute | Queen Mary University of London
| | Sample_contact_address | 3rd Floor, John Vane Science Building, Charterhouse Square
| | Sample_contact_city | London
| | Sample_contact_zip/postal_code | EC1M 6BQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372802/suppl/GSM372802.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE14926
| | Sample_data_row_count | 54675
| | |
|
GSM372803 | GPL570 |
|
N_CD4_4
|
CD4 T cells, Negative Selection
|
age: 33
gender: Female
t_cell_purity: 94%
|
NS4 CD4
|
| Sample_geo_accession | GSM372803
| | Sample_status | Public on May 20 2009
| | Sample_submission_date | Feb 20 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Expression GeneChip Protocol one-cycle procedure. Between 2 and 5micrograms of RNA was used as starting material.
| | Sample_hyb_protocol | Following fragmentation, 15 micrograms of cRNA were hybridised for 16 hours at 45C on Affymetrix U133Plus2 GeneChips. Chips were then washed and stained with SAPE in an Affymetrix GeneChip 450 Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the Ayymetrix GeneChip 3000 scanner
| | Sample_data_processing | Data was normalised using RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rifca,,Le Dieu
| | Sample_contact_email | rledieu@gmail.com
| | Sample_contact_laboratory | Centre for Medical Oncology
| | Sample_contact_department | Institute of Cancer
| | Sample_contact_institute | Queen Mary University of London
| | Sample_contact_address | 3rd Floor, John Vane Science Building, Charterhouse Square
| | Sample_contact_city | London
| | Sample_contact_zip/postal_code | EC1M 6BQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372803/suppl/GSM372803.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE14926
| | Sample_data_row_count | 54675
| | |
|
GSM372804 | GPL570 |
|
N_CD4_5
|
CD4 T cells, Negative Selection
|
age: 44
gender: Male
t_cell_purity: 94%
|
NS5 CD4
|
| Sample_geo_accession | GSM372804
| | Sample_status | Public on May 20 2009
| | Sample_submission_date | Feb 20 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Expression GeneChip Protocol one-cycle procedure. Between 2 and 5micrograms of RNA was used as starting material.
| | Sample_hyb_protocol | Following fragmentation, 15 micrograms of cRNA were hybridised for 16 hours at 45C on Affymetrix U133Plus2 GeneChips. Chips were then washed and stained with SAPE in an Affymetrix GeneChip 450 Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the Ayymetrix GeneChip 3000 scanner
| | Sample_data_processing | Data was normalised using RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rifca,,Le Dieu
| | Sample_contact_email | rledieu@gmail.com
| | Sample_contact_laboratory | Centre for Medical Oncology
| | Sample_contact_department | Institute of Cancer
| | Sample_contact_institute | Queen Mary University of London
| | Sample_contact_address | 3rd Floor, John Vane Science Building, Charterhouse Square
| | Sample_contact_city | London
| | Sample_contact_zip/postal_code | EC1M 6BQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372804/suppl/GSM372804.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE14926
| | Sample_data_row_count | 54675
| | |
|
GSM372805 | GPL570 |
|
P_CD4_6
|
CD4 T cells, Positive Selection
|
age: 44
gender: Female
t_cell_purity: 96.30%
|
PS6 CD4
|
| Sample_geo_accession | GSM372805
| | Sample_status | Public on May 20 2009
| | Sample_submission_date | Feb 20 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Expression GeneChip Protocol one-cycle procedure. Between 2 and 5micrograms of RNA was used as starting material.
| | Sample_hyb_protocol | Following fragmentation, 15 micrograms of cRNA were hybridised for 16 hours at 45C on Affymetrix U133Plus2 GeneChips. Chips were then washed and stained with SAPE in an Affymetrix GeneChip 450 Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the Ayymetrix GeneChip 3000 scanner
| | Sample_data_processing | Data was normalised using RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rifca,,Le Dieu
| | Sample_contact_email | rledieu@gmail.com
| | Sample_contact_laboratory | Centre for Medical Oncology
| | Sample_contact_department | Institute of Cancer
| | Sample_contact_institute | Queen Mary University of London
| | Sample_contact_address | 3rd Floor, John Vane Science Building, Charterhouse Square
| | Sample_contact_city | London
| | Sample_contact_zip/postal_code | EC1M 6BQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372805/suppl/GSM372805.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE14926
| | Sample_data_row_count | 54675
| | |
|
GSM372806 | GPL570 |
|
P_CD4_7
|
CD4 T cells, Positive Selection
|
age: 47
gender: Female
t_cell_purity: 97.50%
|
PS7 CD4
|
| Sample_geo_accession | GSM372806
| | Sample_status | Public on May 20 2009
| | Sample_submission_date | Feb 20 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Expression GeneChip Protocol one-cycle procedure. Between 2 and 5micrograms of RNA was used as starting material.
| | Sample_hyb_protocol | Following fragmentation, 15 micrograms of cRNA were hybridised for 16 hours at 45C on Affymetrix U133Plus2 GeneChips. Chips were then washed and stained with SAPE in an Affymetrix GeneChip 450 Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the Ayymetrix GeneChip 3000 scanner
| | Sample_data_processing | Data was normalised using RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rifca,,Le Dieu
| | Sample_contact_email | rledieu@gmail.com
| | Sample_contact_laboratory | Centre for Medical Oncology
| | Sample_contact_department | Institute of Cancer
| | Sample_contact_institute | Queen Mary University of London
| | Sample_contact_address | 3rd Floor, John Vane Science Building, Charterhouse Square
| | Sample_contact_city | London
| | Sample_contact_zip/postal_code | EC1M 6BQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372806/suppl/GSM372806.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE14926
| | Sample_data_row_count | 54675
| | |
|
GSM372807 | GPL570 |
|
P_CD4_8
|
CD4 T cells, Positive Selection
|
age: 33
gender: Female
t_cell_purity: 90%
|
PS8 CD4
|
| Sample_geo_accession | GSM372807
| | Sample_status | Public on May 20 2009
| | Sample_submission_date | Feb 20 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Expression GeneChip Protocol one-cycle procedure. Between 2 and 5micrograms of RNA was used as starting material.
| | Sample_hyb_protocol | Following fragmentation, 15 micrograms of cRNA were hybridised for 16 hours at 45C on Affymetrix U133Plus2 GeneChips. Chips were then washed and stained with SAPE in an Affymetrix GeneChip 450 Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the Ayymetrix GeneChip 3000 scanner
| | Sample_data_processing | Data was normalised using RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rifca,,Le Dieu
| | Sample_contact_email | rledieu@gmail.com
| | Sample_contact_laboratory | Centre for Medical Oncology
| | Sample_contact_department | Institute of Cancer
| | Sample_contact_institute | Queen Mary University of London
| | Sample_contact_address | 3rd Floor, John Vane Science Building, Charterhouse Square
| | Sample_contact_city | London
| | Sample_contact_zip/postal_code | EC1M 6BQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372807/suppl/GSM372807.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE14926
| | Sample_data_row_count | 54675
| | |
|
GSM372808 | GPL570 |
|
P_CD4_10
|
CD4 T cells, Positive Selection
|
age: 27
gender: Female
t_cell_purity: 92%
|
PS10 CD4
|
| Sample_geo_accession | GSM372808
| | Sample_status | Public on May 20 2009
| | Sample_submission_date | Feb 20 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Expression GeneChip Protocol one-cycle procedure. Between 2 and 5micrograms of RNA was used as starting material.
| | Sample_hyb_protocol | Following fragmentation, 15 micrograms of cRNA were hybridised for 16 hours at 45C on Affymetrix U133Plus2 GeneChips. Chips were then washed and stained with SAPE in an Affymetrix GeneChip 450 Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the Ayymetrix GeneChip 3000 scanner
| | Sample_data_processing | Data was normalised using RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rifca,,Le Dieu
| | Sample_contact_email | rledieu@gmail.com
| | Sample_contact_laboratory | Centre for Medical Oncology
| | Sample_contact_department | Institute of Cancer
| | Sample_contact_institute | Queen Mary University of London
| | Sample_contact_address | 3rd Floor, John Vane Science Building, Charterhouse Square
| | Sample_contact_city | London
| | Sample_contact_zip/postal_code | EC1M 6BQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372808/suppl/GSM372808.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE14926
| | Sample_data_row_count | 54675
| | |
|
GSM372809 | GPL570 |
|
N_CD8_1
|
CD8 T cells, Negative Selection
|
age: 35
gender: Male
t_cell_purity: 91%
|
NS1 CD8
|
| Sample_geo_accession | GSM372809
| | Sample_status | Public on May 20 2009
| | Sample_submission_date | Feb 20 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Expression GeneChip Protocol one-cycle procedure. Between 2 and 5micrograms of RNA was used as starting material.
| | Sample_hyb_protocol | Following fragmentation, 15 micrograms of cRNA were hybridised for 16 hours at 45C on Affymetrix U133Plus2 GeneChips. Chips were then washed and stained with SAPE in an Affymetrix GeneChip 450 Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the Ayymetrix GeneChip 3000 scanner
| | Sample_data_processing | Data was normalised using RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rifca,,Le Dieu
| | Sample_contact_email | rledieu@gmail.com
| | Sample_contact_laboratory | Centre for Medical Oncology
| | Sample_contact_department | Institute of Cancer
| | Sample_contact_institute | Queen Mary University of London
| | Sample_contact_address | 3rd Floor, John Vane Science Building, Charterhouse Square
| | Sample_contact_city | London
| | Sample_contact_zip/postal_code | EC1M 6BQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372809/suppl/GSM372809.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE14926
| | Sample_data_row_count | 54675
| | |
|
GSM372810 | GPL570 |
|
N_CD8_2
|
CD8 T cells, Negative Selection
|
age: 33
gender: Male
t_cell_purity: 88%
|
NS2 CD8
|
| Sample_geo_accession | GSM372810
| | Sample_status | Public on May 20 2009
| | Sample_submission_date | Feb 20 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Expression GeneChip Protocol one-cycle procedure. Between 2 and 5micrograms of RNA was used as starting material.
| | Sample_hyb_protocol | Following fragmentation, 15 micrograms of cRNA were hybridised for 16 hours at 45C on Affymetrix U133Plus2 GeneChips. Chips were then washed and stained with SAPE in an Affymetrix GeneChip 450 Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the Ayymetrix GeneChip 3000 scanner
| | Sample_data_processing | Data was normalised using RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rifca,,Le Dieu
| | Sample_contact_email | rledieu@gmail.com
| | Sample_contact_laboratory | Centre for Medical Oncology
| | Sample_contact_department | Institute of Cancer
| | Sample_contact_institute | Queen Mary University of London
| | Sample_contact_address | 3rd Floor, John Vane Science Building, Charterhouse Square
| | Sample_contact_city | London
| | Sample_contact_zip/postal_code | EC1M 6BQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372810/suppl/GSM372810.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE14926
| | Sample_data_row_count | 54675
| | |
|
GSM372811 | GPL570 |
|
N_CD8_3
|
CD8 T cells, Negative Selection
|
age: 37
gender: Male
t_cell_purity: 83%
|
NS3 CD8
|
| Sample_geo_accession | GSM372811
| | Sample_status | Public on May 20 2009
| | Sample_submission_date | Feb 20 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Expression GeneChip Protocol one-cycle procedure. Between 2 and 5micrograms of RNA was used as starting material.
| | Sample_hyb_protocol | Following fragmentation, 15 micrograms of cRNA were hybridised for 16 hours at 45C on Affymetrix U133Plus2 GeneChips. Chips were then washed and stained with SAPE in an Affymetrix GeneChip 450 Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the Ayymetrix GeneChip 3000 scanner
| | Sample_data_processing | Data was normalised using RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rifca,,Le Dieu
| | Sample_contact_email | rledieu@gmail.com
| | Sample_contact_laboratory | Centre for Medical Oncology
| | Sample_contact_department | Institute of Cancer
| | Sample_contact_institute | Queen Mary University of London
| | Sample_contact_address | 3rd Floor, John Vane Science Building, Charterhouse Square
| | Sample_contact_city | London
| | Sample_contact_zip/postal_code | EC1M 6BQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372811/suppl/GSM372811.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE14926
| | Sample_data_row_count | 54675
| | |
|
GSM372812 | GPL570 |
|
N_CD8_4
|
CD8 T cells, Negative Selection
|
age: 33
gender: Female
t_cell_purity: 87%
|
NS4 CD8
|
| Sample_geo_accession | GSM372812
| | Sample_status | Public on May 20 2009
| | Sample_submission_date | Feb 20 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Expression GeneChip Protocol one-cycle procedure. Between 2 and 5micrograms of RNA was used as starting material.
| | Sample_hyb_protocol | Following fragmentation, 15 micrograms of cRNA were hybridised for 16 hours at 45C on Affymetrix U133Plus2 GeneChips. Chips were then washed and stained with SAPE in an Affymetrix GeneChip 450 Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the Ayymetrix GeneChip 3000 scanner
| | Sample_data_processing | Data was normalised using RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rifca,,Le Dieu
| | Sample_contact_email | rledieu@gmail.com
| | Sample_contact_laboratory | Centre for Medical Oncology
| | Sample_contact_department | Institute of Cancer
| | Sample_contact_institute | Queen Mary University of London
| | Sample_contact_address | 3rd Floor, John Vane Science Building, Charterhouse Square
| | Sample_contact_city | London
| | Sample_contact_zip/postal_code | EC1M 6BQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372812/suppl/GSM372812.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE14926
| | Sample_data_row_count | 54675
| | |
|
GSM372813 | GPL570 |
|
N_CD8_5
|
CD8 T cells, Negative Selection
|
age: 44
gender: Male
t_cell_purity: 76%
|
NS5 CD8
|
| Sample_geo_accession | GSM372813
| | Sample_status | Public on May 20 2009
| | Sample_submission_date | Feb 20 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Expression GeneChip Protocol one-cycle procedure. Between 2 and 5micrograms of RNA was used as starting material.
| | Sample_hyb_protocol | Following fragmentation, 15 micrograms of cRNA were hybridised for 16 hours at 45C on Affymetrix U133Plus2 GeneChips. Chips were then washed and stained with SAPE in an Affymetrix GeneChip 450 Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the Ayymetrix GeneChip 3000 scanner
| | Sample_data_processing | Data was normalised using RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rifca,,Le Dieu
| | Sample_contact_email | rledieu@gmail.com
| | Sample_contact_laboratory | Centre for Medical Oncology
| | Sample_contact_department | Institute of Cancer
| | Sample_contact_institute | Queen Mary University of London
| | Sample_contact_address | 3rd Floor, John Vane Science Building, Charterhouse Square
| | Sample_contact_city | London
| | Sample_contact_zip/postal_code | EC1M 6BQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372813/suppl/GSM372813.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE14926
| | Sample_data_row_count | 54675
| | |
|
GSM372814 | GPL570 |
|
P_CD8_7
|
CD8 T cells, Positive Selection
|
age: 37
gender: Male
t_cell_purity: 94.10%
|
PS7 CD8
|
| Sample_geo_accession | GSM372814
| | Sample_status | Public on May 20 2009
| | Sample_submission_date | Feb 20 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Expression GeneChip Protocol one-cycle procedure. Between 2 and 5micrograms of RNA was used as starting material.
| | Sample_hyb_protocol | Following fragmentation, 15 micrograms of cRNA were hybridised for 16 hours at 45C on Affymetrix U133Plus2 GeneChips. Chips were then washed and stained with SAPE in an Affymetrix GeneChip 450 Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the Ayymetrix GeneChip 3000 scanner
| | Sample_data_processing | Data was normalised using RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rifca,,Le Dieu
| | Sample_contact_email | rledieu@gmail.com
| | Sample_contact_laboratory | Centre for Medical Oncology
| | Sample_contact_department | Institute of Cancer
| | Sample_contact_institute | Queen Mary University of London
| | Sample_contact_address | 3rd Floor, John Vane Science Building, Charterhouse Square
| | Sample_contact_city | London
| | Sample_contact_zip/postal_code | EC1M 6BQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372814/suppl/GSM372814.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE14926
| | Sample_data_row_count | 54675
| | |
|
GSM372815 | GPL570 |
|
P_CD8_8
|
CD8 T cells, Positive Selection
|
age: 44
gender: Male
t_cell_purity: 89.50%
|
PS8 CD8
|
| Sample_geo_accession | GSM372815
| | Sample_status | Public on May 20 2009
| | Sample_submission_date | Feb 20 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Expression GeneChip Protocol one-cycle procedure. Between 2 and 5micrograms of RNA was used as starting material.
| | Sample_hyb_protocol | Following fragmentation, 15 micrograms of cRNA were hybridised for 16 hours at 45C on Affymetrix U133Plus2 GeneChips. Chips were then washed and stained with SAPE in an Affymetrix GeneChip 450 Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the Ayymetrix GeneChip 3000 scanner
| | Sample_data_processing | Data was normalised using RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rifca,,Le Dieu
| | Sample_contact_email | rledieu@gmail.com
| | Sample_contact_laboratory | Centre for Medical Oncology
| | Sample_contact_department | Institute of Cancer
| | Sample_contact_institute | Queen Mary University of London
| | Sample_contact_address | 3rd Floor, John Vane Science Building, Charterhouse Square
| | Sample_contact_city | London
| | Sample_contact_zip/postal_code | EC1M 6BQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372815/suppl/GSM372815.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE14926
| | Sample_data_row_count | 54675
| | |
|
GSM372816 | GPL570 |
|
P_CD8_9
|
CD8 T cells, Positive Selection
|
age: 33
gender: Female
t_cell_purity: 93.30%
|
PS9 CD8
|
| Sample_geo_accession | GSM372816
| | Sample_status | Public on May 20 2009
| | Sample_submission_date | Feb 20 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Expression GeneChip Protocol one-cycle procedure. Between 2 and 5micrograms of RNA was used as starting material.
| | Sample_hyb_protocol | Following fragmentation, 15 micrograms of cRNA were hybridised for 16 hours at 45C on Affymetrix U133Plus2 GeneChips. Chips were then washed and stained with SAPE in an Affymetrix GeneChip 450 Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the Ayymetrix GeneChip 3000 scanner
| | Sample_data_processing | Data was normalised using RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rifca,,Le Dieu
| | Sample_contact_email | rledieu@gmail.com
| | Sample_contact_laboratory | Centre for Medical Oncology
| | Sample_contact_department | Institute of Cancer
| | Sample_contact_institute | Queen Mary University of London
| | Sample_contact_address | 3rd Floor, John Vane Science Building, Charterhouse Square
| | Sample_contact_city | London
| | Sample_contact_zip/postal_code | EC1M 6BQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372816/suppl/GSM372816.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE14926
| | Sample_data_row_count | 54675
| | |
|
GSM372817 | GPL570 |
|
P_CD8_10
|
CD8 T cells, Positive Selection
|
age: 31
gender: Male
t_cell_purity: 89%
|
PS10 CD8
|
| Sample_geo_accession | GSM372817
| | Sample_status | Public on May 20 2009
| | Sample_submission_date | Feb 20 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Expression GeneChip Protocol one-cycle procedure. Between 2 and 5micrograms of RNA was used as starting material.
| | Sample_hyb_protocol | Following fragmentation, 15 micrograms of cRNA were hybridised for 16 hours at 45C on Affymetrix U133Plus2 GeneChips. Chips were then washed and stained with SAPE in an Affymetrix GeneChip 450 Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the Ayymetrix GeneChip 3000 scanner
| | Sample_data_processing | Data was normalised using RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rifca,,Le Dieu
| | Sample_contact_email | rledieu@gmail.com
| | Sample_contact_laboratory | Centre for Medical Oncology
| | Sample_contact_department | Institute of Cancer
| | Sample_contact_institute | Queen Mary University of London
| | Sample_contact_address | 3rd Floor, John Vane Science Building, Charterhouse Square
| | Sample_contact_city | London
| | Sample_contact_zip/postal_code | EC1M 6BQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372817/suppl/GSM372817.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE14926
| | Sample_data_row_count | 54675
| | |
|
GSM372818 | GPL570 |
|
P_CD8_11
|
CD8 T cells, Positive Selection
|
age: 31
gender: Male
t_cell_purity: 87%
|
PS11 CD8
|
| Sample_geo_accession | GSM372818
| | Sample_status | Public on May 20 2009
| | Sample_submission_date | Feb 20 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using Trizol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Expression GeneChip Protocol one-cycle procedure. Between 2 and 5micrograms of RNA was used as starting material.
| | Sample_hyb_protocol | Following fragmentation, 15 micrograms of cRNA were hybridised for 16 hours at 45C on Affymetrix U133Plus2 GeneChips. Chips were then washed and stained with SAPE in an Affymetrix GeneChip 450 Fluidics Station.
| | Sample_scan_protocol | GeneChips were scanned using the Ayymetrix GeneChip 3000 scanner
| | Sample_data_processing | Data was normalised using RMA
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rifca,,Le Dieu
| | Sample_contact_email | rledieu@gmail.com
| | Sample_contact_laboratory | Centre for Medical Oncology
| | Sample_contact_department | Institute of Cancer
| | Sample_contact_institute | Queen Mary University of London
| | Sample_contact_address | 3rd Floor, John Vane Science Building, Charterhouse Square
| | Sample_contact_city | London
| | Sample_contact_zip/postal_code | EC1M 6BQ
| | Sample_contact_country | United Kingdom
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM372nnn/GSM372818/suppl/GSM372818.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE14926
| | Sample_data_row_count | 54675
| | |
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