Search results for the GEO ID: GSE14980  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM374035 | GPL1261 |
|
G1ME_Vector_Control_18hour_repA
|
G1ME cell line transduced with MIGR1 vector control
|
cell line: G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line
|
G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line, transduced with MIGR1-GFP control vector. GFP-positive cells isolated by FACS 18 hours following transduction.
|
| Sample_geo_accession | GSM374035
| | Sample_status | Public on Jun 10 2009
| | Sample_submission_date | Feb 24 2009
| | Sample_last_update_date | Jun 10 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells transduced with MIGR1-GFP control vector. GFP-positive cells isolated by FACS 18 hours following transduction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Trizol and the Qiagen RNeasy kit.
| | Sample_label_ch1 | Phycoerythrin
| | Sample_label_protocol_ch1 | Manufacturer's (Affymetrix) protocol
| | Sample_hyb_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_scan_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_data_processing | Expression data was extracted from the resulting CEL files using GenePattern's implementation of the GCRMA algorithm with quantile normalization, and MAS5 algorithm for present/absent calls.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Charles,,Bailey
| | Sample_contact_email | baileych@mail.med.upenn.edu
| | Sample_contact_department | Pediatrics
| | Sample_contact_institute | Children's Hospital of Philadelphia
| | Sample_contact_address | Oncology/4 Wood, 1 Children's Center
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM374nnn/GSM374035/suppl/GSM374035.CEL.gz
| | Sample_series_id | GSE14980
| | Sample_data_row_count | 45101
| | |
|
GSM374038 | GPL1261 |
|
G1ME_Vector_Control_18hour_repB
|
G1ME cell line transduced with MIGR1 vector control
|
cell line: G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line
|
G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line, transduced with MIGR1-GFP control vector. GFP-positive cells isolated by FACS 18 hours following transduction. Replicate B.
|
| Sample_geo_accession | GSM374038
| | Sample_status | Public on Jun 10 2009
| | Sample_submission_date | Feb 24 2009
| | Sample_last_update_date | Jun 10 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells transduced with MIGR1-GFP control vector. GFP-positive cells isolated by FACS 18 hours following transduction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Trizol and the Qiagen RNeasy kit.
| | Sample_label_ch1 | Phycoerythrin
| | Sample_label_protocol_ch1 | Manufacturer's (Affymetrix) protocol
| | Sample_hyb_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_scan_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_data_processing | Expression data was extracted from the resulting CEL files using GenePattern's implementation of the GCRMA algorithm with quantile normalization, and MAS5 algorithm for present/absent calls.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Charles,,Bailey
| | Sample_contact_email | baileych@mail.med.upenn.edu
| | Sample_contact_department | Pediatrics
| | Sample_contact_institute | Children's Hospital of Philadelphia
| | Sample_contact_address | Oncology/4 Wood, 1 Children's Center
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM374nnn/GSM374038/suppl/GSM374038.CEL.gz
| | Sample_series_id | GSE14980
| | Sample_data_row_count | 45101
| | |
|
GSM374039 | GPL1261 |
|
G1ME_Vector_Control_18hour_repC
|
G1ME cell line transduced with MIGR1 vector control
|
cell line: G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line
|
G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line, transduced with MIGR1-GFP control vector. GFP-positive cells isolated by FACS 18 hours following transduction. Replicate C.
|
| Sample_geo_accession | GSM374039
| | Sample_status | Public on Jun 10 2009
| | Sample_submission_date | Feb 24 2009
| | Sample_last_update_date | Jun 10 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells transduced with MIGR1-GFP control vector. GFP-positive cells isolated by FACS 18 hours following transduction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Trizol and the Qiagen RNeasy kit.
| | Sample_label_ch1 | Phycoerythrin
| | Sample_label_protocol_ch1 | Manufacturer's (Affymetrix) protocol
| | Sample_hyb_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_scan_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_data_processing | Expression data was extracted from the resulting CEL files using GenePattern's implementation of the GCRMA algorithm with quantile normalization, and MAS5 algorithm for present/absent calls.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Charles,,Bailey
| | Sample_contact_email | baileych@mail.med.upenn.edu
| | Sample_contact_department | Pediatrics
| | Sample_contact_institute | Children's Hospital of Philadelphia
| | Sample_contact_address | Oncology/4 Wood, 1 Children's Center
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM374nnn/GSM374039/suppl/GSM374039.CEL.gz
| | Sample_series_id | GSE14980
| | Sample_data_row_count | 45101
| | |
|
GSM374040 | GPL1261 |
|
G1ME_GATA1_18hour_repA
|
G1ME cell line transduced with GATA1-expressing construct
|
cell line: G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line
|
G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line, transduced with MIGR1-GFP vector expressing GATA1. GFP-positive cells isolated by FACS 18 hours following transduction. Replicate A.
|
| Sample_geo_accession | GSM374040
| | Sample_status | Public on Jun 10 2009
| | Sample_submission_date | Feb 24 2009
| | Sample_last_update_date | Jun 10 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells transduced with MIGR1-GFP vector expressing GATA1. GFP-positive cells isolated by FACS 18 hours following transduction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Trizol and the Qiagen RNeasy kit.
| | Sample_label_ch1 | Phycoerythrin
| | Sample_label_protocol_ch1 | Manufacturer's (Affymetrix) protocol
| | Sample_hyb_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_scan_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_data_processing | Expression data was extracted from the resulting CEL files using GenePattern's implementation of the GCRMA algorithm with quantile normalization, and MAS5 algorithm for present/absent calls.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Charles,,Bailey
| | Sample_contact_email | baileych@mail.med.upenn.edu
| | Sample_contact_department | Pediatrics
| | Sample_contact_institute | Children's Hospital of Philadelphia
| | Sample_contact_address | Oncology/4 Wood, 1 Children's Center
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM374nnn/GSM374040/suppl/GSM374040.CEL.gz
| | Sample_series_id | GSE14980
| | Sample_data_row_count | 45101
| | |
|
GSM374041 | GPL1261 |
|
G1ME_GATA1_18hour_repB
|
G1ME cell line transduced with GATA1-expressing construct
|
cell line: G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line
|
G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line, transduced with MIGR1-GFP vector expressing GATA1. GFP-positive cells isolated by FACS 18 hours following transduction. Replicate B.
|
| Sample_geo_accession | GSM374041
| | Sample_status | Public on Jun 10 2009
| | Sample_submission_date | Feb 24 2009
| | Sample_last_update_date | Jun 10 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells transduced with MIGR1-GFP vector expressing GATA1. GFP-positive cells isolated by FACS 18 hours following transduction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Trizol and the Qiagen RNeasy kit.
| | Sample_label_ch1 | Phycoerythrin
| | Sample_label_protocol_ch1 | Manufacturer's (Affymetrix) protocol
| | Sample_hyb_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_scan_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_data_processing | Expression data was extracted from the resulting CEL files using GenePattern's implementation of the GCRMA algorithm with quantile normalization, and MAS5 algorithm for present/absent calls.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Charles,,Bailey
| | Sample_contact_email | baileych@mail.med.upenn.edu
| | Sample_contact_department | Pediatrics
| | Sample_contact_institute | Children's Hospital of Philadelphia
| | Sample_contact_address | Oncology/4 Wood, 1 Children's Center
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM374nnn/GSM374041/suppl/GSM374041.CEL.gz
| | Sample_series_id | GSE14980
| | Sample_data_row_count | 45101
| | |
|
GSM374043 | GPL1261 |
|
G1ME_GATA1_18hour_repC
|
G1ME cell line transduced with GATA1-expressing construct
|
cell line: G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line
|
G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line, transduced with MIGR1-GFP vector expressing GATA1. GFP-positive cells isolated by FACS 18 hours following transduction. Replicate C.
|
| Sample_geo_accession | GSM374043
| | Sample_status | Public on Jun 10 2009
| | Sample_submission_date | Feb 24 2009
| | Sample_last_update_date | Jun 10 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells transduced with MIGR1-GFP vector expressing GATA1. GFP-positive cells isolated by FACS 18 hours following transduction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Trizol and the Qiagen RNeasy kit.
| | Sample_label_ch1 | Phycoerythrin
| | Sample_label_protocol_ch1 | Manufacturer's (Affymetrix) protocol
| | Sample_hyb_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_scan_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_data_processing | Expression data was extracted from the resulting CEL files using GenePattern's implementation of the GCRMA algorithm with quantile normalization, and MAS5 algorithm for present/absent calls.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Charles,,Bailey
| | Sample_contact_email | baileych@mail.med.upenn.edu
| | Sample_contact_department | Pediatrics
| | Sample_contact_institute | Children's Hospital of Philadelphia
| | Sample_contact_address | Oncology/4 Wood, 1 Children's Center
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM374nnn/GSM374043/suppl/GSM374043.CEL.gz
| | Sample_series_id | GSE14980
| | Sample_data_row_count | 45101
| | |
|
GSM374045 | GPL1261 |
|
G1ME_Vector_Control_42hour_repA
|
G1ME cell line transduced with MIGR1 vector control
|
cell line: G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line
|
G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line, transduced with MIGR1-GFP control vector. GFP-positive cells isolated by FACS 42 hours following transduction. Replicate A.
|
| Sample_geo_accession | GSM374045
| | Sample_status | Public on Jun 10 2009
| | Sample_submission_date | Feb 24 2009
| | Sample_last_update_date | Jun 10 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells transduced with MIGR1-GFP control vector. GFP-positive cells isolated by FACS 42 hours following transduction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Trizol and the Qiagen RNeasy kit.
| | Sample_label_ch1 | Phycoerythrin
| | Sample_label_protocol_ch1 | Manufacturer's (Affymetrix) protocol
| | Sample_hyb_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_scan_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_data_processing | Expression data was extracted from the resulting CEL files using GenePattern's implementation of the GCRMA algorithm with quantile normalization, and MAS5 algorithm for present/absent calls.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Charles,,Bailey
| | Sample_contact_email | baileych@mail.med.upenn.edu
| | Sample_contact_department | Pediatrics
| | Sample_contact_institute | Children's Hospital of Philadelphia
| | Sample_contact_address | Oncology/4 Wood, 1 Children's Center
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM374nnn/GSM374045/suppl/GSM374045.CEL.gz
| | Sample_series_id | GSE14980
| | Sample_data_row_count | 45101
| | |
|
GSM374047 | GPL1261 |
|
G1ME_Vector_Control_42hour_repB
|
G1ME cell line transduced with MIGR1 vector control
|
cell line: G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line
|
G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line, transduced with MIGR1-GFP control vector. GFP-positive cells isolated by FACS 42 hours following transduction. Replicate B.
|
| Sample_geo_accession | GSM374047
| | Sample_status | Public on Jun 10 2009
| | Sample_submission_date | Feb 24 2009
| | Sample_last_update_date | Jun 10 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells transduced with MIGR1-GFP control vector. GFP-positive cells isolated by FACS 42 hours following transduction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Trizol and the Qiagen RNeasy kit.
| | Sample_label_ch1 | Phycoerythrin
| | Sample_label_protocol_ch1 | Manufacturer's (Affymetrix) protocol
| | Sample_hyb_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_scan_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_data_processing | Expression data was extracted from the resulting CEL files using GenePattern's implementation of the GCRMA algorithm with quantile normalization, and MAS5 algorithm for present/absent calls.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Charles,,Bailey
| | Sample_contact_email | baileych@mail.med.upenn.edu
| | Sample_contact_department | Pediatrics
| | Sample_contact_institute | Children's Hospital of Philadelphia
| | Sample_contact_address | Oncology/4 Wood, 1 Children's Center
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM374nnn/GSM374047/suppl/GSM374047.CEL.gz
| | Sample_series_id | GSE14980
| | Sample_data_row_count | 45101
| | |
|
GSM374048 | GPL1261 |
|
G1ME_Vector_Control_42hour_repC
|
G1ME cell line transduced with MIGR1 vector control
|
cell line: G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line
|
G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line, transduced with MIGR1-GFP control vector. GFP-positive cells isolated by FACS 42 hours following transduction. Replicate C.
|
| Sample_geo_accession | GSM374048
| | Sample_status | Public on Jun 10 2009
| | Sample_submission_date | Feb 24 2009
| | Sample_last_update_date | Jun 10 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells transduced with MIGR1-GFP control vector. GFP-positive cells isolated by FACS 42 hours following transduction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Trizol and the Qiagen RNeasy kit.
| | Sample_label_ch1 | Phycoerythrin
| | Sample_label_protocol_ch1 | Manufacturer's (Affymetrix) protocol
| | Sample_hyb_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_scan_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_data_processing | Expression data was extracted from the resulting CEL files using GenePattern's implementation of the GCRMA algorithm with quantile normalization, and MAS5 algorithm for present/absent calls.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Charles,,Bailey
| | Sample_contact_email | baileych@mail.med.upenn.edu
| | Sample_contact_department | Pediatrics
| | Sample_contact_institute | Children's Hospital of Philadelphia
| | Sample_contact_address | Oncology/4 Wood, 1 Children's Center
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM374nnn/GSM374048/suppl/GSM374048.CEL.gz
| | Sample_series_id | GSE14980
| | Sample_data_row_count | 45101
| | |
|
GSM374049 | GPL1261 |
|
G1ME_GATA1_42hour_repA
|
G1ME cell line transduced with GATA1-expressing construct
|
cell line: G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line
|
G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line, transduced with MIGR1-GFP vector expressing GATA1. GFP-positive cells isolated by FACS 42 hours following transduction. Replicate A.
|
| Sample_geo_accession | GSM374049
| | Sample_status | Public on Jun 10 2009
| | Sample_submission_date | Feb 24 2009
| | Sample_last_update_date | Jun 10 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells transduced with MIGR1-GFP vector expressing GATA1. GFP-positive cells isolated by FACS 42 hours following transduction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Trizol and the Qiagen RNeasy kit.
| | Sample_label_ch1 | Phycoerythrin
| | Sample_label_protocol_ch1 | Manufacturer's (Affymetrix) protocol
| | Sample_hyb_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_scan_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_data_processing | Expression data was extracted from the resulting CEL files using GenePattern's implementation of the GCRMA algorithm with quantile normalization, and MAS5 algorithm for present/absent calls.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Charles,,Bailey
| | Sample_contact_email | baileych@mail.med.upenn.edu
| | Sample_contact_department | Pediatrics
| | Sample_contact_institute | Children's Hospital of Philadelphia
| | Sample_contact_address | Oncology/4 Wood, 1 Children's Center
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM374nnn/GSM374049/suppl/GSM374049.CEL.gz
| | Sample_series_id | GSE14980
| | Sample_data_row_count | 45101
| | |
|
GSM374050 | GPL1261 |
|
G1ME_GATA1_42hour_repB
|
G1ME cell line transduced with GATA1-expressing construct
|
cell line: G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line
|
G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line, transduced with MIGR1-GFP vector expressing GATA1. GFP-positive cells isolated by FACS 42 hours following transduction. Replicate B.
|
| Sample_geo_accession | GSM374050
| | Sample_status | Public on Jun 10 2009
| | Sample_submission_date | Feb 24 2009
| | Sample_last_update_date | Jun 10 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells transduced with MIGR1-GFP vector expressing GATA1. GFP-positive cells isolated by FACS 42 hours following transduction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Trizol and the Qiagen RNeasy kit.
| | Sample_label_ch1 | Phycoerythrin
| | Sample_label_protocol_ch1 | Manufacturer's (Affymetrix) protocol
| | Sample_hyb_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_scan_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_data_processing | Expression data was extracted from the resulting CEL files using GenePattern's implementation of the GCRMA algorithm with quantile normalization, and MAS5 algorithm for present/absent calls.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Charles,,Bailey
| | Sample_contact_email | baileych@mail.med.upenn.edu
| | Sample_contact_department | Pediatrics
| | Sample_contact_institute | Children's Hospital of Philadelphia
| | Sample_contact_address | Oncology/4 Wood, 1 Children's Center
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM374nnn/GSM374050/suppl/GSM374050.CEL.gz
| | Sample_series_id | GSE14980
| | Sample_data_row_count | 45101
| | |
|
GSM374051 | GPL1261 |
|
G1ME_GATA1_42hour_repC
|
G1ME cell line transduced with GATA1-expressing construct
|
cell line: G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line
|
G1ME Gata1-negative murine megakaryocyte-erythrocyte progenitor cell line, transduced with MIGR1-GFP vector expressing GATA1. GFP-positive cells isolated by FACS 42 hours following transduction. Replicate C.
|
| Sample_geo_accession | GSM374051
| | Sample_status | Public on Jun 10 2009
| | Sample_submission_date | Feb 24 2009
| | Sample_last_update_date | Jun 10 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Cells transduced with MIGR1-GFP vector expressing GATA1. GFP-positive cells isolated by FACS 42 hours following transduction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted using Trizol and the Qiagen RNeasy kit.
| | Sample_label_ch1 | Phycoerythrin
| | Sample_label_protocol_ch1 | Manufacturer's (Affymetrix) protocol
| | Sample_hyb_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_scan_protocol | Manufacturer's (Affymetrix) protocol
| | Sample_data_processing | Expression data was extracted from the resulting CEL files using GenePattern's implementation of the GCRMA algorithm with quantile normalization, and MAS5 algorithm for present/absent calls.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Charles,,Bailey
| | Sample_contact_email | baileych@mail.med.upenn.edu
| | Sample_contact_department | Pediatrics
| | Sample_contact_institute | Children's Hospital of Philadelphia
| | Sample_contact_address | Oncology/4 Wood, 1 Children's Center
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM374nnn/GSM374051/suppl/GSM374051.CEL.gz
| | Sample_series_id | GSE14980
| | Sample_data_row_count | 45101
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Make groups for comparisons |
(2 groups will be compared at a time) |
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| Select GSMs and click on "Add groups" |
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