Search results for the GEO ID: GSE15195  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM379295 | GPL1261 |
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wild-type rep1
|
MF1 wild-type mice
|
tissue: bone marrow
genotype: wild-type
age: 12-16 weeks old
strain: MF1
cell type: Lin-/Sca1-/cKit+ cells
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Gene expression data from Lin-/Sca1-/cKit+ cells of wild-type mice.
|
| Sample_geo_accession | GSM379295
| | Sample_status | Public on Sep 04 2012
| | Sample_submission_date | Mar 11 2009
| | Sample_last_update_date | Sep 04 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | AE9a leukemia mice were generated by transplantation of AE9a transduced hematopoietic progenitor cells into lethally-irradiated adult MF1 mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNeasy Mini column extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 200 ng total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Standard Affymetrix recommended protocols were followed for all hybridization, wash, stain and scanning steps (see the attached EXP files).
| | Sample_scan_protocol | Standard Affymetrix recommended protocols were followed for all hybridization, wash, stain and scanning steps (see the attached EXP files).
| | Sample_data_processing | The data were analyzed using the RMA algorithm. Affymetrix default analysis settings and global scaling were used as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Dong-Er,,Zhang
| | Sample_contact_email | d7zhang@ucsd.edu
| | Sample_contact_phone | 858-822-5372
| | Sample_contact_fax | 858-822-5433
| | Sample_contact_laboratory | Zhang
| | Sample_contact_department | Cancer Center
| | Sample_contact_institute | University of California San Diego
| | Sample_contact_address | 3855 Health Sciences Drive, Mail Stop 0815
| | Sample_contact_city | La Jolla
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92093
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM379nnn/GSM379295/suppl/GSM379295.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM379nnn/GSM379295/suppl/GSM379295.EXP.gz
| | Sample_series_id | GSE15195
| | Sample_data_row_count | 28821
| | |
|
GSM379296 | GPL1261 |
|
wild-type rep2
|
MF1 wild-type mice
|
tissue: bone marrow
genotype: wild-type
age: 12-16 weeks old
strain: MF1
cell type: Lin-/Sca1-/cKit+ cells
|
Gene expression data from Lin-/Sca1-/cKit+ cells of wild-type mice.
|
| Sample_geo_accession | GSM379296
| | Sample_status | Public on Sep 04 2012
| | Sample_submission_date | Mar 11 2009
| | Sample_last_update_date | Sep 04 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | AE9a leukemia mice were generated by transplantation of AE9a transduced hematopoietic progenitor cells into lethally-irradiated adult MF1 mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNeasy Mini column extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 200 ng total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Standard Affymetrix recommended protocols were followed for all hybridization, wash, stain and scanning steps (see the attached EXP files).
| | Sample_scan_protocol | Standard Affymetrix recommended protocols were followed for all hybridization, wash, stain and scanning steps (see the attached EXP files).
| | Sample_data_processing | The data were analyzed using the RMA algorithm. Affymetrix default analysis settings and global scaling were used as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Dong-Er,,Zhang
| | Sample_contact_email | d7zhang@ucsd.edu
| | Sample_contact_phone | 858-822-5372
| | Sample_contact_fax | 858-822-5433
| | Sample_contact_laboratory | Zhang
| | Sample_contact_department | Cancer Center
| | Sample_contact_institute | University of California San Diego
| | Sample_contact_address | 3855 Health Sciences Drive, Mail Stop 0815
| | Sample_contact_city | La Jolla
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92093
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM379nnn/GSM379296/suppl/GSM379296.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM379nnn/GSM379296/suppl/GSM379296.EXP.gz
| | Sample_series_id | GSE15195
| | Sample_data_row_count | 28821
| | |
|
GSM379297 | GPL1261 |
|
wild-type rep3
|
MF1 wild-type mice
|
tissue: bone marrow
genotype: wild-type
age: 12-16 weeks old
strain: MF1
cell type: Lin-/Sca1-/cKit+ cells
|
Gene expression data from Lin-/Sca1-/cKit+ cells of wild-type mice.
|
| Sample_geo_accession | GSM379297
| | Sample_status | Public on Sep 04 2012
| | Sample_submission_date | Mar 11 2009
| | Sample_last_update_date | Sep 04 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | AE9a leukemia mice were generated by transplantation of AE9a transduced hematopoietic progenitor cells into lethally-irradiated adult MF1 mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNeasy Mini column extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 200 ng total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Standard Affymetrix recommended protocols were followed for all hybridization, wash, stain and scanning steps (see the attached EXP files).
| | Sample_scan_protocol | Standard Affymetrix recommended protocols were followed for all hybridization, wash, stain and scanning steps (see the attached EXP files).
| | Sample_data_processing | The data were analyzed using the RMA algorithm. Affymetrix default analysis settings and global scaling were used as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Dong-Er,,Zhang
| | Sample_contact_email | d7zhang@ucsd.edu
| | Sample_contact_phone | 858-822-5372
| | Sample_contact_fax | 858-822-5433
| | Sample_contact_laboratory | Zhang
| | Sample_contact_department | Cancer Center
| | Sample_contact_institute | University of California San Diego
| | Sample_contact_address | 3855 Health Sciences Drive, Mail Stop 0815
| | Sample_contact_city | La Jolla
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92093
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM379nnn/GSM379297/suppl/GSM379297.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM379nnn/GSM379297/suppl/GSM379297.EXP.gz
| | Sample_series_id | GSE15195
| | Sample_data_row_count | 28821
| | |
|
GSM379298 | GPL1261 |
|
leukemia rep1
|
MF1 AE9a leukemia mouse #1
|
tissue: spleen
genotype: wild-type mouse transplanted with AE9a transduced hematopoietic progenitor cells
age: 12-16 weeks old
strain: MF1
cell type: Lin-/Sca1-/cKit+ cells
|
Gene expression data from Lin-/Sca1-/cKit+ cells of AE9a leukemia mice.
|
| Sample_geo_accession | GSM379298
| | Sample_status | Public on Sep 04 2012
| | Sample_submission_date | Mar 11 2009
| | Sample_last_update_date | Sep 04 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | AE9a leukemia mice were generated by transplantation of AE9a transduced hematopoietic progenitor cells into lethally-irradiated adult MF1 mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNeasy Mini column extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 200 ng total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Standard Affymetrix recommended protocols were followed for all hybridization, wash, stain and scanning steps (see the attached EXP files).
| | Sample_scan_protocol | Standard Affymetrix recommended protocols were followed for all hybridization, wash, stain and scanning steps (see the attached EXP files).
| | Sample_data_processing | The data were analyzed using the RMA algorithm. Affymetrix default analysis settings and global scaling were used as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Dong-Er,,Zhang
| | Sample_contact_email | d7zhang@ucsd.edu
| | Sample_contact_phone | 858-822-5372
| | Sample_contact_fax | 858-822-5433
| | Sample_contact_laboratory | Zhang
| | Sample_contact_department | Cancer Center
| | Sample_contact_institute | University of California San Diego
| | Sample_contact_address | 3855 Health Sciences Drive, Mail Stop 0815
| | Sample_contact_city | La Jolla
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92093
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM379nnn/GSM379298/suppl/GSM379298.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM379nnn/GSM379298/suppl/GSM379298.EXP.gz
| | Sample_series_id | GSE15195
| | Sample_data_row_count | 28821
| | |
|
GSM379299 | GPL1261 |
|
leukemia rep2
|
MF1 AE9a leukemia mouse #2
|
tissue: spleen
genotype: wild-type mouse transplanted with AE9a transduced hematopoietic progenitor cells
age: 12-16 weeks old
strain: MF1
cell type: Lin-/Sca1-/cKit+ cells
|
Gene expression data from Lin-/Sca1-/cKit+ cells of AE9a leukemia mice.
|
| Sample_geo_accession | GSM379299
| | Sample_status | Public on Sep 04 2012
| | Sample_submission_date | Mar 11 2009
| | Sample_last_update_date | Sep 04 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | AE9a leukemia mice were generated by transplantation of AE9a transduced hematopoietic progenitor cells into lethally-irradiated adult MF1 mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNeasy Mini column extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 200 ng total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Standard Affymetrix recommended protocols were followed for all hybridization, wash, stain and scanning steps (see the attached EXP files).
| | Sample_scan_protocol | Standard Affymetrix recommended protocols were followed for all hybridization, wash, stain and scanning steps (see the attached EXP files).
| | Sample_data_processing | The data were analyzed using the RMA algorithm. Affymetrix default analysis settings and global scaling were used as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Dong-Er,,Zhang
| | Sample_contact_email | d7zhang@ucsd.edu
| | Sample_contact_phone | 858-822-5372
| | Sample_contact_fax | 858-822-5433
| | Sample_contact_laboratory | Zhang
| | Sample_contact_department | Cancer Center
| | Sample_contact_institute | University of California San Diego
| | Sample_contact_address | 3855 Health Sciences Drive, Mail Stop 0815
| | Sample_contact_city | La Jolla
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92093
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM379nnn/GSM379299/suppl/GSM379299.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM379nnn/GSM379299/suppl/GSM379299.EXP.gz
| | Sample_series_id | GSE15195
| | Sample_data_row_count | 28821
| | |
|
GSM379300 | GPL1261 |
|
leukemia rep3
|
MF1 AE9a leukemia mouse #3
|
tissue: spleen
genotype: wild-type mouse transplanted with AE9a transduced hematopoietic progenitor cells
age: 12-16 weeks old
strain: MF1
cell type: Lin-/Sca1-/cKit+ cells
|
Gene expression data from Lin-/Sca1-/cKit+ cells of AE9a leukemia mice.
|
| Sample_geo_accession | GSM379300
| | Sample_status | Public on Sep 04 2012
| | Sample_submission_date | Mar 11 2009
| | Sample_last_update_date | Sep 04 2012
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | AE9a leukemia mice were generated by transplantation of AE9a transduced hematopoietic progenitor cells into lethally-irradiated adult MF1 mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNeasy Mini column extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 200 ng total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Standard Affymetrix recommended protocols were followed for all hybridization, wash, stain and scanning steps (see the attached EXP files).
| | Sample_scan_protocol | Standard Affymetrix recommended protocols were followed for all hybridization, wash, stain and scanning steps (see the attached EXP files).
| | Sample_data_processing | The data were analyzed using the RMA algorithm. Affymetrix default analysis settings and global scaling were used as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Dong-Er,,Zhang
| | Sample_contact_email | d7zhang@ucsd.edu
| | Sample_contact_phone | 858-822-5372
| | Sample_contact_fax | 858-822-5433
| | Sample_contact_laboratory | Zhang
| | Sample_contact_department | Cancer Center
| | Sample_contact_institute | University of California San Diego
| | Sample_contact_address | 3855 Health Sciences Drive, Mail Stop 0815
| | Sample_contact_city | La Jolla
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92093
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM379nnn/GSM379300/suppl/GSM379300.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM379nnn/GSM379300/suppl/GSM379300.EXP.gz
| | Sample_series_id | GSE15195
| | Sample_data_row_count | 28821
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