Search results for the GEO ID: GSE15232 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM380347 | GPL1261 |
|
Cardiac Progenitor WT1
|
Embryonic Cardiac Progenitors - wild type
|
cell type: E9.0 embryonic cardiac progenitors
|
YFP+ cells marking precardiac mesoderm were FACS-sorted (w/wo stabilized Beta-catenin), and their total RNA was isolated, amplified and labeled with the NUGENE pico kit for microarray analyses. Mutant samples were obtained from YFP+ cells isolated from embryos with Isl1-cre, Rosa-YFP, Beta-catenin (loxP ex3). The mutants are conditional knockout mouse embryos that activates stable Beta-catenin in cardiac progenitors.
|
Sample_geo_accession | GSM380347
| Sample_status | Public on May 13 2009
| Sample_submission_date | Mar 13 2009
| Sample_last_update_date | Mar 16 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Total RNA was amplified with the WT-Ovation Pico RNA Amplification System, fragmented and labeled with the FL-Ovation cDNA Biotin Module V2 (Nugen).
| Sample_hyb_protocol | Performed as manufacturer's protocol (Affymetrics)
| Sample_scan_protocol | Performed as manufacturer's protocol (Affymetrics)
| Sample_data_processing | Raw data generated from at least three independent experiments were further analyzed by the group of Dr. Ru-Fang Yeh at the Center for Informatics and Molecular Biostatistics, UCSF.
| Sample_platform_id | GPL1261
| Sample_contact_name | Chulan,,Kwon
| Sample_contact_email | ckwon@gladstone.ucsf.edu
| Sample_contact_institute | Gladstone Institutes
| Sample_contact_address | 1650 Owens Street
| Sample_contact_city | San Francisco
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94158
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM380nnn/GSM380347/suppl/GSM380347.CEL.gz
| Sample_series_id | GSE15232
| Sample_data_row_count | 45101
| |
|
GSM380348 | GPL1261 |
|
Cardiac Progenitor WT2
|
Embryonic Cardiac Progenitors - wild type
|
cell type: E9.0 embryonic cardiac progenitors
|
YFP+ cells marking precardiac mesoderm were FACS-sorted (w/wo stabilized Beta-catenin), and their total RNA was isolated, amplified and labeled with the NUGENE pico kit for microarray analyses. Mutant samples were obtained from YFP+ cells isolated from embryos with Isl1-cre, Rosa-YFP, Beta-catenin (loxP ex3). The mutants are conditional knockout mouse embryos that activates stable Beta-catenin in cardiac progenitors.
|
Sample_geo_accession | GSM380348
| Sample_status | Public on May 13 2009
| Sample_submission_date | Mar 13 2009
| Sample_last_update_date | Mar 16 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Total RNA was amplified with the WT-Ovation Pico RNA Amplification System, fragmented and labeled with the FL-Ovation cDNA Biotin Module V2 (Nugen).
| Sample_hyb_protocol | Performed as manufacturer's protocol (Affymetrics)
| Sample_scan_protocol | Performed as manufacturer's protocol (Affymetrics)
| Sample_data_processing | Raw data generated from at least three independent experiments were further analyzed by the group of Dr. Ru-Fang Yeh at the Center for Informatics and Molecular Biostatistics, UCSF.
| Sample_platform_id | GPL1261
| Sample_contact_name | Chulan,,Kwon
| Sample_contact_email | ckwon@gladstone.ucsf.edu
| Sample_contact_institute | Gladstone Institutes
| Sample_contact_address | 1650 Owens Street
| Sample_contact_city | San Francisco
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94158
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM380nnn/GSM380348/suppl/GSM380348.CEL.gz
| Sample_series_id | GSE15232
| Sample_data_row_count | 45101
| |
|
GSM380349 | GPL1261 |
|
Cardiac Progenitor WT3
|
Embryonic Cardiac Progenitors - wild type
|
cell type: E9.0 embryonic cardiac progenitors
|
YFP+ cells marking precardiac mesoderm were FACS-sorted (w/wo stabilized Beta-catenin), and their total RNA was isolated, amplified and labeled with the NUGENE pico kit for microarray analyses. Mutant samples were obtained from YFP+ cells isolated from embryos with Isl1-cre, Rosa-YFP, Beta-catenin (loxP ex3). The mutants are conditional knockout mouse embryos that activates stable Beta-catenin in cardiac progenitors.
|
Sample_geo_accession | GSM380349
| Sample_status | Public on May 13 2009
| Sample_submission_date | Mar 13 2009
| Sample_last_update_date | Mar 16 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Total RNA was amplified with the WT-Ovation Pico RNA Amplification System, fragmented and labeled with the FL-Ovation cDNA Biotin Module V2 (Nugen).
| Sample_hyb_protocol | Performed as manufacturer's protocol (Affymetrics)
| Sample_scan_protocol | Performed as manufacturer's protocol (Affymetrics)
| Sample_data_processing | Raw data generated from at least three independent experiments were further analyzed by the group of Dr. Ru-Fang Yeh at the Center for Informatics and Molecular Biostatistics, UCSF.
| Sample_platform_id | GPL1261
| Sample_contact_name | Chulan,,Kwon
| Sample_contact_email | ckwon@gladstone.ucsf.edu
| Sample_contact_institute | Gladstone Institutes
| Sample_contact_address | 1650 Owens Street
| Sample_contact_city | San Francisco
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94158
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM380nnn/GSM380349/suppl/GSM380349.CEL.gz
| Sample_series_id | GSE15232
| Sample_data_row_count | 45101
| |
|
GSM380350 | GPL1261 |
|
Cardiac Progenitor MUT1
|
Embryonic Cardiac Progenitors - mutant
|
cell type: E9.0 embryonic cardiac progenitors
|
YFP+ cells marking precardiac mesoderm were FACS-sorted (w/wo stabilized Beta-catenin), and their total RNA was isolated, amplified and labeled with the NUGENE pico kit for microarray analyses. Mutant samples were obtained from YFP+ cells isolated from embryos with Isl1-cre, Rosa-YFP, Beta-catenin (loxP ex3). The mutants are conditional knockout mouse embryos that activates stable Beta-catenin in cardiac progenitors.
|
Sample_geo_accession | GSM380350
| Sample_status | Public on May 13 2009
| Sample_submission_date | Mar 13 2009
| Sample_last_update_date | Mar 16 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Total RNA was amplified with the WT-Ovation Pico RNA Amplification System, fragmented and labeled with the FL-Ovation cDNA Biotin Module V2 (Nugen).
| Sample_hyb_protocol | Performed as manufacturer's protocol (Affymetrics)
| Sample_scan_protocol | Performed as manufacturer's protocol (Affymetrics)
| Sample_data_processing | Raw data generated from at least three independent experiments were further analyzed by the group of Dr. Ru-Fang Yeh at the Center for Informatics and Molecular Biostatistics, UCSF.
| Sample_platform_id | GPL1261
| Sample_contact_name | Chulan,,Kwon
| Sample_contact_email | ckwon@gladstone.ucsf.edu
| Sample_contact_institute | Gladstone Institutes
| Sample_contact_address | 1650 Owens Street
| Sample_contact_city | San Francisco
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94158
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM380nnn/GSM380350/suppl/GSM380350.CEL.gz
| Sample_series_id | GSE15232
| Sample_data_row_count | 45101
| |
|
GSM380351 | GPL1261 |
|
Cardiac Progenitor MUT2
|
Embryonic Cardiac Progenitors - mutant
|
cell type: E9.0 embryonic cardiac progenitors
|
YFP+ cells marking precardiac mesoderm were FACS-sorted (w/wo stabilized Beta-catenin), and their total RNA was isolated, amplified and labeled with the NUGENE pico kit for microarray analyses. Mutant samples were obtained from YFP+ cells isolated from embryos with Isl1-cre, Rosa-YFP, Beta-catenin (loxP ex3). The mutants are conditional knockout mouse embryos that activates stable Beta-catenin in cardiac progenitors.
|
Sample_geo_accession | GSM380351
| Sample_status | Public on May 13 2009
| Sample_submission_date | Mar 13 2009
| Sample_last_update_date | Mar 16 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Total RNA was amplified with the WT-Ovation Pico RNA Amplification System, fragmented and labeled with the FL-Ovation cDNA Biotin Module V2 (Nugen).
| Sample_hyb_protocol | Performed as manufacturer's protocol (Affymetrics)
| Sample_scan_protocol | Performed as manufacturer's protocol (Affymetrics)
| Sample_data_processing | Raw data generated from at least three independent experiments were further analyzed by the group of Dr. Ru-Fang Yeh at the Center for Informatics and Molecular Biostatistics, UCSF.
| Sample_platform_id | GPL1261
| Sample_contact_name | Chulan,,Kwon
| Sample_contact_email | ckwon@gladstone.ucsf.edu
| Sample_contact_institute | Gladstone Institutes
| Sample_contact_address | 1650 Owens Street
| Sample_contact_city | San Francisco
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94158
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM380nnn/GSM380351/suppl/GSM380351.CEL.gz
| Sample_series_id | GSE15232
| Sample_data_row_count | 45101
| |
|
GSM380352 | GPL1261 |
|
Cardiac Progenitor MUT3
|
Embryonic Cardiac Progenitors - mutant
|
cell type: E9.0 embryonic cardiac progenitors
|
YFP+ cells marking precardiac mesoderm were FACS-sorted (w/wo stabilized Beta-catenin), and their total RNA was isolated, amplified and labeled with the NUGENE pico kit for microarray analyses. Mutant samples were obtained from YFP+ cells isolated from embryos with Isl1-cre, Rosa-YFP, Beta-catenin (loxP ex3). The mutants are conditional knockout mouse embryos that activates stable Beta-catenin in cardiac progenitors.
|
Sample_geo_accession | GSM380352
| Sample_status | Public on May 13 2009
| Sample_submission_date | Mar 13 2009
| Sample_last_update_date | Mar 16 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol extraction
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | Total RNA was amplified with the WT-Ovation Pico RNA Amplification System, fragmented and labeled with the FL-Ovation cDNA Biotin Module V2 (Nugen).
| Sample_hyb_protocol | Performed as manufacturer's protocol (Affymetrics)
| Sample_scan_protocol | Performed as manufacturer's protocol (Affymetrics)
| Sample_data_processing | Raw data generated from at least three independent experiments were further analyzed by the group of Dr. Ru-Fang Yeh at the Center for Informatics and Molecular Biostatistics, UCSF.
| Sample_platform_id | GPL1261
| Sample_contact_name | Chulan,,Kwon
| Sample_contact_email | ckwon@gladstone.ucsf.edu
| Sample_contact_institute | Gladstone Institutes
| Sample_contact_address | 1650 Owens Street
| Sample_contact_city | San Francisco
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94158
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM380nnn/GSM380352/suppl/GSM380352.CEL.gz
| Sample_series_id | GSE15232
| Sample_data_row_count | 45101
| |
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