Search results for the GEO ID: GSE15349  |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM385406 | GPL1261 |
|
WT_Mstn_1
|
gastrocnemius muscle
|
gender: male
tissue: gastrocnemius muscle
age: 7.5 months
genotype: wild-type
|
male, 7.5 months old, normal myostatin genes, CAGG-CreER transgene, C57BL/6 background
|
| Sample_geo_accession | GSM385406
| | Sample_status | Public on Mar 24 2009
| | Sample_submission_date | Mar 23 2009
| | Sample_last_update_date | Mar 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | All mice received a series of 8 injections of tamoxifen starting at 4 months of age to activate Cre recombinase to knock out myostatin in mice with floxed myostatin genes.
| | Sample_growth_protocol_ch1 | Mice were reared under normal conditions with food and water ad libitum.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted into Trizol as recommended by supplier (Invitrogen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA was prepared with kits from NuGEN as recommended by supplier.
| | Sample_hyb_protocol | Hybridization, washes, and staining with phycoerythrin-streptavidin (including antibody enhancement step) were carried out as recommended by Affymetrix for eukaryotic expression arrays, using hybridization oven and fluidics station purchased from Affymetrix.
| | Sample_scan_protocol | Scans were done with Affymetrix scanner exactly as recommended by Affymetrix.
| | Sample_data_processing | background subtraction and normalization were done with the GCRMA method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Stephen,,Welle
| | Sample_contact_email | stephen_welle@urmc.rochester.edu
| | Sample_contact_institute | University of Rochester
| | Sample_contact_address | 601 Elmwood Avenue
| | Sample_contact_city | Rochester
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14642
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM385nnn/GSM385406/suppl/GSM385406.CEL.gz
| | Sample_series_id | GSE15349
| | Sample_data_row_count | 45101
| | |
|
GSM385407 | GPL1261 |
|
WT_Mstn_2
|
gastrocnemius muscle
|
gender: male
tissue: gastrocnemius muscle
age: 7.5 months
genotype: wild-type
|
male, 7.5 months old, normal myostatin genes, CAGG-CreER transgene, C57BL/6 background
|
| Sample_geo_accession | GSM385407
| | Sample_status | Public on Mar 24 2009
| | Sample_submission_date | Mar 23 2009
| | Sample_last_update_date | Mar 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | All mice received a series of 8 injections of tamoxifen starting at 4 months of age to activate Cre recombinase to knock out myostatin in mice with floxed myostatin genes.
| | Sample_growth_protocol_ch1 | Mice were reared under normal conditions with food and water ad libitum.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted into Trizol as recommended by supplier (Invitrogen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA was prepared with kits from NuGEN as recommended by supplier.
| | Sample_hyb_protocol | Hybridization, washes, and staining with phycoerythrin-streptavidin (including antibody enhancement step) were carried out as recommended by Affymetrix for eukaryotic expression arrays, using hybridization oven and fluidics station purchased from Affymetrix.
| | Sample_scan_protocol | Scans were done with Affymetrix scanner exactly as recommended by Affymetrix.
| | Sample_data_processing | background subtraction and normalization were done with the GCRMA method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Stephen,,Welle
| | Sample_contact_email | stephen_welle@urmc.rochester.edu
| | Sample_contact_institute | University of Rochester
| | Sample_contact_address | 601 Elmwood Avenue
| | Sample_contact_city | Rochester
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14642
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM385nnn/GSM385407/suppl/GSM385407.CEL.gz
| | Sample_series_id | GSE15349
| | Sample_data_row_count | 45101
| | |
|
GSM385408 | GPL1261 |
|
WT_Mstn_3
|
gastrocnemius muscle
|
gender: male
tissue: gastrocnemius muscle
age: 7.5 months
genotype: wild-type
|
male, 7.5 months old, normal myostatin genes, CAGG-CreER transgene, C57BL/6 background
|
| Sample_geo_accession | GSM385408
| | Sample_status | Public on Mar 24 2009
| | Sample_submission_date | Mar 23 2009
| | Sample_last_update_date | Mar 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | All mice received a series of 8 injections of tamoxifen starting at 4 months of age to activate Cre recombinase to knock out myostatin in mice with floxed myostatin genes.
| | Sample_growth_protocol_ch1 | Mice were reared under normal conditions with food and water ad libitum.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted into Trizol as recommended by supplier (Invitrogen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA was prepared with kits from NuGEN as recommended by supplier.
| | Sample_hyb_protocol | Hybridization, washes, and staining with phycoerythrin-streptavidin (including antibody enhancement step) were carried out as recommended by Affymetrix for eukaryotic expression arrays, using hybridization oven and fluidics station purchased from Affymetrix.
| | Sample_scan_protocol | Scans were done with Affymetrix scanner exactly as recommended by Affymetrix.
| | Sample_data_processing | background subtraction and normalization were done with the GCRMA method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Stephen,,Welle
| | Sample_contact_email | stephen_welle@urmc.rochester.edu
| | Sample_contact_institute | University of Rochester
| | Sample_contact_address | 601 Elmwood Avenue
| | Sample_contact_city | Rochester
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14642
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM385nnn/GSM385408/suppl/GSM385408.CEL.gz
| | Sample_series_id | GSE15349
| | Sample_data_row_count | 45101
| | |
|
GSM385409 | GPL1261 |
|
WT_Mstn_4
|
gastrocnemius muscle
|
gender: male
tissue: gastrocnemius muscle
age: 7.5 months
genotype: wild-type
|
male, 7.5 months old, normal myostatin genes, CAGG-CreER transgene, C57BL/6 background
|
| Sample_geo_accession | GSM385409
| | Sample_status | Public on Mar 24 2009
| | Sample_submission_date | Mar 23 2009
| | Sample_last_update_date | Mar 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | All mice received a series of 8 injections of tamoxifen starting at 4 months of age to activate Cre recombinase to knock out myostatin in mice with floxed myostatin genes.
| | Sample_growth_protocol_ch1 | Mice were reared under normal conditions with food and water ad libitum.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted into Trizol as recommended by supplier (Invitrogen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA was prepared with kits from NuGEN as recommended by supplier.
| | Sample_hyb_protocol | Hybridization, washes, and staining with phycoerythrin-streptavidin (including antibody enhancement step) were carried out as recommended by Affymetrix for eukaryotic expression arrays, using hybridization oven and fluidics station purchased from Affymetrix.
| | Sample_scan_protocol | Scans were done with Affymetrix scanner exactly as recommended by Affymetrix.
| | Sample_data_processing | background subtraction and normalization were done with the GCRMA method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Stephen,,Welle
| | Sample_contact_email | stephen_welle@urmc.rochester.edu
| | Sample_contact_institute | University of Rochester
| | Sample_contact_address | 601 Elmwood Avenue
| | Sample_contact_city | Rochester
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14642
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM385nnn/GSM385409/suppl/GSM385409.CEL.gz
| | Sample_series_id | GSE15349
| | Sample_data_row_count | 45101
| | |
|
GSM385410 | GPL1261 |
|
WT_Mstn_5
|
gastrocnemius muscle
|
gender: male
tissue: gastrocnemius muscle
age: 7.5 months
genotype: wild-type
|
male, 7.5 months old, normal myostatin genes, CAGG-CreER transgene, C57BL/6 background
|
| Sample_geo_accession | GSM385410
| | Sample_status | Public on Mar 24 2009
| | Sample_submission_date | Mar 23 2009
| | Sample_last_update_date | Mar 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | All mice received a series of 8 injections of tamoxifen starting at 4 months of age to activate Cre recombinase to knock out myostatin in mice with floxed myostatin genes.
| | Sample_growth_protocol_ch1 | Mice were reared under normal conditions with food and water ad libitum.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted into Trizol as recommended by supplier (Invitrogen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA was prepared with kits from NuGEN as recommended by supplier.
| | Sample_hyb_protocol | Hybridization, washes, and staining with phycoerythrin-streptavidin (including antibody enhancement step) were carried out as recommended by Affymetrix for eukaryotic expression arrays, using hybridization oven and fluidics station purchased from Affymetrix.
| | Sample_scan_protocol | Scans were done with Affymetrix scanner exactly as recommended by Affymetrix.
| | Sample_data_processing | background subtraction and normalization were done with the GCRMA method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Stephen,,Welle
| | Sample_contact_email | stephen_welle@urmc.rochester.edu
| | Sample_contact_institute | University of Rochester
| | Sample_contact_address | 601 Elmwood Avenue
| | Sample_contact_city | Rochester
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14642
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM385nnn/GSM385410/suppl/GSM385410.CEL.gz
| | Sample_series_id | GSE15349
| | Sample_data_row_count | 45101
| | |
|
GSM385411 | GPL1261 |
|
Floxed_Mstn_1
|
gastrocnemius muscle
|
gender: male
tissue: gastrocnemius muscle
age: 7.5 months
genotype: Mstn ko
|
male, 7.5 months old, floxed myostatin genes, CAGG-CreER transgene, C57BL/6 background
|
| Sample_geo_accession | GSM385411
| | Sample_status | Public on Mar 24 2009
| | Sample_submission_date | Mar 23 2009
| | Sample_last_update_date | Mar 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | All mice received a series of 8 injections of tamoxifen starting at 4 months of age to activate Cre recombinase to knock out myostatin in mice with floxed myostatin genes.
| | Sample_growth_protocol_ch1 | Mice were reared under normal conditions with food and water ad libitum.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted into Trizol as recommended by supplier (Invitrogen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA was prepared with kits from NuGEN as recommended by supplier.
| | Sample_hyb_protocol | Hybridization, washes, and staining with phycoerythrin-streptavidin (including antibody enhancement step) were carried out as recommended by Affymetrix for eukaryotic expression arrays, using hybridization oven and fluidics station purchased from Affymetrix.
| | Sample_scan_protocol | Scans were done with Affymetrix scanner exactly as recommended by Affymetrix.
| | Sample_data_processing | background subtraction and normalization were done with the GCRMA method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Stephen,,Welle
| | Sample_contact_email | stephen_welle@urmc.rochester.edu
| | Sample_contact_institute | University of Rochester
| | Sample_contact_address | 601 Elmwood Avenue
| | Sample_contact_city | Rochester
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14642
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM385nnn/GSM385411/suppl/GSM385411.CEL.gz
| | Sample_series_id | GSE15349
| | Sample_data_row_count | 45101
| | |
|
GSM385412 | GPL1261 |
|
Floxed_Mstn_2
|
gastrocnemius muscle
|
gender: male
tissue: gastrocnemius muscle
age: 7.5 months
genotype: Mstn ko
|
male, 7.5 months old, floxed myostatin genes, CAGG-CreER transgene, C57BL/6 background
|
| Sample_geo_accession | GSM385412
| | Sample_status | Public on Mar 24 2009
| | Sample_submission_date | Mar 23 2009
| | Sample_last_update_date | Mar 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | All mice received a series of 8 injections of tamoxifen starting at 4 months of age to activate Cre recombinase to knock out myostatin in mice with floxed myostatin genes.
| | Sample_growth_protocol_ch1 | Mice were reared under normal conditions with food and water ad libitum.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted into Trizol as recommended by supplier (Invitrogen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA was prepared with kits from NuGEN as recommended by supplier.
| | Sample_hyb_protocol | Hybridization, washes, and staining with phycoerythrin-streptavidin (including antibody enhancement step) were carried out as recommended by Affymetrix for eukaryotic expression arrays, using hybridization oven and fluidics station purchased from Affymetrix.
| | Sample_scan_protocol | Scans were done with Affymetrix scanner exactly as recommended by Affymetrix.
| | Sample_data_processing | background subtraction and normalization were done with the GCRMA method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Stephen,,Welle
| | Sample_contact_email | stephen_welle@urmc.rochester.edu
| | Sample_contact_institute | University of Rochester
| | Sample_contact_address | 601 Elmwood Avenue
| | Sample_contact_city | Rochester
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14642
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM385nnn/GSM385412/suppl/GSM385412.CEL.gz
| | Sample_series_id | GSE15349
| | Sample_data_row_count | 45101
| | |
|
GSM385413 | GPL1261 |
|
Floxed_Mstn_3
|
gastrocnemius muscle
|
gender: male
tissue: gastrocnemius muscle
age: 7.5 months
genotype: Mstn ko
|
male, 7.5 months old, floxed myostatin genes, CAGG-CreER transgene, C57BL/6 background
|
| Sample_geo_accession | GSM385413
| | Sample_status | Public on Mar 24 2009
| | Sample_submission_date | Mar 23 2009
| | Sample_last_update_date | Mar 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | All mice received a series of 8 injections of tamoxifen starting at 4 months of age to activate Cre recombinase to knock out myostatin in mice with floxed myostatin genes.
| | Sample_growth_protocol_ch1 | Mice were reared under normal conditions with food and water ad libitum.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted into Trizol as recommended by supplier (Invitrogen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA was prepared with kits from NuGEN as recommended by supplier.
| | Sample_hyb_protocol | Hybridization, washes, and staining with phycoerythrin-streptavidin (including antibody enhancement step) were carried out as recommended by Affymetrix for eukaryotic expression arrays, using hybridization oven and fluidics station purchased from Affymetrix.
| | Sample_scan_protocol | Scans were done with Affymetrix scanner exactly as recommended by Affymetrix.
| | Sample_data_processing | background subtraction and normalization were done with the GCRMA method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Stephen,,Welle
| | Sample_contact_email | stephen_welle@urmc.rochester.edu
| | Sample_contact_institute | University of Rochester
| | Sample_contact_address | 601 Elmwood Avenue
| | Sample_contact_city | Rochester
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14642
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM385nnn/GSM385413/suppl/GSM385413.CEL.gz
| | Sample_series_id | GSE15349
| | Sample_data_row_count | 45101
| | |
|
GSM385414 | GPL1261 |
|
Floxed_Mstn_4
|
gastrocnemius muscle
|
gender: male
tissue: gastrocnemius muscle
age: 7.5 months
genotype: Mstn ko
|
male, 7.5 months old, floxed myostatin genes, CAGG-CreER transgene, C57BL/6 background
|
| Sample_geo_accession | GSM385414
| | Sample_status | Public on Mar 24 2009
| | Sample_submission_date | Mar 23 2009
| | Sample_last_update_date | Mar 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | All mice received a series of 8 injections of tamoxifen starting at 4 months of age to activate Cre recombinase to knock out myostatin in mice with floxed myostatin genes.
| | Sample_growth_protocol_ch1 | Mice were reared under normal conditions with food and water ad libitum.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted into Trizol as recommended by supplier (Invitrogen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA was prepared with kits from NuGEN as recommended by supplier.
| | Sample_hyb_protocol | Hybridization, washes, and staining with phycoerythrin-streptavidin (including antibody enhancement step) were carried out as recommended by Affymetrix for eukaryotic expression arrays, using hybridization oven and fluidics station purchased from Affymetrix.
| | Sample_scan_protocol | Scans were done with Affymetrix scanner exactly as recommended by Affymetrix.
| | Sample_data_processing | background subtraction and normalization were done with the GCRMA method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Stephen,,Welle
| | Sample_contact_email | stephen_welle@urmc.rochester.edu
| | Sample_contact_institute | University of Rochester
| | Sample_contact_address | 601 Elmwood Avenue
| | Sample_contact_city | Rochester
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14642
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM385nnn/GSM385414/suppl/GSM385414.CEL.gz
| | Sample_series_id | GSE15349
| | Sample_data_row_count | 45101
| | |
|
GSM385415 | GPL1261 |
|
Floxed_Mstn_5
|
gastrocnemius muscle
|
gender: male
tissue: gastrocnemius muscle
age: 7.5 months
genotype: Mstn ko
|
male, 7.5 months old, floxed myostatin genes, CAGG-CreER transgene, C57BL/6 background
|
| Sample_geo_accession | GSM385415
| | Sample_status | Public on Mar 24 2009
| | Sample_submission_date | Mar 23 2009
| | Sample_last_update_date | Mar 23 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | All mice received a series of 8 injections of tamoxifen starting at 4 months of age to activate Cre recombinase to knock out myostatin in mice with floxed myostatin genes.
| | Sample_growth_protocol_ch1 | Mice were reared under normal conditions with food and water ad libitum.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted into Trizol as recommended by supplier (Invitrogen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cDNA was prepared with kits from NuGEN as recommended by supplier.
| | Sample_hyb_protocol | Hybridization, washes, and staining with phycoerythrin-streptavidin (including antibody enhancement step) were carried out as recommended by Affymetrix for eukaryotic expression arrays, using hybridization oven and fluidics station purchased from Affymetrix.
| | Sample_scan_protocol | Scans were done with Affymetrix scanner exactly as recommended by Affymetrix.
| | Sample_data_processing | background subtraction and normalization were done with the GCRMA method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Stephen,,Welle
| | Sample_contact_email | stephen_welle@urmc.rochester.edu
| | Sample_contact_institute | University of Rochester
| | Sample_contact_address | 601 Elmwood Avenue
| | Sample_contact_city | Rochester
| | Sample_contact_state | NY
| | Sample_contact_zip/postal_code | 14642
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM385nnn/GSM385415/suppl/GSM385415.CEL.gz
| | Sample_series_id | GSE15349
| | Sample_data_row_count | 45101
| | |
|
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