Search results for the GEO ID: GSE15638 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM391369 | GPL339 |
|
MEF wt cells serum starved 16 h Set 1
|
Mouse embryonic fibroblasts (E11) passaged through crisis, cultured
|
strain: WT
|
N/A
|
Sample_geo_accession | GSM391369
| Sample_status | Public on Apr 14 2009
| Sample_submission_date | Apr 10 2009
| Sample_last_update_date | Apr 16 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | Starved 16 h in 0.5% FBS DMEM and then total RNA harvested (see below). First replicate.
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol and Qiagen RNeasy column purification.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | UCLA Microarray Core
| Sample_hyb_protocol | UCLA Microarray Core
| Sample_scan_protocol | UCLA Microarray Core
| Sample_data_processing | MAS5
| Sample_platform_id | GPL339
| Sample_contact_name | Michael,Andrew,Balamotis
| Sample_contact_email | mbalamo@gmail.com
| Sample_contact_laboratory | Kohwi-Shigematsu
| Sample_contact_department | Life Sciences
| Sample_contact_institute | Lawrence Berkeley National Lab
| Sample_contact_address | 1 Cycotron Rd. Bld. 84
| Sample_contact_city | Berkeley
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94720
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM391nnn/GSM391369/suppl/GSM391369.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM391nnn/GSM391369/suppl/GSM391369.CHP.gz
| Sample_series_id | GSE15638
| Sample_data_row_count | 22690
| |
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GSM391370 | GPL339 |
|
MEF wt cells serum starved 16 h Set 2
|
Mouse embryonic fibroblasts (E11) passaged through crisis, cultured
|
strain: WT
|
N/A
|
Sample_geo_accession | GSM391370
| Sample_status | Public on Apr 14 2009
| Sample_submission_date | Apr 10 2009
| Sample_last_update_date | Apr 16 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | Starved 16 h in 0.5% FBS DMEM and then total RNA harvested (see below). Second replicate.
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol and Qiagen RNeasy column purification.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | UCLA Microarray Core
| Sample_hyb_protocol | UCLA Microarray Core
| Sample_scan_protocol | UCLA Microarray Core
| Sample_data_processing | MAS5
| Sample_platform_id | GPL339
| Sample_contact_name | Michael,Andrew,Balamotis
| Sample_contact_email | mbalamo@gmail.com
| Sample_contact_laboratory | Kohwi-Shigematsu
| Sample_contact_department | Life Sciences
| Sample_contact_institute | Lawrence Berkeley National Lab
| Sample_contact_address | 1 Cycotron Rd. Bld. 84
| Sample_contact_city | Berkeley
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94720
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM391nnn/GSM391370/suppl/GSM391370.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM391nnn/GSM391370/suppl/GSM391370.CHP.gz
| Sample_series_id | GSE15638
| Sample_data_row_count | 22690
| |
|
GSM391371 | GPL339 |
|
MEF Med23-/- (KO) cells serum starved 16 h Set 1
|
Mouse Med23 -/- embryonic fibroblasts (E11) passaged through crisis, cultured
|
strain: Med23-/- (KO)
|
N/A
|
Sample_geo_accession | GSM391371
| Sample_status | Public on Apr 14 2009
| Sample_submission_date | Apr 10 2009
| Sample_last_update_date | Apr 16 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | Starved 16 h in 0.5% FBS DMEM and then total RNA harvested (see below). First replicate.
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol and Qiagen RNeasy column purification.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | UCLA Microarray Core
| Sample_hyb_protocol | UCLA Microarray Core
| Sample_scan_protocol | UCLA Microarray Core
| Sample_data_processing | MAS5
| Sample_platform_id | GPL339
| Sample_contact_name | Michael,Andrew,Balamotis
| Sample_contact_email | mbalamo@gmail.com
| Sample_contact_laboratory | Kohwi-Shigematsu
| Sample_contact_department | Life Sciences
| Sample_contact_institute | Lawrence Berkeley National Lab
| Sample_contact_address | 1 Cycotron Rd. Bld. 84
| Sample_contact_city | Berkeley
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94720
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM391nnn/GSM391371/suppl/GSM391371.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM391nnn/GSM391371/suppl/GSM391371.CHP.gz
| Sample_series_id | GSE15638
| Sample_data_row_count | 22690
| |
|
GSM391372 | GPL339 |
|
MEF Med23-/- (KO) cells serum starved 16 h Set 2
|
Mouse Med23 -/- embryonic fibroblasts (E11) passaged through crisis, cultured
|
strain: Med23-/- (KO)
|
N/A
|
Sample_geo_accession | GSM391372
| Sample_status | Public on Apr 14 2009
| Sample_submission_date | Apr 10 2009
| Sample_last_update_date | Apr 16 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | Starved 16 h in 0.5% FBS DMEM and then total RNA harvested (see below). Second replicate.
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol and Qiagen RNeasy column purification.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | UCLA Microarray Core
| Sample_hyb_protocol | UCLA Microarray Core
| Sample_scan_protocol | UCLA Microarray Core
| Sample_data_processing | MAS5
| Sample_platform_id | GPL339
| Sample_contact_name | Michael,Andrew,Balamotis
| Sample_contact_email | mbalamo@gmail.com
| Sample_contact_laboratory | Kohwi-Shigematsu
| Sample_contact_department | Life Sciences
| Sample_contact_institute | Lawrence Berkeley National Lab
| Sample_contact_address | 1 Cycotron Rd. Bld. 84
| Sample_contact_city | Berkeley
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94720
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM391nnn/GSM391372/suppl/GSM391372.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM391nnn/GSM391372/suppl/GSM391372.CHP.gz
| Sample_series_id | GSE15638
| Sample_data_row_count | 22690
| |
|
GSM391373 | GPL339 |
|
MEF wt cells 20% serum stimulated Set 1
|
Mouse embryonic fibroblasts (E11) passaged through crisis, cultured
|
strain: WT
|
N/A
|
Sample_geo_accession | GSM391373
| Sample_status | Public on Apr 14 2009
| Sample_submission_date | Apr 10 2009
| Sample_last_update_date | Apr 16 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | Starved 16 h in 0.5% FBS DMEM and then stimulated with 20% FBS for 30 minutes, then total RNA harvested (see below). First replicate.
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol and Qiagen column purification
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | UCLA Microarray Core
| Sample_hyb_protocol | UCLA Microarray Core
| Sample_scan_protocol | UCLA Microarray Core
| Sample_data_processing | MAS5
| Sample_platform_id | GPL339
| Sample_contact_name | Michael,Andrew,Balamotis
| Sample_contact_email | mbalamo@gmail.com
| Sample_contact_laboratory | Kohwi-Shigematsu
| Sample_contact_department | Life Sciences
| Sample_contact_institute | Lawrence Berkeley National Lab
| Sample_contact_address | 1 Cycotron Rd. Bld. 84
| Sample_contact_city | Berkeley
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94720
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM391nnn/GSM391373/suppl/GSM391373.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM391nnn/GSM391373/suppl/GSM391373.CHP.gz
| Sample_series_id | GSE15638
| Sample_data_row_count | 22690
| |
|
GSM391374 | GPL339 |
|
MEF wt cells 20% serum stimulated Set 2
|
Mouse embryonic fibroblasts (E11) passaged through crisis, cultured
|
strain: WT
|
N/A
|
Sample_geo_accession | GSM391374
| Sample_status | Public on Apr 14 2009
| Sample_submission_date | Apr 10 2009
| Sample_last_update_date | Apr 16 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | Starved 16 h in 0.5% FBS DMEM and then stimulated with 20% FBS for 30 minutes, then total RNA harvested (see below). Second replicate.
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol and Qiagen column purification
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | UCLA Microarray Core
| Sample_hyb_protocol | UCLA Microarray Core
| Sample_scan_protocol | UCLA Microarray Core
| Sample_data_processing | MAS5
| Sample_platform_id | GPL339
| Sample_contact_name | Michael,Andrew,Balamotis
| Sample_contact_email | mbalamo@gmail.com
| Sample_contact_laboratory | Kohwi-Shigematsu
| Sample_contact_department | Life Sciences
| Sample_contact_institute | Lawrence Berkeley National Lab
| Sample_contact_address | 1 Cycotron Rd. Bld. 84
| Sample_contact_city | Berkeley
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94720
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM391nnn/GSM391374/suppl/GSM391374.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM391nnn/GSM391374/suppl/GSM391374.CHP.gz
| Sample_series_id | GSE15638
| Sample_data_row_count | 22690
| |
|
GSM391379 | GPL339 |
|
MEF Med23-/- (KO) cells 20% serum stimulated Set 1
|
Mouse Med23 -/- embryonic fibroblasts (E11) passaged through crisis, cultured
|
strain: Med23-/- (KO)
|
N/A
|
Sample_geo_accession | GSM391379
| Sample_status | Public on Apr 14 2009
| Sample_submission_date | Apr 10 2009
| Sample_last_update_date | Apr 16 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | Starved 16 h in 0.5% FBS DMEM and then stimulated with 20% FBS for 30 minutes, then total RNA harvested (see below). First replicate.
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol and Qiagen column purification
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | UCLA Microarray Core
| Sample_hyb_protocol | UCLA Microarray Core
| Sample_scan_protocol | UCLA Microarray Core
| Sample_data_processing | MAS5
| Sample_platform_id | GPL339
| Sample_contact_name | Michael,Andrew,Balamotis
| Sample_contact_email | mbalamo@gmail.com
| Sample_contact_laboratory | Kohwi-Shigematsu
| Sample_contact_department | Life Sciences
| Sample_contact_institute | Lawrence Berkeley National Lab
| Sample_contact_address | 1 Cycotron Rd. Bld. 84
| Sample_contact_city | Berkeley
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94720
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM391nnn/GSM391379/suppl/GSM391379.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM391nnn/GSM391379/suppl/GSM391379.CHP.gz
| Sample_series_id | GSE15638
| Sample_data_row_count | 22690
| |
|
GSM391382 | GPL339 |
|
MEF Med23-/- (KO) cells 20% serum stimulated Set 2
|
Mouse Med23 -/- embryonic fibroblasts (E11) passaged through crisis, cultured
|
strain: Med23-/- (KO)
|
N/A
|
Sample_geo_accession | GSM391382
| Sample_status | Public on Apr 14 2009
| Sample_submission_date | Apr 10 2009
| Sample_last_update_date | Apr 16 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Mus musculus
| Sample_taxid_ch1 | 10090
| Sample_treatment_protocol_ch1 | Starved 16 h in 0.5% FBS DMEM and then stimulated with 20% FBS for 30 minutes, then total RNA harvested (see below). Second replicate.
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Trizol and Qiagen column purification
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | UCLA Microarray Core
| Sample_hyb_protocol | UCLA Microarray Core
| Sample_scan_protocol | UCLA Microarray Core
| Sample_data_processing | MAS5
| Sample_platform_id | GPL339
| Sample_contact_name | Michael,Andrew,Balamotis
| Sample_contact_email | mbalamo@gmail.com
| Sample_contact_laboratory | Kohwi-Shigematsu
| Sample_contact_department | Life Sciences
| Sample_contact_institute | Lawrence Berkeley National Lab
| Sample_contact_address | 1 Cycotron Rd. Bld. 84
| Sample_contact_city | Berkeley
| Sample_contact_state | CA
| Sample_contact_zip/postal_code | 94720
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM391nnn/GSM391382/suppl/GSM391382.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM391nnn/GSM391382/suppl/GSM391382.CHP.gz
| Sample_series_id | GSE15638
| Sample_data_row_count | 22690
| |
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