Search results for the GEO ID: GSE15724  |
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(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM393545 | GPL1261 |
|
Neg1
|
lectin-,GFP- #1
|
tissue: tracheal epithelium
strain: KRT5-GFP transgenic
cell line: KRT5-GFP-, lectin- columnar epithelium
|
1096_50098_M430-2_13909_NEG1.CEL
|
| Sample_geo_accession | GSM393545
| | Sample_status | Public on Jul 02 2009
| | Sample_submission_date | Apr 17 2009
| | Sample_last_update_date | Jul 02 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | FACS based on GFP and binding of GSI-A3B isolectin yielded three populations of tracheal epithelium.
| | Sample_growth_protocol_ch1 | Enzymatic digestion and manual dissection were used to obtain a single cell suspension from KRT5-GFP hemizygous mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | QIAGEN RNEasy micro kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Nugen
| | Sample_hyb_protocol | Standard Affymetrix protocol
| | Sample_scan_protocol | GCOS
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jason,R,Rock
| | Sample_contact_email | j.rock@cellbio.duke.edu
| | Sample_contact_phone | (919) 684-5009
| | Sample_contact_fax | (919) 681-3523
| | Sample_contact_laboratory | Brigid Hogan
| | Sample_contact_department | Cell Biology
| | Sample_contact_institute | Duke University Medical Center
| | Sample_contact_address | 353 Nanaline Duke, Research Drive
| | Sample_contact_city | Durham
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 27705
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM393nnn/GSM393545/suppl/GSM393545.CEL.gz
| | Sample_series_id | GSE15724
| | Sample_data_row_count | 45101
| | |
|
GSM393546 | GPL1261 |
|
Neg2
|
lectin-,GFP- #2
|
tissue: tracheal epithelium
strain: KRT5-GFP transgenic
cell line: KRT5-GFP-, lectin- columnar epithelium
|
1096_50101_M430-2_13912_NEG2.CEL
|
| Sample_geo_accession | GSM393546
| | Sample_status | Public on Jul 02 2009
| | Sample_submission_date | Apr 17 2009
| | Sample_last_update_date | Jul 02 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | FACS based on GFP and binding of GSI-A3B isolectin yielded three populations of tracheal epithelium.
| | Sample_growth_protocol_ch1 | Enzymatic digestion and manual dissection were used to obtain a single cell suspension from KRT5-GFP hemizygous mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | QIAGEN RNEasy micro kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Nugen
| | Sample_hyb_protocol | Standard Affymetrix protocol
| | Sample_scan_protocol | GCOS
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jason,R,Rock
| | Sample_contact_email | j.rock@cellbio.duke.edu
| | Sample_contact_phone | (919) 684-5009
| | Sample_contact_fax | (919) 681-3523
| | Sample_contact_laboratory | Brigid Hogan
| | Sample_contact_department | Cell Biology
| | Sample_contact_institute | Duke University Medical Center
| | Sample_contact_address | 353 Nanaline Duke, Research Drive
| | Sample_contact_city | Durham
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 27705
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM393nnn/GSM393546/suppl/GSM393546.CEL.gz
| | Sample_series_id | GSE15724
| | Sample_data_row_count | 45101
| | |
|
GSM393547 | GPL1261 |
|
Neg3
|
lectin-,GFP- #3
|
tissue: tracheal epithelium
strain: KRT5-GFP transgenic
cell line: KRT5-GFP-, lectin- columnar epithelium
|
1096_50104_M430-2_13915_NEG3@N2.CEL
|
| Sample_geo_accession | GSM393547
| | Sample_status | Public on Jul 02 2009
| | Sample_submission_date | Apr 17 2009
| | Sample_last_update_date | Jul 02 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | FACS based on GFP and binding of GSI-A3B isolectin yielded three populations of tracheal epithelium.
| | Sample_growth_protocol_ch1 | Enzymatic digestion and manual dissection were used to obtain a single cell suspension from KRT5-GFP hemizygous mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | QIAGEN RNEasy micro kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Nugen
| | Sample_hyb_protocol | Standard Affymetrix protocol
| | Sample_scan_protocol | GCOS
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jason,R,Rock
| | Sample_contact_email | j.rock@cellbio.duke.edu
| | Sample_contact_phone | (919) 684-5009
| | Sample_contact_fax | (919) 681-3523
| | Sample_contact_laboratory | Brigid Hogan
| | Sample_contact_department | Cell Biology
| | Sample_contact_institute | Duke University Medical Center
| | Sample_contact_address | 353 Nanaline Duke, Research Drive
| | Sample_contact_city | Durham
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 27705
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM393nnn/GSM393547/suppl/GSM393547.CEL.gz
| | Sample_series_id | GSE15724
| | Sample_data_row_count | 45101
| | |
|
GSM393548 | GPL1261 |
|
Lec1
|
lectin+, GFP- #1
|
tissue: tracheal epithelium
strain: KRT5-GFP transgenic
cell line: KRT5-GFP-, lectin+ BCs
|
1096_50097_M430-2_13908_LEC+1_2.CEL
|
| Sample_geo_accession | GSM393548
| | Sample_status | Public on Jul 02 2009
| | Sample_submission_date | Apr 17 2009
| | Sample_last_update_date | Jul 02 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | FACS based on GFP and binding of GSI-A3B isolectin yielded three populations of tracheal epithelium.
| | Sample_growth_protocol_ch1 | Enzymatic digestion and manual dissection were used to obtain a single cell suspension from KRT5-GFP hemizygous mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | QIAGEN RNEasy micro kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Nugen
| | Sample_hyb_protocol | Standard Affymetrix protocol
| | Sample_scan_protocol | GCOS
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jason,R,Rock
| | Sample_contact_email | j.rock@cellbio.duke.edu
| | Sample_contact_phone | (919) 684-5009
| | Sample_contact_fax | (919) 681-3523
| | Sample_contact_laboratory | Brigid Hogan
| | Sample_contact_department | Cell Biology
| | Sample_contact_institute | Duke University Medical Center
| | Sample_contact_address | 353 Nanaline Duke, Research Drive
| | Sample_contact_city | Durham
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 27705
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM393nnn/GSM393548/suppl/GSM393548.CEL.gz
| | Sample_series_id | GSE15724
| | Sample_data_row_count | 45101
| | |
|
GSM393549 | GPL1261 |
|
Lec2
|
lectin+, GFP- #2
|
tissue: tracheal epithelium
strain: KRT5-GFP transgenic
cell line: KRT5-GFP-, lectin+ BCs
|
1096_50100_M430-2_13911_LEC+2.CEL
|
| Sample_geo_accession | GSM393549
| | Sample_status | Public on Jul 02 2009
| | Sample_submission_date | Apr 17 2009
| | Sample_last_update_date | Jul 02 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | FACS based on GFP and binding of GSI-A3B isolectin yielded three populations of tracheal epithelium.
| | Sample_growth_protocol_ch1 | Enzymatic digestion and manual dissection were used to obtain a single cell suspension from KRT5-GFP hemizygous mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | QIAGEN RNEasy micro kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Nugen
| | Sample_hyb_protocol | Standard Affymetrix protocol
| | Sample_scan_protocol | GCOS
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jason,R,Rock
| | Sample_contact_email | j.rock@cellbio.duke.edu
| | Sample_contact_phone | (919) 684-5009
| | Sample_contact_fax | (919) 681-3523
| | Sample_contact_laboratory | Brigid Hogan
| | Sample_contact_department | Cell Biology
| | Sample_contact_institute | Duke University Medical Center
| | Sample_contact_address | 353 Nanaline Duke, Research Drive
| | Sample_contact_city | Durham
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 27705
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM393nnn/GSM393549/suppl/GSM393549.CEL.gz
| | Sample_series_id | GSE15724
| | Sample_data_row_count | 45101
| | |
|
GSM393550 | GPL1261 |
|
Lec3
|
lectin+, GFP- #3
|
tissue: tracheal epithelium
strain: KRT5-GFP transgenic
cell line: KRT5-GFP-, lectin+ BCs
|
1096_50103_M430-2_13914_LEC+3.CEL
|
| Sample_geo_accession | GSM393550
| | Sample_status | Public on Jul 02 2009
| | Sample_submission_date | Apr 17 2009
| | Sample_last_update_date | Jul 02 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | FACS based on GFP and binding of GSI-A3B isolectin yielded three populations of tracheal epithelium.
| | Sample_growth_protocol_ch1 | Enzymatic digestion and manual dissection were used to obtain a single cell suspension from KRT5-GFP hemizygous mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | QIAGEN RNEasy micro kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Nugen
| | Sample_hyb_protocol | Standard Affymetrix protocol
| | Sample_scan_protocol | GCOS
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jason,R,Rock
| | Sample_contact_email | j.rock@cellbio.duke.edu
| | Sample_contact_phone | (919) 684-5009
| | Sample_contact_fax | (919) 681-3523
| | Sample_contact_laboratory | Brigid Hogan
| | Sample_contact_department | Cell Biology
| | Sample_contact_institute | Duke University Medical Center
| | Sample_contact_address | 353 Nanaline Duke, Research Drive
| | Sample_contact_city | Durham
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 27705
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM393nnn/GSM393550/suppl/GSM393550.CEL.gz
| | Sample_series_id | GSE15724
| | Sample_data_row_count | 45101
| | |
|
GSM393551 | GPL1261 |
|
Gfp1
|
lectin+, GFP+ #1
|
tissue: tracheal epithelium
strain: KRT5-GFP transgenic
cell line: KRT5-GFP+, lectin+ BCs
|
1096_50096_M430-2_13907_GFP+LEC+1.CEL
|
| Sample_geo_accession | GSM393551
| | Sample_status | Public on Jul 02 2009
| | Sample_submission_date | Apr 17 2009
| | Sample_last_update_date | Jul 02 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | FACS based on GFP and binding of GSI-A3B isolectin yielded three populations of tracheal epithelium.
| | Sample_growth_protocol_ch1 | Enzymatic digestion and manual dissection were used to obtain a single cell suspension from KRT5-GFP hemizygous mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | QIAGEN RNEasy micro kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Nugen
| | Sample_hyb_protocol | Standard Affymetrix protocol
| | Sample_scan_protocol | GCOS
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jason,R,Rock
| | Sample_contact_email | j.rock@cellbio.duke.edu
| | Sample_contact_phone | (919) 684-5009
| | Sample_contact_fax | (919) 681-3523
| | Sample_contact_laboratory | Brigid Hogan
| | Sample_contact_department | Cell Biology
| | Sample_contact_institute | Duke University Medical Center
| | Sample_contact_address | 353 Nanaline Duke, Research Drive
| | Sample_contact_city | Durham
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 27705
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM393nnn/GSM393551/suppl/GSM393551.CEL.gz
| | Sample_series_id | GSE15724
| | Sample_data_row_count | 45101
| | |
|
GSM393552 | GPL1261 |
|
Gfp2
|
lectin+, GFP+ #2
|
tissue: tracheal epithelium
strain: KRT5-GFP transgenic
cell line: KRT5-GFP+, lectin+ BCs
|
1096_50099_M430-2_13910_GFP+LEC+2.CEL
|
| Sample_geo_accession | GSM393552
| | Sample_status | Public on Jul 02 2009
| | Sample_submission_date | Apr 17 2009
| | Sample_last_update_date | Jul 02 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | FACS based on GFP and binding of GSI-A3B isolectin yielded three populations of tracheal epithelium.
| | Sample_growth_protocol_ch1 | Enzymatic digestion and manual dissection were used to obtain a single cell suspension from KRT5-GFP hemizygous mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | QIAGEN RNEasy micro kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Nugen
| | Sample_hyb_protocol | Standard Affymetrix protocol
| | Sample_scan_protocol | GCOS
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jason,R,Rock
| | Sample_contact_email | j.rock@cellbio.duke.edu
| | Sample_contact_phone | (919) 684-5009
| | Sample_contact_fax | (919) 681-3523
| | Sample_contact_laboratory | Brigid Hogan
| | Sample_contact_department | Cell Biology
| | Sample_contact_institute | Duke University Medical Center
| | Sample_contact_address | 353 Nanaline Duke, Research Drive
| | Sample_contact_city | Durham
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 27705
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM393nnn/GSM393552/suppl/GSM393552.CEL.gz
| | Sample_series_id | GSE15724
| | Sample_data_row_count | 45101
| | |
|
GSM393553 | GPL1261 |
|
Gfp3
|
lectin+, GFP+ #3
|
tissue: tracheal epithelium
strain: KRT5-GFP transgenic
cell line: KRT5-GFP+, lectin+ BCs
|
1096_50102_M430-2_13913_GFP+LEC+3_2.CEL
|
| Sample_geo_accession | GSM393553
| | Sample_status | Public on Jul 02 2009
| | Sample_submission_date | Apr 17 2009
| | Sample_last_update_date | Jul 02 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | FACS based on GFP and binding of GSI-A3B isolectin yielded three populations of tracheal epithelium.
| | Sample_growth_protocol_ch1 | Enzymatic digestion and manual dissection were used to obtain a single cell suspension from KRT5-GFP hemizygous mice.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | QIAGEN RNEasy micro kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Nugen
| | Sample_hyb_protocol | Standard Affymetrix protocol
| | Sample_scan_protocol | GCOS
| | Sample_data_processing | RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Jason,R,Rock
| | Sample_contact_email | j.rock@cellbio.duke.edu
| | Sample_contact_phone | (919) 684-5009
| | Sample_contact_fax | (919) 681-3523
| | Sample_contact_laboratory | Brigid Hogan
| | Sample_contact_department | Cell Biology
| | Sample_contact_institute | Duke University Medical Center
| | Sample_contact_address | 353 Nanaline Duke, Research Drive
| | Sample_contact_city | Durham
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 27705
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM393nnn/GSM393553/suppl/GSM393553.CEL.gz
| | Sample_series_id | GSE15724
| | Sample_data_row_count | 45101
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