Search results for the GEO ID: GSE16080 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM402520 | GPL570 |
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MDA-MB-468 parental cells replicate 1
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MDA-MB-468 parental cells
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cell line: MDA-MB-468
cell type: breast cancer
methotrexate sensitivity: sensitive
|
Gene expression profile of MDA-MB-468 cells sensitive to methotrexate.
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Sample_geo_accession | GSM402520
| Sample_status | Public on Sep 08 2009
| Sample_submission_date | May 13 2009
| Sample_last_update_date | Jun 18 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit from Qiagen
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix protocol for HG U133 PLUS 2.0
| Sample_hyb_protocol | Affymetrix protocol for HG U133 PLUS 2.0
| Sample_scan_protocol | Affymetrix protocol for HG U133 PLUS 2.0
| Sample_data_processing | Value generated using MAS 5.0 non-scaled
| Sample_platform_id | GPL570
| Sample_contact_name | carlos,j,ciudad
| Sample_contact_email | cciudad@ub.edu
| Sample_contact_phone | +34-93-403-4455
| Sample_contact_fax | +34-93-402-4520
| Sample_contact_laboratory | school of pharmacy
| Sample_contact_department | biochemistry and molecular biology
| Sample_contact_institute | university of barcelona
| Sample_contact_address | av. diagonal 643
| Sample_contact_city | barcelona
| Sample_contact_state | barcelona
| Sample_contact_zip/postal_code | 08028
| Sample_contact_country | Spain
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM402nnn/GSM402520/suppl/GSM402520.CEL.gz
| Sample_series_id | GSE16080
| Sample_series_id | GSE16648
| Sample_data_row_count | 54675
| |
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GSM402522 | GPL570 |
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MDA-MB-468 parental cells replicate 2
|
MDA-MB-468 parental cells
|
cell line: MDA-MB-468
cell type: breast cancer
methotrexate sensitivity: sensitive
|
Gene expression profile of MDA-MB-468 cells sensitive to methotrexate.
|
Sample_geo_accession | GSM402522
| Sample_status | Public on Sep 08 2009
| Sample_submission_date | May 13 2009
| Sample_last_update_date | Jun 18 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit from Qiagen
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix protocol for HG U133 PLUS 2.0
| Sample_hyb_protocol | Affymetrix protocol for HG U133 PLUS 2.0
| Sample_scan_protocol | Affymetrix protocol for HG U133 PLUS 2.0
| Sample_data_processing | Value generated using MAS 5.0 non-scaled
| Sample_platform_id | GPL570
| Sample_contact_name | carlos,j,ciudad
| Sample_contact_email | cciudad@ub.edu
| Sample_contact_phone | +34-93-403-4455
| Sample_contact_fax | +34-93-402-4520
| Sample_contact_laboratory | school of pharmacy
| Sample_contact_department | biochemistry and molecular biology
| Sample_contact_institute | university of barcelona
| Sample_contact_address | av. diagonal 643
| Sample_contact_city | barcelona
| Sample_contact_state | barcelona
| Sample_contact_zip/postal_code | 08028
| Sample_contact_country | Spain
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM402nnn/GSM402522/suppl/GSM402522.CEL.gz
| Sample_series_id | GSE16080
| Sample_series_id | GSE16648
| Sample_data_row_count | 54675
| |
|
GSM402524 | GPL570 |
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MDA-MB-468 parental cells replicate 3
|
MDA-MB-468 parental cells
|
cell line: MDA-MB-468
cell type: breast cancer
methotrexate sensitivity: sensitive
|
Gene expression profile of MDA-MB-468 cells sensitive to methotrexate.
|
Sample_geo_accession | GSM402524
| Sample_status | Public on Sep 08 2009
| Sample_submission_date | May 13 2009
| Sample_last_update_date | Jun 18 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit from Qiagen
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix protocol for HG U133 PLUS 2.0
| Sample_hyb_protocol | Affymetrix protocol for HG U133 PLUS 2.0
| Sample_scan_protocol | Affymetrix protocol for HG U133 PLUS 2.0
| Sample_data_processing | Value generated using MAS 5.0 non-scaled
| Sample_platform_id | GPL570
| Sample_contact_name | carlos,j,ciudad
| Sample_contact_email | cciudad@ub.edu
| Sample_contact_phone | +34-93-403-4455
| Sample_contact_fax | +34-93-402-4520
| Sample_contact_laboratory | school of pharmacy
| Sample_contact_department | biochemistry and molecular biology
| Sample_contact_institute | university of barcelona
| Sample_contact_address | av. diagonal 643
| Sample_contact_city | barcelona
| Sample_contact_state | barcelona
| Sample_contact_zip/postal_code | 08028
| Sample_contact_country | Spain
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM402nnn/GSM402524/suppl/GSM402524.CEL.gz
| Sample_series_id | GSE16080
| Sample_series_id | GSE16648
| Sample_data_row_count | 54675
| |
|
GSM402526 | GPL570 |
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MDA-MB-468 resistant cells replicate 1
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MDA-MB-468 methotrexate-resistant cells
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cell line: MDA-MB-468
cell type: breast cancer
methotrexate sensitivity: resistant
|
Gene expression profile of MDA-MB-468 cells resistant to 10e-6M methotrexate.
|
Sample_geo_accession | GSM402526
| Sample_status | Public on Sep 08 2009
| Sample_submission_date | May 13 2009
| Sample_last_update_date | Jun 18 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit from Qiagen
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix protocol for HG U133 PLUS 2.0
| Sample_hyb_protocol | Affymetrix protocol for HG U133 PLUS 2.0
| Sample_scan_protocol | Affymetrix protocol for HG U133 PLUS 2.0
| Sample_data_processing | Value generated using MAS 5.0 non-scaled
| Sample_platform_id | GPL570
| Sample_contact_name | carlos,j,ciudad
| Sample_contact_email | cciudad@ub.edu
| Sample_contact_phone | +34-93-403-4455
| Sample_contact_fax | +34-93-402-4520
| Sample_contact_laboratory | school of pharmacy
| Sample_contact_department | biochemistry and molecular biology
| Sample_contact_institute | university of barcelona
| Sample_contact_address | av. diagonal 643
| Sample_contact_city | barcelona
| Sample_contact_state | barcelona
| Sample_contact_zip/postal_code | 08028
| Sample_contact_country | Spain
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM402nnn/GSM402526/suppl/GSM402526.CEL.gz
| Sample_series_id | GSE16080
| Sample_series_id | GSE16648
| Sample_data_row_count | 54675
| |
|
GSM402527 | GPL570 |
|
MDA-MB-468 resistant cells replicate 2
|
MDA-MB-468 methotrexate-resistant cells
|
cell line: MDA-MB-468
cell type: breast cancer
methotrexate sensitivity: resistant
|
Gene expression profile of MDA-MB-468 cells resistant to 10e-6M methotrexate.
|
Sample_geo_accession | GSM402527
| Sample_status | Public on Sep 08 2009
| Sample_submission_date | May 13 2009
| Sample_last_update_date | Jun 18 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit from Qiagen
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix protocol for HG U133 PLUS 2.0
| Sample_hyb_protocol | Affymetrix protocol for HG U133 PLUS 2.0
| Sample_scan_protocol | Affymetrix protocol for HG U133 PLUS 2.0
| Sample_data_processing | Value generated using MAS 5.0 non-scaled
| Sample_platform_id | GPL570
| Sample_contact_name | carlos,j,ciudad
| Sample_contact_email | cciudad@ub.edu
| Sample_contact_phone | +34-93-403-4455
| Sample_contact_fax | +34-93-402-4520
| Sample_contact_laboratory | school of pharmacy
| Sample_contact_department | biochemistry and molecular biology
| Sample_contact_institute | university of barcelona
| Sample_contact_address | av. diagonal 643
| Sample_contact_city | barcelona
| Sample_contact_state | barcelona
| Sample_contact_zip/postal_code | 08028
| Sample_contact_country | Spain
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM402nnn/GSM402527/suppl/GSM402527.CEL.gz
| Sample_series_id | GSE16080
| Sample_series_id | GSE16648
| Sample_data_row_count | 54675
| |
|
GSM402528 | GPL570 |
|
MDA-MB-468 resistant cells replicate 3
|
MDA-MB-468 methotrexate-resistant cells
|
cell line: MDA-MB-468
cell type: breast cancer
methotrexate sensitivity: resistant
|
Gene expression profile of MDA-MB-468 cells resistant to 10e-6M methotrexate.
|
Sample_geo_accession | GSM402528
| Sample_status | Public on Sep 08 2009
| Sample_submission_date | May 13 2009
| Sample_last_update_date | Jun 18 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNeasy Mini Kit from Qiagen
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Affymetrix protocol for HG U133 PLUS 2.0
| Sample_hyb_protocol | Affymetrix protocol for HG U133 PLUS 2.0
| Sample_scan_protocol | Affymetrix protocol for HG U133 PLUS 2.0
| Sample_data_processing | Value generated using MAS 5.0 non-scaled
| Sample_platform_id | GPL570
| Sample_contact_name | carlos,j,ciudad
| Sample_contact_email | cciudad@ub.edu
| Sample_contact_phone | +34-93-403-4455
| Sample_contact_fax | +34-93-402-4520
| Sample_contact_laboratory | school of pharmacy
| Sample_contact_department | biochemistry and molecular biology
| Sample_contact_institute | university of barcelona
| Sample_contact_address | av. diagonal 643
| Sample_contact_city | barcelona
| Sample_contact_state | barcelona
| Sample_contact_zip/postal_code | 08028
| Sample_contact_country | Spain
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM402nnn/GSM402528/suppl/GSM402528.CEL.gz
| Sample_series_id | GSE16080
| Sample_series_id | GSE16648
| Sample_data_row_count | 54675
| |
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