Search results for the GEO ID: GSE16263  |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM409423 | GPL1261 |
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mouse-MEF-PTIP -/-, replicate1
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immortalized mouse embryonic fibroblast
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cell line: MEF
genotype: PTIP -/-
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Gene expression data from Cre-expressing PTIP flox/flox MEF
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| Sample_geo_accession | GSM409423
| | Sample_status | Public on May 29 2009
| | Sample_submission_date | May 28 2009
| | Sample_last_update_date | May 29 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | All cells were routinely cultured in DMEM plus 10% FBS (Hyclone). For selection, count cells and plate 5x105/10cm, add 2.5ug/ml puromycin for 2~3days. Repeat the selection one more time.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA followed by Qiagen RNeasy mini kit purification was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | standard Affymetrix label protocol
| | Sample_hyb_protocol | standard Affymetrix hyb protocol
| | Sample_scan_protocol | standard Affymetrix scan protocol
| | Sample_data_processing | data processing/normalization was performed using the RMA algorithm
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Young-Wook,,Cho
| | Sample_contact_department | CEB
| | Sample_contact_institute | NIDDK
| | Sample_contact_address | 9000 Rockville Pike
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM409nnn/GSM409423/suppl/GSM409423.CEL.gz
| | Sample_series_id | GSE16263
| | Sample_data_row_count | 45101
| | |
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GSM409424 | GPL1261 |
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mouse-MEF-PTIP -/-, replicate2
|
immortalized mouse embryonic fibroblast
|
cell line: MEF
genotype: PTIP -/-
|
Gene expression data from MEF PTIP -/- cell
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| Sample_geo_accession | GSM409424
| | Sample_status | Public on May 29 2009
| | Sample_submission_date | May 28 2009
| | Sample_last_update_date | May 29 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | All cells were routinely cultured in DMEM plus 10% FBS (Hyclone). For selection, count cells and plate 5x105/10cm, add 2.5ug/ml puromycin for 2~3days. Repeat the selection one more time.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA followed by Qiagen RNeasy mini kit purification was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | standard Affymetrix label protocol
| | Sample_hyb_protocol | standard Affymetrix hyb protocol
| | Sample_scan_protocol | standard Affymetrix scan protocol
| | Sample_data_processing | data processing/normalization was performed using the RMA algorithm
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Young-Wook,,Cho
| | Sample_contact_department | CEB
| | Sample_contact_institute | NIDDK
| | Sample_contact_address | 9000 Rockville Pike
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM409nnn/GSM409424/suppl/GSM409424.CEL.gz
| | Sample_series_id | GSE16263
| | Sample_data_row_count | 45101
| | |
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GSM409425 | GPL1261 |
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mouse-MEF-PTIP +/+, replicate1
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immortalized mouse embryonic fibroblast
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cell line: MEF
genotype: PTIP +/+
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Gene expression data from MEF PTIP +/+ cell
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| Sample_geo_accession | GSM409425
| | Sample_status | Public on May 29 2009
| | Sample_submission_date | May 28 2009
| | Sample_last_update_date | May 29 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | All cells were routinely cultured in DMEM plus 10% FBS (Hyclone). For selection, count cells and plate 5x105/10cm, add 2.5ug/ml puromycin for 2~3days. Repeat the selection one more time.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA followed by Qiagen RNeasy mini kit purification was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | standard Affymetrix label protocol
| | Sample_hyb_protocol | standard Affymetrix hyb protocol
| | Sample_scan_protocol | standard Affymetrix scan protocol
| | Sample_data_processing | data processing/normalization was performed using the RMA algorithm
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Young-Wook,,Cho
| | Sample_contact_department | CEB
| | Sample_contact_institute | NIDDK
| | Sample_contact_address | 9000 Rockville Pike
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM409nnn/GSM409425/suppl/GSM409425.CEL.gz
| | Sample_series_id | GSE16263
| | Sample_data_row_count | 45101
| | |
|
GSM409426 | GPL1261 |
|
mouse-MEF-PTIP +/+, replicate2
|
immortalized mouse embryonic fibroblast
|
cell line: MEF
genotype: PTIP +/+
|
Gene expression data from MEF PTIP +/+ cell
|
| Sample_geo_accession | GSM409426
| | Sample_status | Public on May 29 2009
| | Sample_submission_date | May 28 2009
| | Sample_last_update_date | May 29 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_growth_protocol_ch1 | All cells were routinely cultured in DMEM plus 10% FBS (Hyclone). For selection, count cells and plate 5x105/10cm, add 2.5ug/ml puromycin for 2~3days. Repeat the selection one more time.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA followed by Qiagen RNeasy mini kit purification was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | standard Affymetrix label protocol
| | Sample_hyb_protocol | standard Affymetrix hyb protocol
| | Sample_scan_protocol | standard Affymetrix scan protocol
| | Sample_data_processing | data processing/normalization was performed using the RMA algorithm
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Young-Wook,,Cho
| | Sample_contact_department | CEB
| | Sample_contact_institute | NIDDK
| | Sample_contact_address | 9000 Rockville Pike
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20892
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM409nnn/GSM409426/suppl/GSM409426.CEL.gz
| | Sample_series_id | GSE16263
| | Sample_data_row_count | 45101
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