Search results for the GEO ID: GSE16386  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM411223 | GPL570 |
|
1 IL-4 macrophage rep 1, 6h
|
Macrophages treated with interleukin-4 and vehicle for 6h
|
donor: 1
tissue: macrophage
activation: IL-4
treatment: Control
time: 6h
|
Gene expression data from macrophages treated with interleukin-4 and vehicle for 6h
|
| Sample_geo_accession | GSM411223
| | Sample_status | Public on Nov 18 2010
| | Sample_submission_date | Jun 02 2009
| | Sample_last_update_date | Nov 18 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell were treated after plating into 6-well cell culture plates with 100 ug/ml IL-4. Simultaneously, vehicle (DMSO:ethanol) or 1 uM Rosiglitazone was added.
| | Sample_growth_protocol_ch1 | Isolated monocytes were cultured in RPMI+10% FCS supplemented with glutamine, penicillin and streptomycin.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized on Human Genome U133 Plus 2 Affymetrix Array according to Affymetric standardized protocol.
| | Sample_scan_protocol | Microarray were scanned canned according to Affymetric standardized protocol.
| | Sample_data_processing | The data were generated with GCOS, and cel files were analyzed in GeneSpring 7.3 using GC-RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Attila,,Szanto
| | Sample_contact_email | attila.szanto@gmail.com
| | Sample_contact_phone | 617 726-5966
| | Sample_contact_fax | 617 726-6893
| | Sample_contact_laboratory | Currently at Massachusetts General Hospital/Molecular Biology
| | Sample_contact_department | Biochemistry and Molecular Biology
| | Sample_contact_institute | University of Debrecen
| | Sample_contact_address | 1 Egyetem ter
| | Sample_contact_city | Debrecen
| | Sample_contact_zip/postal_code | 4032
| | Sample_contact_country | Hungary
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM411nnn/GSM411223/suppl/GSM411223.CEL.gz
| | Sample_series_id | GSE16386
| | Sample_series_id | GSE16387
| | Sample_data_row_count | 54675
| | |
|
GSM411224 | GPL570 |
|
1 IL-4 macrophage rep 2, 6h
|
Macrophages treated with interleukin-4 and vehicle for 6h
|
donor: 1
tissue: macrophage
activation: IL-4
treatment: Control
time: 6h
|
Gene expression data from macrophages treated with interleukin-4 and vehicle for 6h
|
| Sample_geo_accession | GSM411224
| | Sample_status | Public on Nov 18 2010
| | Sample_submission_date | Jun 02 2009
| | Sample_last_update_date | Nov 18 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell were treated after plating into 6-well cell culture plates with 100 ug/ml IL-4. Simultaneously, vehicle (DMSO:ethanol) or 1 uM Rosiglitazone was added.
| | Sample_growth_protocol_ch1 | Isolated monocytes were cultured in RPMI+10% FCS supplemented with glutamine, penicillin and streptomycin.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized on Human Genome U133 Plus 2 Affymetrix Array according to Affymetric standardized protocol.
| | Sample_scan_protocol | Microarray were scanned canned according to Affymetric standardized protocol.
| | Sample_data_processing | The data were generated with GCOS, and cel files were analyzed in GeneSpring 7.3 using GC-RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Attila,,Szanto
| | Sample_contact_email | attila.szanto@gmail.com
| | Sample_contact_phone | 617 726-5966
| | Sample_contact_fax | 617 726-6893
| | Sample_contact_laboratory | Currently at Massachusetts General Hospital/Molecular Biology
| | Sample_contact_department | Biochemistry and Molecular Biology
| | Sample_contact_institute | University of Debrecen
| | Sample_contact_address | 1 Egyetem ter
| | Sample_contact_city | Debrecen
| | Sample_contact_zip/postal_code | 4032
| | Sample_contact_country | Hungary
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM411nnn/GSM411224/suppl/GSM411224.CEL.gz
| | Sample_series_id | GSE16386
| | Sample_series_id | GSE16387
| | Sample_data_row_count | 54675
| | |
|
GSM411225 | GPL570 |
|
1 IL-4 macrophage+Rosigl. rep 1, 6h
|
Macrophages treated with interleukin-4 and Rosiglitazone for 6h
|
donor: 1
tissue: macrophage
activation: IL-4
treatment: Rosiglitazone
time: 6h
|
Gene expression data from macrophages treated with interleukin-4 and Rosiglitazone for 6h
|
| Sample_geo_accession | GSM411225
| | Sample_status | Public on Nov 18 2010
| | Sample_submission_date | Jun 02 2009
| | Sample_last_update_date | Nov 18 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell were treated after plating into 6-well cell culture plates with 100 ug/ml IL-4. Simultaneously, vehicle (DMSO:ethanol) or 1 uM Rosiglitazone was added.
| | Sample_growth_protocol_ch1 | Isolated monocytes were cultured in RPMI+10% FCS supplemented with glutamine, penicillin and streptomycin.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized on Human Genome U133 Plus 2 Affymetrix Array according to Affymetric standardized protocol.
| | Sample_scan_protocol | Microarray were scanned canned according to Affymetric standardized protocol.
| | Sample_data_processing | The data were generated with GCOS, and cel files were analyzed in GeneSpring 7.3 using GC-RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Attila,,Szanto
| | Sample_contact_email | attila.szanto@gmail.com
| | Sample_contact_phone | 617 726-5966
| | Sample_contact_fax | 617 726-6893
| | Sample_contact_laboratory | Currently at Massachusetts General Hospital/Molecular Biology
| | Sample_contact_department | Biochemistry and Molecular Biology
| | Sample_contact_institute | University of Debrecen
| | Sample_contact_address | 1 Egyetem ter
| | Sample_contact_city | Debrecen
| | Sample_contact_zip/postal_code | 4032
| | Sample_contact_country | Hungary
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM411nnn/GSM411225/suppl/GSM411225.CEL.gz
| | Sample_series_id | GSE16386
| | Sample_series_id | GSE16387
| | Sample_data_row_count | 54675
| | |
|
GSM411226 | GPL570 |
|
1 IL-4 macrophage+Rosigl. rep 2, 6h
|
Macrophages treated with interleukin-4 and Rosiglitazone for 6h
|
donor: 1
tissue: macrophage
activation: IL-4
treatment: Rosiglitazone
time: 6h
|
Gene expression data from macrophages treated with interleukin-4 and Rosiglitazone for 6h
|
| Sample_geo_accession | GSM411226
| | Sample_status | Public on Nov 18 2010
| | Sample_submission_date | Jun 02 2009
| | Sample_last_update_date | Nov 18 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell were treated after plating into 6-well cell culture plates with 100 ug/ml IL-4. Simultaneously, vehicle (DMSO:ethanol) or 1 uM Rosiglitazone was added.
| | Sample_growth_protocol_ch1 | Isolated monocytes were cultured in RPMI+10% FCS supplemented with glutamine, penicillin and streptomycin.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized on Human Genome U133 Plus 2 Affymetrix Array according to Affymetric standardized protocol.
| | Sample_scan_protocol | Microarray were scanned canned according to Affymetric standardized protocol.
| | Sample_data_processing | The data were generated with GCOS, and cel files were analyzed in GeneSpring 7.3 using GC-RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Attila,,Szanto
| | Sample_contact_email | attila.szanto@gmail.com
| | Sample_contact_phone | 617 726-5966
| | Sample_contact_fax | 617 726-6893
| | Sample_contact_laboratory | Currently at Massachusetts General Hospital/Molecular Biology
| | Sample_contact_department | Biochemistry and Molecular Biology
| | Sample_contact_institute | University of Debrecen
| | Sample_contact_address | 1 Egyetem ter
| | Sample_contact_city | Debrecen
| | Sample_contact_zip/postal_code | 4032
| | Sample_contact_country | Hungary
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM411nnn/GSM411226/suppl/GSM411226.CEL.gz
| | Sample_series_id | GSE16386
| | Sample_series_id | GSE16387
| | Sample_data_row_count | 54675
| | |
|
GSM411228 | GPL570 |
|
2 IL-4 macrophage rep 2, 6h
|
Macrophages treated with interleukin-4 and vehicle for 6h
|
donor: 2
tissue: macrophage
activation: IL-4
treatment: Control
time: 6h
|
Gene expression data from macrophages treated with interleukin-4 and vehicle for 6h
|
| Sample_geo_accession | GSM411228
| | Sample_status | Public on Nov 18 2010
| | Sample_submission_date | Jun 02 2009
| | Sample_last_update_date | Nov 18 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell were treated after plating into 6-well cell culture plates with 100 ug/ml IL-4. Simultaneously, vehicle (DMSO:ethanol) or 1 uM Rosiglitazone was added.
| | Sample_growth_protocol_ch1 | Isolated monocytes were cultured in RPMI+10% FCS supplemented with glutamine, penicillin and streptomycin.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized on Human Genome U133 Plus 2 Affymetrix Array according to Affymetric standardized protocol.
| | Sample_scan_protocol | Microarray were scanned canned according to Affymetric standardized protocol.
| | Sample_data_processing | The data were generated with GCOS, and cel files were analyzed in GeneSpring 7.3 using GC-RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Attila,,Szanto
| | Sample_contact_email | attila.szanto@gmail.com
| | Sample_contact_phone | 617 726-5966
| | Sample_contact_fax | 617 726-6893
| | Sample_contact_laboratory | Currently at Massachusetts General Hospital/Molecular Biology
| | Sample_contact_department | Biochemistry and Molecular Biology
| | Sample_contact_institute | University of Debrecen
| | Sample_contact_address | 1 Egyetem ter
| | Sample_contact_city | Debrecen
| | Sample_contact_zip/postal_code | 4032
| | Sample_contact_country | Hungary
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM411nnn/GSM411228/suppl/GSM411228.CEL.gz
| | Sample_series_id | GSE16386
| | Sample_series_id | GSE16387
| | Sample_data_row_count | 54675
| | |
|
GSM411229 | GPL570 |
|
2 IL-4 macrophage+Rosigl. rep 1, 6h
|
Macrophages treated with interleukin-4 and Rosiglitazone for 6h
|
donor: 2
tissue: macrophage
activation: IL-4
treatment: Rosiglitazone
time: 6h
|
Gene expression data from macrophages treated with interleukin-4 and Rosiglitazone for 6h
|
| Sample_geo_accession | GSM411229
| | Sample_status | Public on Nov 18 2010
| | Sample_submission_date | Jun 02 2009
| | Sample_last_update_date | Nov 18 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell were treated after plating into 6-well cell culture plates with 100 ug/ml IL-4. Simultaneously, vehicle (DMSO:ethanol) or 1 uM Rosiglitazone was added.
| | Sample_growth_protocol_ch1 | Isolated monocytes were cultured in RPMI+10% FCS supplemented with glutamine, penicillin and streptomycin.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized on Human Genome U133 Plus 2 Affymetrix Array according to Affymetric standardized protocol.
| | Sample_scan_protocol | Microarray were scanned canned according to Affymetric standardized protocol.
| | Sample_data_processing | The data were generated with GCOS, and cel files were analyzed in GeneSpring 7.3 using GC-RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Attila,,Szanto
| | Sample_contact_email | attila.szanto@gmail.com
| | Sample_contact_phone | 617 726-5966
| | Sample_contact_fax | 617 726-6893
| | Sample_contact_laboratory | Currently at Massachusetts General Hospital/Molecular Biology
| | Sample_contact_department | Biochemistry and Molecular Biology
| | Sample_contact_institute | University of Debrecen
| | Sample_contact_address | 1 Egyetem ter
| | Sample_contact_city | Debrecen
| | Sample_contact_zip/postal_code | 4032
| | Sample_contact_country | Hungary
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM411nnn/GSM411229/suppl/GSM411229.CEL.gz
| | Sample_series_id | GSE16386
| | Sample_series_id | GSE16387
| | Sample_data_row_count | 54675
| | |
|
GSM411230 | GPL570 |
|
2 IL-4 macrophage+Rosigl. rep 2, 6h
|
Macrophages treated with interleukin-4 and Rosiglitazone for 6h
|
donor: 2
tissue: macrophage
activation: IL-4
treatment: Rosiglitazone
time: 6h
|
Gene expression data from macrophages treated with interleukin-4 and Rosiglitazone for 6h
|
| Sample_geo_accession | GSM411230
| | Sample_status | Public on Nov 18 2010
| | Sample_submission_date | Jun 02 2009
| | Sample_last_update_date | Nov 18 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Cell were treated after plating into 6-well cell culture plates with 100 ug/ml IL-4. Simultaneously, vehicle (DMSO:ethanol) or 1 uM Rosiglitazone was added.
| | Sample_growth_protocol_ch1 | Isolated monocytes were cultured in RPMI+10% FCS supplemented with glutamine, penicillin and streptomycin.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized on Human Genome U133 Plus 2 Affymetrix Array according to Affymetric standardized protocol.
| | Sample_scan_protocol | Microarray were scanned canned according to Affymetric standardized protocol.
| | Sample_data_processing | The data were generated with GCOS, and cel files were analyzed in GeneSpring 7.3 using GC-RMA.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Attila,,Szanto
| | Sample_contact_email | attila.szanto@gmail.com
| | Sample_contact_phone | 617 726-5966
| | Sample_contact_fax | 617 726-6893
| | Sample_contact_laboratory | Currently at Massachusetts General Hospital/Molecular Biology
| | Sample_contact_department | Biochemistry and Molecular Biology
| | Sample_contact_institute | University of Debrecen
| | Sample_contact_address | 1 Egyetem ter
| | Sample_contact_city | Debrecen
| | Sample_contact_zip/postal_code | 4032
| | Sample_contact_country | Hungary
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM411nnn/GSM411230/suppl/GSM411230.CEL.gz
| | Sample_series_id | GSE16386
| | Sample_series_id | GSE16387
| | Sample_data_row_count | 54675
| | |
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