Search results for the GEO ID: GSE1654 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM28447 | GPL85 |
|
SCN2.2 Sample 1 (Exp#1-0 hr)
|
SCN2.2 cells (Immortalized from Long-Evans rats)
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
|
Sample_geo_accession | GSM28447
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28447/suppl/GSM28447.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28447/suppl/GSM28447.EXP.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28447/suppl/GSM28447.RPT.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28448 | GPL85 |
|
SCN2.2 Sample 1 (Exp#1-0 hr b)
|
Immortalized rat SCN (SCN2.2) cells
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
|
Sample_geo_accession | GSM28448
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28448/suppl/GSM28448.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28448/suppl/GSM28448.EXP.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28448/suppl/GSM28448.RPT.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28449 | GPL85 |
|
SCN2.2 Sample 3 (Exp#1-6 hr)
|
Immortalized rat SCN (SCN2.2) cells
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
|
Sample_geo_accession | GSM28449
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28449/suppl/GSM28449.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28449/suppl/GSM28449.EXP.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28449/suppl/GSM28449.RPT.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28450 | GPL85 |
|
SCN2.2 Sample 4 (Exp#1-12 hr a)
|
Immortalized rat SCN (SCN2.2) cells
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
|
Sample_geo_accession | GSM28450
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28450/suppl/GSM28450.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28450/suppl/GSM28450.EXP.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28450/suppl/GSM28450.RPT.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28451 | GPL85 |
|
SCN2.2 Sample 5 (Exp#1-12 hr b)
|
Immortalized rat SCN (SCN2.2) cells
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
|
Sample_geo_accession | GSM28451
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28451/suppl/GSM28451.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28451/suppl/GSM28451.EXP.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28451/suppl/GSM28451.RPT.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28453 | GPL85 |
|
SCN2.2 Sample 7 (Exp#1-24 hr)
|
Immortalized rat SCN (SCN2.2) cells
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
Keywords = Suprachiasmatic Nucleus / Circadian Pacemaker / Clock / Oscillator / SCN2.2 /.
|
Sample_geo_accession | GSM28453
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28453/suppl/GSM28453.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28453/suppl/GSM28453.EXP.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28453/suppl/GSM28453.RPT.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28454 | GPL85 |
|
SCN2.2 Sample 8 (Exp#1-30 hr)
|
Immortalized rat SCN (SCN2.2) cells
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
Keywords = Suprachiasmatic Nucleus / Circadian Pacemaker / Clock / Oscillator / SCN2.2 /.
|
Sample_geo_accession | GSM28454
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28454/suppl/GSM28454.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28454/suppl/GSM28454.EXP.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28454/suppl/GSM28454.RPT.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28456 | GPL85 |
|
SCN2.2 Sample 9 (Exp#1-36 hr)
|
Immortalized rat SCN (SCN2.2) cells
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
Keywords = Suprachiasmatic Nucleus / Circadian Pacemaker / Clock / Oscillator / SCN2.2 /.
|
Sample_geo_accession | GSM28456
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28456/suppl/GSM28456.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28456/suppl/GSM28456.EXP.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28456/suppl/GSM28456.RPT.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28458 | GPL85 |
|
SCN2.2 Sample 10 (Exp#1-42 hr a)
|
Immortalized rat SCN (SCN2.2) cells
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
Keywords = Suprachiasmatic Nucleus / Circadian Pacemaker / Clock / Oscillator / SCN2.2 /.
|
Sample_geo_accession | GSM28458
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28458/suppl/GSM28458.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28458/suppl/GSM28458.EXP.EXP.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28458/suppl/GSM28458.RPT.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28459 | GPL85 |
|
SCN2.2 Sample 12 (Exp#2-0 hr)
|
Immortalized rat SCN (SCN2.2) cells
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
Keywords = Suprachiasmatic Nucleus / Circadian Pacemaker / Clock / Oscillator / SCN2.2 /.
|
Sample_geo_accession | GSM28459
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28459/suppl/GSM28459.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28459/suppl/GSM28459.EXP.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28459/suppl/GSM28459.RPT.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28460 | GPL85 |
|
SCN2.2 Sample 13 (Exp#2-6 hr)
|
Immortalized rat SCN (SCN2.2) cells
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
Keywords = Suprachiasmatic Nucleus / Circadian Pacemaker / Clock / Oscillator / SCN2.2 /.
|
Sample_geo_accession | GSM28460
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28460/suppl/GSM28460.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28460/suppl/GSM28460.EXP.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28460/suppl/GSM28460.RPT.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28461 | GPL85 |
|
SCN2.2 Sample 14 (Exp#2-12 hr)
|
Immortalized rat SCN (SCN2.2) cells
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
Keywords = Suprachiasmatic Nucleus / Circadian Pacemaker / Clock / Oscillator / SCN2.2 /.
|
Sample_geo_accession | GSM28461
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28461/suppl/GSM28461.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28461/suppl/GSM28461.EXP.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28461/suppl/GSM28461.RPT.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28462 | GPL85 |
|
SCN2.2 Sample 15 (Exp#2-18 hr)
|
SCN2.2 cells (Immortalized from Long-Evans rats)
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
Keywords = Suprachiasmatic Nucleus / Circadian Pacemaker / Clock / Oscillator / SCN2.2 /.
|
Sample_geo_accession | GSM28462
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28462/suppl/GSM28462.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28462/suppl/GSM28462.EXP.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28462/suppl/GSM28462.RPT.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28463 | GPL85 |
|
SCN2.2 Sample 16 (Exp#2-24 hr)
|
SCN2.2 cells (Immortalized from Long-Evans rats)
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
Keywords = Suprachiasmatic Nucleus / Circadian Pacemaker / Clock / Oscillator / SCN2.2 /.
|
Sample_geo_accession | GSM28463
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28463/suppl/GSM28463.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28463/suppl/GSM28463.EXP.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28463/suppl/GSM28463.RPT.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28464 | GPL85 |
|
SCN2.2 Sample 17 (Exp#2-30 hr)
|
SCN2.2 cells (Immortalized from Long-Evans rats)
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
Keywords = Suprachiasmatic Nucleus / Circadian Pacemaker / Clock / Oscillator / SCN2.2 /.
|
Sample_geo_accession | GSM28464
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28464/suppl/GSM28464.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28464/suppl/GSM28464.EXP.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28464/suppl/GSM28464.RPT.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28465 | GPL85 |
|
SCN2.2 Sample 18 (Exp#2-36 hr)
|
SCN2.2 cells (Immortalized from Long-Evans rats)
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
Keywords = Suprachiasmatic Nucleus / Circadian Pacemaker / Clock / Oscillator / SCN2.2 /.
|
Sample_geo_accession | GSM28465
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28465/suppl/GSM28465.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28465/suppl/GSM28465.EXP.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28465/suppl/GSM28465.RPT.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28466 | GPL85 |
|
SCN2.2 Sample 19 (Exp#2-42 hr)
|
SCN2.2 cells (Immortalized from Long-Evans rats)
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
Keywords = Suprachiasmatic Nucleus / Circadian Pacemaker / Clock / Oscillator / SCN2.2 /.
|
Sample_geo_accession | GSM28466
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28466/suppl/GSM28466.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28466/suppl/GSM28466.EXP.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28466/suppl/GSM28466.RPT.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28467 | GPL85 |
|
SCN2.2 Sample 20 (Exp#3-0 hr)
|
SCN2.2 cells (Immortalized from Long-Evans rats)
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
Keywords = Suprachiasmatic Nucleus / Circadian Pacemaker / Clock / Oscillator / SCN2.2 /.
|
Sample_geo_accession | GSM28467
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28467/suppl/GSM28467.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28467/suppl/GSM28467.EXP.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28468 | GPL85 |
|
SCN2.2 Sample 21 (Exp#3-6 hr)
|
SCN2.2 cells (Immortalized from Long-Evans rats)
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
Keywords = Suprachiasmatic Nucleus / Circadian Pacemaker / Clock / Oscillator / SCN2.2 /.
|
Sample_geo_accession | GSM28468
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28468/suppl/GSM28468.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28468/suppl/GSM28468.EXP.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28469 | GPL85 |
|
SCN2.2 Sample 22 (Exp#3-12 hr)
|
SCN2.2 cells (Immortalized from Long-Evans rats)
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
Keywords = Suprachiasmatic Nucleus / Circadian Pacemaker / Clock / Oscillator / SCN2.2 /.
|
Sample_geo_accession | GSM28469
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28469/suppl/GSM28469.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28469/suppl/GSM28469.EXP.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28470 | GPL85 |
|
SCN2.2 Sample 23 (Exp#3-18 hr)
|
SCN2.2 cells (Immortalized from Long-Evans rats)
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
Keywords = Suprachiasmatic Nucleus / Circadian Pacemaker / Clock / Oscillator / SCN2.2 /.
|
Sample_geo_accession | GSM28470
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28470/suppl/GSM28470.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28470/suppl/GSM28470.EXP.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28471 | GPL85 |
|
SCN2.2 Sample 24 (Exp#3-24 hr)
|
SCN2.2 cells (Immortalized from Long-Evans rats)
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
Keywords = Suprachiasmatic Nucleus / Circadian Pacemaker / Clock / Oscillator / SCN2.2 /.
|
Sample_geo_accession | GSM28471
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28471/suppl/GSM28471.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28471/suppl/GSM28471.EXP.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28472 | GPL85 |
|
SCN2.2 Sample 25 (Exp#3-30 hr)
|
SCN2.2 cells (Immortalized from Long-Evans rats)
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
Keywords = Suprachiasmatic Nucleus / Circadian Pacemaker / Clock / Oscillator / SCN2.2 /.
|
Sample_geo_accession | GSM28472
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28472/suppl/GSM28472.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28472/suppl/GSM28472.EXP.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28473 | GPL85 |
|
SCN2.2 Sample 26 (Exp#3-36 hr)
|
SCN2.2 cells (Immortalized from Long-Evans rats)
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
Keywords = Suprachiasmatic Nucleus / Circadian Pacemaker / Clock / Oscillator / SCN2.2 /.
|
Sample_geo_accession | GSM28473
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28473/suppl/GSM28473.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28473/suppl/GSM28473.EXP.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
GSM28474 | GPL85 |
|
SCN2.2 Sample 27 (Exp#3-42 hr)
|
SCN2.2 cells (Immortalized from Long-Evans rats)
|
|
To determine whether immortalized cells derived from the rat SCN (SCN2.2) retain intrinsic rhythm-generating properties characteristic of the SCN, oscillatory properties of the SCN2.2 transcriptome were analyzed and compared to those found in the rat SCN in vivo using rat U34A Affymetrix GeneChips. SCN2.2 cells were expanded in 6-well plates. At 6-hour intervals cells from a single plate were harvested and pooled for total RNA extraction.
Keywords = Suprachiasmatic Nucleus / Circadian Pacemaker / Clock / Oscillator / SCN2.2 /.
|
Sample_geo_accession | GSM28474
| Sample_status | Public on Oct 08 2004
| Sample_submission_date | Aug 09 2004
| Sample_last_update_date | May 27 2005
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_platform_id | GPL85
| Sample_contact_name | Gus,John,Menger
| Sample_contact_email | gmenger@mail.bio.tamu.edu
| Sample_contact_phone | 979-260-7309
| Sample_contact_laboratory | Earnest
| Sample_contact_department | Anatomy and Neurobiology
| Sample_contact_institute | Texas A&M Health Science Center
| Sample_contact_address |
| Sample_contact_city | College Station
| Sample_contact_state | TX
| Sample_contact_zip/postal_code | 77843-1114
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28474/suppl/GSM28474.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM28nnn/GSM28474/suppl/GSM28474.EXP.EXP.gz
| Sample_series_id | GSE1654
| Sample_series_id | GSE4192
| Sample_data_row_count | 8799
| |
|
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Make groups for comparisons |
(2 groups will be compared at a time) |
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Select GSMs and click on "Add groups" |
Enter the group name here: |
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