Search results for the GEO ID: GSE16660  |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM417840 | GPL1261 |
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Control pool 1 (PFC)
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Prefrontal cortex
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tissue: Prefrontal cortex
environment: LowThreat
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Affymetrix MOE430 2.0
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| Sample_geo_accession | GSM417840
| | Sample_status | Public on Mar 31 2010
| | Sample_submission_date | Jun 17 2009
| | Sample_last_update_date | Mar 31 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Primary prefrontal cortex tissues were isolated and homogenized, and total RNA was extracted using Qiagen RNEasy.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix probe synthesis for gene expression profiling (carried out in UCLA DNA Microarray Core).
| | Sample_hyb_protocol | Standard Affymetrix hybridization protocol for gene expression profiling (carried out in UCLA DNA Microarray Core).
| | Sample_scan_protocol | Standard Affymetrix scan protocol for gene expression profiling (carried out in UCLA DNA Microarray Core).
| | Sample_data_processing | RMA (RMAExpress) processing of Affymetrix .CEL files generated by UCLA DNA Microarray Core.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Steve,,Cole
| | Sample_contact_institute | UCLA School of Medicine
| | Sample_contact_address | 11-934 Factor Bldg, UCLA
| | Sample_contact_city | Los Angeles
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 90095-1678
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM417nnn/GSM417840/suppl/GSM417840.CEL.gz
| | Sample_series_id | GSE16660
| | Sample_data_row_count | 45101
| | |
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GSM417841 | GPL1261 |
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Control pool 2 (PFC)
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Prefrontal cortex
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tissue: Prefrontal cortex
environment: LowThreat
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Affymetrix MOE430 2.0
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| Sample_geo_accession | GSM417841
| | Sample_status | Public on Mar 31 2010
| | Sample_submission_date | Jun 17 2009
| | Sample_last_update_date | Mar 31 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Primary prefrontal cortex tissues were isolated and homogenized, and total RNA was extracted using Qiagen RNEasy.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix probe synthesis for gene expression profiling (carried out in UCLA DNA Microarray Core).
| | Sample_hyb_protocol | Standard Affymetrix hybridization protocol for gene expression profiling (carried out in UCLA DNA Microarray Core).
| | Sample_scan_protocol | Standard Affymetrix scan protocol for gene expression profiling (carried out in UCLA DNA Microarray Core).
| | Sample_data_processing | RMA (RMAExpress) processing of Affymetrix .CEL files generated by UCLA DNA Microarray Core.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Steve,,Cole
| | Sample_contact_institute | UCLA School of Medicine
| | Sample_contact_address | 11-934 Factor Bldg, UCLA
| | Sample_contact_city | Los Angeles
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 90095-1678
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM417nnn/GSM417841/suppl/GSM417841.CEL.gz
| | Sample_series_id | GSE16660
| | Sample_data_row_count | 45101
| | |
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GSM417842 | GPL1261 |
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Threat pool 1 (PFC)
|
Prefrontal cortex
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tissue: Prefrontal cortex
environment: HighThreat
|
Affymetrix MOE430 2.0
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| Sample_geo_accession | GSM417842
| | Sample_status | Public on Mar 31 2010
| | Sample_submission_date | Jun 17 2009
| | Sample_last_update_date | Mar 31 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Primary prefrontal cortex tissues were isolated and homogenized, and total RNA was extracted using Qiagen RNEasy.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix probe synthesis for gene expression profiling (carried out in UCLA DNA Microarray Core).
| | Sample_hyb_protocol | Standard Affymetrix hybridization protocol for gene expression profiling (carried out in UCLA DNA Microarray Core).
| | Sample_scan_protocol | Standard Affymetrix scan protocol for gene expression profiling (carried out in UCLA DNA Microarray Core).
| | Sample_data_processing | RMA (RMAExpress) processing of Affymetrix .CEL files generated by UCLA DNA Microarray Core.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Steve,,Cole
| | Sample_contact_institute | UCLA School of Medicine
| | Sample_contact_address | 11-934 Factor Bldg, UCLA
| | Sample_contact_city | Los Angeles
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 90095-1678
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM417nnn/GSM417842/suppl/GSM417842.CEL.gz
| | Sample_series_id | GSE16660
| | Sample_data_row_count | 45101
| | |
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GSM417843 | GPL1261 |
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Threat pool 2 (PFC)
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Prefrontal cortex
|
tissue: Prefrontal cortex
environment: HighThreat
|
Affymetrix MOE430 2.0
|
| Sample_geo_accession | GSM417843
| | Sample_status | Public on Mar 31 2010
| | Sample_submission_date | Jun 17 2009
| | Sample_last_update_date | Mar 31 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Primary prefrontal cortex tissues were isolated and homogenized, and total RNA was extracted using Qiagen RNEasy.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Standard Affymetrix probe synthesis for gene expression profiling (carried out in UCLA DNA Microarray Core).
| | Sample_hyb_protocol | Standard Affymetrix hybridization protocol for gene expression profiling (carried out in UCLA DNA Microarray Core).
| | Sample_scan_protocol | Standard Affymetrix scan protocol for gene expression profiling (carried out in UCLA DNA Microarray Core).
| | Sample_data_processing | RMA (RMAExpress) processing of Affymetrix .CEL files generated by UCLA DNA Microarray Core.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Steve,,Cole
| | Sample_contact_institute | UCLA School of Medicine
| | Sample_contact_address | 11-934 Factor Bldg, UCLA
| | Sample_contact_city | Los Angeles
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 90095-1678
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM417nnn/GSM417843/suppl/GSM417843.CEL.gz
| | Sample_series_id | GSE16660
| | Sample_data_row_count | 45101
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