Search results for the GEO ID: GSE16906 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM423834 | GPL570 |
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Endometrial stromal cell - control/vector 1
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endometrial stromal cell - control/vector1, 3 days post infection
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cell type: endometrial stromal cells
growth phase: early passage
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Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY)
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Sample_geo_accession | GSM423834
| Sample_status | Public on Jul 01 2009
| Sample_submission_date | Jun 30 2009
| Sample_last_update_date | Jun 30 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | isolated in Dr. Linda Tseng laboratory
| Sample_treatment_protocol_ch1 | cultured in RPMI 1640 with 10% FBS as described previously (Liu and Tseng, 1979), infected with control nonreplicative retrovirus (vector)
| Sample_growth_protocol_ch1 | cultured in RPMI 1640 with 10% FBS as described previously (Liu and Tseng, 1979), harvested for mRNAs analysis on day-3 post-infection
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | DNA-free total RNA was isolated from cell cultures (day-3 post-infection) using RNAqueous-4PCR Kit (Ambion)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY)
| Sample_hyb_protocol | Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY)
| Sample_scan_protocol | Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY),
| Sample_data_processing | MAS 5 protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY),
| Sample_platform_id | GPL570
| Sample_contact_name | Anatoly,,Mikhailik
| Sample_contact_email | anatoly_mikhailik@yahoo.com
| Sample_contact_phone | 631 444 3304
| Sample_contact_fax | 631 444 3129
| Sample_contact_laboratory | Linda Tseng/Eli Hatchwell
| Sample_contact_department | OB/GYN/Pathology
| Sample_contact_institute | SUNY at Stony Brook
| Sample_contact_address | HSC-T8, Rm 053
| Sample_contact_city | Stony Brook
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 11794-8088
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM423nnn/GSM423834/suppl/GSM423834.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM423nnn/GSM423834/suppl/GSM423834.CHP.gz
| Sample_series_id | GSE16906
| Sample_data_row_count | 54675
| |
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GSM423835 | GPL570 |
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Endometrial stromal cell - Jag1 retrovirus infected 1
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endometrial stromal cell - Jag1 retrovirus infected1, 3 days post infection
|
cell type: endometrial stromal cells
growth phase: early passage
|
Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY)
|
Sample_geo_accession | GSM423835
| Sample_status | Public on Jul 01 2009
| Sample_submission_date | Jun 30 2009
| Sample_last_update_date | Jun 30 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | isolated in Dr. Linda Tseng laboratory
| Sample_treatment_protocol_ch1 | cultured in RPMI 1640 with 10% FBS as described previously (Liu and Tseng, 1979), infected with Jag1 nonreplicative retrovirus
| Sample_growth_protocol_ch1 | cultured in RPMI 1640 with 10% FBS as described previously (Liu and Tseng, 1979), harvested for mRNAs analysis on day-3 post-infection
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | DNA-free total RNA was isolated from cell cultures (day-3 post-infection) using RNAqueous-4PCR Kit (Ambion)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY)
| Sample_hyb_protocol | Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY)
| Sample_scan_protocol | Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY),
| Sample_data_processing | MAS 5 protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY),
| Sample_platform_id | GPL570
| Sample_contact_name | Anatoly,,Mikhailik
| Sample_contact_email | anatoly_mikhailik@yahoo.com
| Sample_contact_phone | 631 444 3304
| Sample_contact_fax | 631 444 3129
| Sample_contact_laboratory | Linda Tseng/Eli Hatchwell
| Sample_contact_department | OB/GYN/Pathology
| Sample_contact_institute | SUNY at Stony Brook
| Sample_contact_address | HSC-T8, Rm 053
| Sample_contact_city | Stony Brook
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 11794-8088
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM423nnn/GSM423835/suppl/GSM423835.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM423nnn/GSM423835/suppl/GSM423835.CHP.gz
| Sample_series_id | GSE16906
| Sample_data_row_count | 54675
| |
|
GSM423840 | GPL570 |
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Endometrial stromal cell - Jag1 retrovirus infected 2
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endometrial stromal cell - Jag1 retrovirus infected2, 3 days post infection
|
cell type: endometrial stromal cells
growth phase: early passage
|
Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY)
|
Sample_geo_accession | GSM423840
| Sample_status | Public on Jul 01 2009
| Sample_submission_date | Jun 30 2009
| Sample_last_update_date | Jun 30 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | isolated in Dr. Linda Tseng laboratory
| Sample_treatment_protocol_ch1 | cultured in RPMI 1640 with 10% FBS as described previously (Liu and Tseng, 1979), infected with Jag1 nonreplicative retrovirus
| Sample_growth_protocol_ch1 | cultured in RPMI 1640 with 10% FBS as described previously (Liu and Tseng, 1979), harvested for mRNAs analysis on day-3 post-infection
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | DNA-free total RNA was isolated from cell cultures (day-3 post-infection) using RNAqueous-4PCR Kit (Ambion)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY)
| Sample_hyb_protocol | Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY)
| Sample_scan_protocol | Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY),
| Sample_data_processing | MAS 5 protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY),
| Sample_platform_id | GPL570
| Sample_contact_name | Anatoly,,Mikhailik
| Sample_contact_email | anatoly_mikhailik@yahoo.com
| Sample_contact_phone | 631 444 3304
| Sample_contact_fax | 631 444 3129
| Sample_contact_laboratory | Linda Tseng/Eli Hatchwell
| Sample_contact_department | OB/GYN/Pathology
| Sample_contact_institute | SUNY at Stony Brook
| Sample_contact_address | HSC-T8, Rm 053
| Sample_contact_city | Stony Brook
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 11794-8088
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM423nnn/GSM423840/suppl/GSM423840.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM423nnn/GSM423840/suppl/GSM423840.CHP.gz
| Sample_series_id | GSE16906
| Sample_data_row_count | 54675
| |
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GSM423841 | GPL570 |
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Endometrial stromal cell - Jag1 retrovirus infected 3
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endometrial stromal cell - Jag1 retrovirus infected3, 3 days post infection
|
cell type: endometrial stromal cells
growth phase: early passage
|
Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY)
|
Sample_geo_accession | GSM423841
| Sample_status | Public on Jul 01 2009
| Sample_submission_date | Jun 30 2009
| Sample_last_update_date | Jun 30 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | isolated in Dr. Linda Tseng laboratory
| Sample_treatment_protocol_ch1 | cultured in RPMI 1640 with 10% FBS as described previously (Liu and Tseng, 1979), infected with Jag1 nonreplicative retrovirus
| Sample_growth_protocol_ch1 | cultured in RPMI 1640 with 10% FBS as described previously (Liu and Tseng, 1979), harvested for mRNAs analysis on day-3 post-infection
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | DNA-free total RNA was isolated from cell cultures (day-3 post-infection) using RNAqueous-4PCR Kit (Ambion)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY)
| Sample_hyb_protocol | Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY)
| Sample_scan_protocol | Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY),
| Sample_data_processing | MAS 5 protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY),
| Sample_platform_id | GPL570
| Sample_contact_name | Anatoly,,Mikhailik
| Sample_contact_email | anatoly_mikhailik@yahoo.com
| Sample_contact_phone | 631 444 3304
| Sample_contact_fax | 631 444 3129
| Sample_contact_laboratory | Linda Tseng/Eli Hatchwell
| Sample_contact_department | OB/GYN/Pathology
| Sample_contact_institute | SUNY at Stony Brook
| Sample_contact_address | HSC-T8, Rm 053
| Sample_contact_city | Stony Brook
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 11794-8088
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM423nnn/GSM423841/suppl/GSM423841.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM423nnn/GSM423841/suppl/GSM423841.CHP.gz
| Sample_series_id | GSE16906
| Sample_data_row_count | 54675
| |
|
GSM423842 | GPL570 |
|
Endometrial stromal cell - control/vector 2
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endometrial stromal cell - control/vector2, 3 days post infection
|
cell type: endometrial stromal cells
growth phase: early passage
|
Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY)
|
Sample_geo_accession | GSM423842
| Sample_status | Public on Jul 01 2009
| Sample_submission_date | Jun 30 2009
| Sample_last_update_date | Jun 30 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | isolated in Dr. Linda Tseng laboratory
| Sample_treatment_protocol_ch1 | cultured in RPMI 1640 with 10% FBS as described previously (Liu and Tseng, 1979), infected with control nonreplicative retrovirus (vector)
| Sample_growth_protocol_ch1 | cultured in RPMI 1640 with 10% FBS as described previously (Liu and Tseng, 1979), harvested for mRNAs analysis on day-3 post-infection
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | DNA-free total RNA was isolated from cell cultures (day-3 post-infection) using RNAqueous-4PCR Kit (Ambion)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY)
| Sample_hyb_protocol | Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY)
| Sample_scan_protocol | Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY),
| Sample_data_processing | MAS 5 protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY),
| Sample_platform_id | GPL570
| Sample_contact_name | Anatoly,,Mikhailik
| Sample_contact_email | anatoly_mikhailik@yahoo.com
| Sample_contact_phone | 631 444 3304
| Sample_contact_fax | 631 444 3129
| Sample_contact_laboratory | Linda Tseng/Eli Hatchwell
| Sample_contact_department | OB/GYN/Pathology
| Sample_contact_institute | SUNY at Stony Brook
| Sample_contact_address | HSC-T8, Rm 053
| Sample_contact_city | Stony Brook
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 11794-8088
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM423nnn/GSM423842/suppl/GSM423842.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM423nnn/GSM423842/suppl/GSM423842.CHP.gz
| Sample_series_id | GSE16906
| Sample_data_row_count | 54675
| |
|
GSM423843 | GPL570 |
|
Endometrial stromal cell - control/vector 3
|
endometrial stromal cell - control/vector1, 3 days post infection
|
cell type: endometrial stromal cells
growth phase: early passage
|
Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY)
|
Sample_geo_accession | GSM423843
| Sample_status | Public on Jul 01 2009
| Sample_submission_date | Jun 30 2009
| Sample_last_update_date | Jun 30 2009
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_biomaterial_provider_ch1 | isolated in Dr. Linda Tseng laboratory
| Sample_treatment_protocol_ch1 | cultured in RPMI 1640 with 10% FBS as described previously (Liu and Tseng, 1979), infected with control nonreplicative retrovirus (vector)
| Sample_growth_protocol_ch1 | cultured in RPMI 1640 with 10% FBS as described previously (Liu and Tseng, 1979), harvested for mRNAs analysis on day-3 post-infection
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | DNA-free total RNA was isolated from cell cultures (day-3 post-infection) using RNAqueous-4PCR Kit (Ambion)
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY)
| Sample_hyb_protocol | Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY)
| Sample_scan_protocol | Standard Affymetrix protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY),
| Sample_data_processing | MAS 5 protocol performed at SUNY DNA Microarray Facility (Stony Brook University, NY),
| Sample_platform_id | GPL570
| Sample_contact_name | Anatoly,,Mikhailik
| Sample_contact_email | anatoly_mikhailik@yahoo.com
| Sample_contact_phone | 631 444 3304
| Sample_contact_fax | 631 444 3129
| Sample_contact_laboratory | Linda Tseng/Eli Hatchwell
| Sample_contact_department | OB/GYN/Pathology
| Sample_contact_institute | SUNY at Stony Brook
| Sample_contact_address | HSC-T8, Rm 053
| Sample_contact_city | Stony Brook
| Sample_contact_state | NY
| Sample_contact_zip/postal_code | 11794-8088
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM423nnn/GSM423843/suppl/GSM423843.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM423nnn/GSM423843/suppl/GSM423843.CHP.gz
| Sample_series_id | GSE16906
| Sample_data_row_count | 54675
| |
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