Search results for the GEO ID: GSE17014  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM425648 | GPL570 |
|
HD-1bri 1
|
Dermal cell isolate from 4 neonatal foreskin, HD-1bri
|
tissue: foreskin
cell type: primary dermal cells
facs-sorted cell subpopulation: HD-1bri cells
developmental stage: neonatal
|
Gene expression data from human FACS seperated subpopulations of dermal cell isolates of neonatal foreskins
|
| Sample_geo_accession | GSM425648
| | Sample_status | Public on Oct 01 2009
| | Sample_submission_date | Jul 08 2009
| | Sample_last_update_date | Sep 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Enzyme digested foreskin to isolate dermal cells
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Rneasy kit protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol two-cycles target labeling kit from 100 ng total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA was hybridized for 16 hr at 45C on GeneChip Affymetrix HG-U133 2.0plus expression array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using Affymetrix GS300-7G scanner
| | Sample_data_processing | The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method
| | Sample_platform_id | GPL570
| | Sample_contact_name | Holger,,Schlueter
| | Sample_contact_email | holger.schluter@petermac.org
| | Sample_contact_phone | 0061393299479
| | Sample_contact_fax | 0061396561411
| | Sample_contact_laboratory | Epithelial Stem Cell Biology Lab
| | Sample_contact_department | Research
| | Sample_contact_institute | Peter Mac Callum cancer Centre
| | Sample_contact_address | Locked Bag 1
| | Sample_contact_city | Melbourne
| | Sample_contact_state | Victoria
| | Sample_contact_zip/postal_code | 8006
| | Sample_contact_country | Australia
| | Sample_contact_web_link | www.petermac.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM425nnn/GSM425648/suppl/GSM425648.CEL.gz
| | Sample_series_id | GSE17014
| | Sample_data_row_count | 54675
| | |
|
GSM425649 | GPL570 |
|
HD-1bri 2
|
Dermal cell isolate from 4 neonatal foreskin, HD-1bri
|
tissue: foreskin
cell type: primary dermal cells
facs-sorted cell subpopulation: HD-1bri cells
developmental stage: neonatal
|
Gene expression data from human FACS seperated subpopulations of dermal cell isolates of neonatal foreskins
|
| Sample_geo_accession | GSM425649
| | Sample_status | Public on Oct 01 2009
| | Sample_submission_date | Jul 08 2009
| | Sample_last_update_date | Sep 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Enzyme digested foreskin to isolate dermal cells
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Rneasy kit protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol two-cycles target labeling kit from 100 ng total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA was hybridized for 16 hr at 45C on GeneChip Affymetrix HG-U133 2.0plus expression array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using Affymetrix GS300-7G scanner
| | Sample_data_processing | The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method
| | Sample_platform_id | GPL570
| | Sample_contact_name | Holger,,Schlueter
| | Sample_contact_email | holger.schluter@petermac.org
| | Sample_contact_phone | 0061393299479
| | Sample_contact_fax | 0061396561411
| | Sample_contact_laboratory | Epithelial Stem Cell Biology Lab
| | Sample_contact_department | Research
| | Sample_contact_institute | Peter Mac Callum cancer Centre
| | Sample_contact_address | Locked Bag 1
| | Sample_contact_city | Melbourne
| | Sample_contact_state | Victoria
| | Sample_contact_zip/postal_code | 8006
| | Sample_contact_country | Australia
| | Sample_contact_web_link | www.petermac.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM425nnn/GSM425649/suppl/GSM425649.CEL.gz
| | Sample_series_id | GSE17014
| | Sample_data_row_count | 54675
| | |
|
GSM425650 | GPL570 |
|
HD-1bri 3
|
Dermal cell isolate from 4 neonatal foreskin, HD-1bri
|
tissue: foreskin
cell type: primary dermal cells
facs-sorted cell subpopulation: HD-1bri cells
developmental stage: neonatal
|
Gene expression data from human FACS seperated subpopulations of dermal cell isolates of neonatal foreskins
|
| Sample_geo_accession | GSM425650
| | Sample_status | Public on Oct 01 2009
| | Sample_submission_date | Jul 08 2009
| | Sample_last_update_date | Sep 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Enzyme digested foreskin to isolate dermal cells
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Rneasy kit protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol two-cycles target labeling kit from 100 ng total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA was hybridized for 16 hr at 45C on GeneChip Affymetrix HG-U133 2.0plus expression array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using Affymetrix GS300-7G scanner
| | Sample_data_processing | The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method
| | Sample_platform_id | GPL570
| | Sample_contact_name | Holger,,Schlueter
| | Sample_contact_email | holger.schluter@petermac.org
| | Sample_contact_phone | 0061393299479
| | Sample_contact_fax | 0061396561411
| | Sample_contact_laboratory | Epithelial Stem Cell Biology Lab
| | Sample_contact_department | Research
| | Sample_contact_institute | Peter Mac Callum cancer Centre
| | Sample_contact_address | Locked Bag 1
| | Sample_contact_city | Melbourne
| | Sample_contact_state | Victoria
| | Sample_contact_zip/postal_code | 8006
| | Sample_contact_country | Australia
| | Sample_contact_web_link | www.petermac.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM425nnn/GSM425650/suppl/GSM425650.CEL.gz
| | Sample_series_id | GSE17014
| | Sample_data_row_count | 54675
| | |
|
GSM425651 | GPL570 |
|
HD-1bri 4
|
Dermal cell isolate from 4 neonatal foreskin, HD-1bri
|
tissue: foreskin
cell type: primary dermal cells
facs-sorted cell subpopulation: HD-1bri cells
developmental stage: neonatal
|
Gene expression data from human FACS seperated subpopulations of dermal cell isolates of neonatal foreskins
|
| Sample_geo_accession | GSM425651
| | Sample_status | Public on Oct 01 2009
| | Sample_submission_date | Jul 08 2009
| | Sample_last_update_date | Sep 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Enzyme digested foreskin to isolate dermal cells
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Rneasy kit protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol two-cycles target labeling kit from 100 ng total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA was hybridized for 16 hr at 45C on GeneChip Affymetrix HG-U133 2.0plus expression array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using Affymetrix GS300-7G scanner
| | Sample_data_processing | The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method
| | Sample_platform_id | GPL570
| | Sample_contact_name | Holger,,Schlueter
| | Sample_contact_email | holger.schluter@petermac.org
| | Sample_contact_phone | 0061393299479
| | Sample_contact_fax | 0061396561411
| | Sample_contact_laboratory | Epithelial Stem Cell Biology Lab
| | Sample_contact_department | Research
| | Sample_contact_institute | Peter Mac Callum cancer Centre
| | Sample_contact_address | Locked Bag 1
| | Sample_contact_city | Melbourne
| | Sample_contact_state | Victoria
| | Sample_contact_zip/postal_code | 8006
| | Sample_contact_country | Australia
| | Sample_contact_web_link | www.petermac.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM425nnn/GSM425651/suppl/GSM425651.CEL.gz
| | Sample_series_id | GSE17014
| | Sample_data_row_count | 54675
| | |
|
GSM425652 | GPL570 |
|
HD-1dim 1
|
Dermal cell isolate from 4 neonatal foreskin, HD-1dim
|
tissue: foreskin
cell type: primary dermal cells
facs-sorted cell subpopulation: HD-1dim cells
developmental stage: neonatal
|
Gene expression data from human FACS seperated subpopulations of dermal cell isolates of neonatal foreskins
|
| Sample_geo_accession | GSM425652
| | Sample_status | Public on Oct 01 2009
| | Sample_submission_date | Jul 08 2009
| | Sample_last_update_date | Sep 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Enzyme digested foreskin to isolate dermal cells
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Rneasy kit protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol two-cycles target labeling kit from 100 ng total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA was hybridized for 16 hr at 45C on GeneChip Affymetrix HG-U133 2.0plus expression array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using Affymetrix GS300-7G scanner
| | Sample_data_processing | The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method
| | Sample_platform_id | GPL570
| | Sample_contact_name | Holger,,Schlueter
| | Sample_contact_email | holger.schluter@petermac.org
| | Sample_contact_phone | 0061393299479
| | Sample_contact_fax | 0061396561411
| | Sample_contact_laboratory | Epithelial Stem Cell Biology Lab
| | Sample_contact_department | Research
| | Sample_contact_institute | Peter Mac Callum cancer Centre
| | Sample_contact_address | Locked Bag 1
| | Sample_contact_city | Melbourne
| | Sample_contact_state | Victoria
| | Sample_contact_zip/postal_code | 8006
| | Sample_contact_country | Australia
| | Sample_contact_web_link | www.petermac.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM425nnn/GSM425652/suppl/GSM425652.CEL.gz
| | Sample_series_id | GSE17014
| | Sample_data_row_count | 54675
| | |
|
GSM425653 | GPL570 |
|
HD-1dim 2
|
Dermal cell isolate from 4 neonatal foreskin, HD-1dim
|
tissue: foreskin
cell type: primary dermal cells
facs-sorted cell subpopulation: HD-1dim cells
developmental stage: neonatal
|
Gene expression data from human FACS seperated subpopulations of dermal cell isolates of neonatal foreskins
|
| Sample_geo_accession | GSM425653
| | Sample_status | Public on Oct 01 2009
| | Sample_submission_date | Jul 08 2009
| | Sample_last_update_date | Sep 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Enzyme digested foreskin to isolate dermal cells
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Rneasy kit protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol two-cycles target labeling kit from 100 ng total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA was hybridized for 16 hr at 45C on GeneChip Affymetrix HG-U133 2.0plus expression array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using Affymetrix GS300-7G scanner
| | Sample_data_processing | The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method
| | Sample_platform_id | GPL570
| | Sample_contact_name | Holger,,Schlueter
| | Sample_contact_email | holger.schluter@petermac.org
| | Sample_contact_phone | 0061393299479
| | Sample_contact_fax | 0061396561411
| | Sample_contact_laboratory | Epithelial Stem Cell Biology Lab
| | Sample_contact_department | Research
| | Sample_contact_institute | Peter Mac Callum cancer Centre
| | Sample_contact_address | Locked Bag 1
| | Sample_contact_city | Melbourne
| | Sample_contact_state | Victoria
| | Sample_contact_zip/postal_code | 8006
| | Sample_contact_country | Australia
| | Sample_contact_web_link | www.petermac.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM425nnn/GSM425653/suppl/GSM425653.CEL.gz
| | Sample_series_id | GSE17014
| | Sample_data_row_count | 54675
| | |
|
GSM425654 | GPL570 |
|
HD-1dim 3
|
Dermal cell isolate from 4 neonatal foreskin, HD-1dim
|
tissue: foreskin
cell type: primary dermal cells
facs-sorted cell subpopulation: HD-1dim cells
developmental stage: neonatal
|
Gene expression data from human FACS seperated subpopulations of dermal cell isolates of neonatal foreskins
|
| Sample_geo_accession | GSM425654
| | Sample_status | Public on Oct 01 2009
| | Sample_submission_date | Jul 08 2009
| | Sample_last_update_date | Sep 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Enzyme digested foreskin to isolate dermal cells
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Rneasy kit protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol two-cycles target labeling kit from 100 ng total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA was hybridized for 16 hr at 45C on GeneChip Affymetrix HG-U133 2.0plus expression array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using Affymetrix GS300-7G scanner
| | Sample_data_processing | The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method
| | Sample_platform_id | GPL570
| | Sample_contact_name | Holger,,Schlueter
| | Sample_contact_email | holger.schluter@petermac.org
| | Sample_contact_phone | 0061393299479
| | Sample_contact_fax | 0061396561411
| | Sample_contact_laboratory | Epithelial Stem Cell Biology Lab
| | Sample_contact_department | Research
| | Sample_contact_institute | Peter Mac Callum cancer Centre
| | Sample_contact_address | Locked Bag 1
| | Sample_contact_city | Melbourne
| | Sample_contact_state | Victoria
| | Sample_contact_zip/postal_code | 8006
| | Sample_contact_country | Australia
| | Sample_contact_web_link | www.petermac.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM425nnn/GSM425654/suppl/GSM425654.CEL.gz
| | Sample_series_id | GSE17014
| | Sample_data_row_count | 54675
| | |
|
GSM425655 | GPL570 |
|
HD-1dim 4
|
Dermal cell isolate from 4 neonatal foreskin, HD-1dim
|
tissue: foreskin
cell type: primary dermal cells
facs-sorted cell subpopulation: HD-1dim cells
developmental stage: neonatal
|
Gene expression data from human FACS seperated subpopulations of dermal cell isolates of neonatal foreskins
|
| Sample_geo_accession | GSM425655
| | Sample_status | Public on Oct 01 2009
| | Sample_submission_date | Jul 08 2009
| | Sample_last_update_date | Sep 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Enzyme digested foreskin to isolate dermal cells
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Rneasy kit protocol
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol two-cycles target labeling kit from 100 ng total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, cRNA was hybridized for 16 hr at 45C on GeneChip Affymetrix HG-U133 2.0plus expression array. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using Affymetrix GS300-7G scanner
| | Sample_data_processing | The data were analyzed with Gene Chip Operating Software Version 1.4 using Affymetrix default analysis settings. The CEL files generated was later normalized using the RMA method
| | Sample_platform_id | GPL570
| | Sample_contact_name | Holger,,Schlueter
| | Sample_contact_email | holger.schluter@petermac.org
| | Sample_contact_phone | 0061393299479
| | Sample_contact_fax | 0061396561411
| | Sample_contact_laboratory | Epithelial Stem Cell Biology Lab
| | Sample_contact_department | Research
| | Sample_contact_institute | Peter Mac Callum cancer Centre
| | Sample_contact_address | Locked Bag 1
| | Sample_contact_city | Melbourne
| | Sample_contact_state | Victoria
| | Sample_contact_zip/postal_code | 8006
| | Sample_contact_country | Australia
| | Sample_contact_web_link | www.petermac.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM425nnn/GSM425655/suppl/GSM425655.CEL.gz
| | Sample_series_id | GSE17014
| | Sample_data_row_count | 54675
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