Search results for the GEO ID: GSE17186 ![](/q11.jpeg) |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM422294 | GPL570 |
|
Human memory B cells unstimulated, rep1
|
memory B cell
|
tissue: blood
cell type: PBMC
b-cell subset: CD20+CD10-CD27+
|
Majority of human memory B cells is CD27+ and CD10- and thus the gating strategy is to isolate CD10- and CD27+ B cells.
CD20+CD10-CD27+ cells FACS sorted.
Sample taken from healthy donor.
|
Sample_geo_accession | GSM422294
| Sample_status | Public on Mar 31 2010
| Sample_submission_date | Jun 25 2009
| Sample_last_update_date | Mar 31 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA extracted as per Trizol protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | According to Affymetrix Hu133Plus2 labelling protocol
| Sample_hyb_protocol | According to Affymetrix Hu133Plus2 hybridisation protocol
| Sample_scan_protocol | According to Affymetrix GCOS version 1.4
| Sample_data_processing | Analysed in GeneSpring Software version 7.3.1.
| Sample_data_processing | Normalisation:
| Sample_data_processing | 1. Per Gene: normalised to media with cut off value 5 in raw signal.
| Sample_platform_id | GPL570
| Sample_contact_name | Santi,,Suryani
| Sample_contact_email | s.suryani@garvan.org.au
| Sample_contact_department | Immunology and Inflammation
| Sample_contact_institute | Garvan Institute of Medical Research
| Sample_contact_address | 384 Victoria Street, Darlinghurst
| Sample_contact_city | Sydney
| Sample_contact_state | NSW
| Sample_contact_zip/postal_code | 2010
| Sample_contact_country | Australia
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM422nnn/GSM422294/suppl/GSM422294.CEL.gz
| Sample_series_id | GSE17186
| Sample_data_row_count | 54675
| |
|
GSM422295 | GPL570 |
|
Human naive B cells unstimulated, rep1
|
naive B cell
|
tissue: blood
cell type: PBMC
b-cell subset: CD20+CD10-CD27-
|
Sample taken from healthy donor.
|
Sample_geo_accession | GSM422295
| Sample_status | Public on Mar 31 2010
| Sample_submission_date | Jun 25 2009
| Sample_last_update_date | Mar 31 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA extracted as per Trizol protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | According to Affymetrix Hu133Plus2 labelling protocol
| Sample_hyb_protocol | According to Affymetrix Hu133Plus2 hybridisation protocol
| Sample_scan_protocol | According to Affymetrix GCOS version 1.4
| Sample_data_processing | Analysed in GeneSpring Software version 7.3.1.
| Sample_data_processing | Normalisation:
| Sample_data_processing | 1. Per Gene: normalised to media with cut off value 5 in raw signal.
| Sample_platform_id | GPL570
| Sample_contact_name | Santi,,Suryani
| Sample_contact_email | s.suryani@garvan.org.au
| Sample_contact_department | Immunology and Inflammation
| Sample_contact_institute | Garvan Institute of Medical Research
| Sample_contact_address | 384 Victoria Street, Darlinghurst
| Sample_contact_city | Sydney
| Sample_contact_state | NSW
| Sample_contact_zip/postal_code | 2010
| Sample_contact_country | Australia
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM422nnn/GSM422295/suppl/GSM422295.CEL.gz
| Sample_series_id | GSE17186
| Sample_data_row_count | 54675
| |
|
GSM422296 | GPL570 |
|
Human CD21lo transitional B cells unstimulated, rep1
|
CD21lo transitional B cells
|
tissue: blood
cell type: PBMC
b-cell subset: CD20+CD10+CD27-CD21lo
|
Sample taken from healthy donor.
|
Sample_geo_accession | GSM422296
| Sample_status | Public on Mar 31 2010
| Sample_submission_date | Jun 25 2009
| Sample_last_update_date | Mar 31 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA extracted as per Trizol protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | According to Affymetrix Hu133Plus2 labelling protocol
| Sample_hyb_protocol | According to Affymetrix Hu133Plus2 hybridisation protocol
| Sample_scan_protocol | According to Affymetrix GCOS version 1.4
| Sample_data_processing | Analysed in GeneSpring Software version 7.3.1.
| Sample_data_processing | Normalisation:
| Sample_data_processing | 1. Per Gene: normalised to media with cut off value 5 in raw signal.
| Sample_platform_id | GPL570
| Sample_contact_name | Santi,,Suryani
| Sample_contact_email | s.suryani@garvan.org.au
| Sample_contact_department | Immunology and Inflammation
| Sample_contact_institute | Garvan Institute of Medical Research
| Sample_contact_address | 384 Victoria Street, Darlinghurst
| Sample_contact_city | Sydney
| Sample_contact_state | NSW
| Sample_contact_zip/postal_code | 2010
| Sample_contact_country | Australia
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM422nnn/GSM422296/suppl/GSM422296.CEL.gz
| Sample_series_id | GSE17186
| Sample_data_row_count | 54675
| |
|
GSM422297 | GPL570 |
|
Human CD21hi transitional B cells unstimulated, rep1
|
CD21hi transitional B cells
|
tissue: blood
cell type: PBMC
b-cell subset: CD20+CD10+CD27-CD21hi
|
Sample taken from healthy donor.
|
Sample_geo_accession | GSM422297
| Sample_status | Public on Mar 31 2010
| Sample_submission_date | Jun 25 2009
| Sample_last_update_date | Mar 31 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA extracted as per Trizol protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | According to Affymetrix Hu133Plus2 labelling protocol
| Sample_hyb_protocol | According to Affymetrix Hu133Plus2 hybridisation protocol
| Sample_scan_protocol | According to Affymetrix GCOS version 1.4
| Sample_data_processing | Analysed in GeneSpring Software version 7.3.1.
| Sample_data_processing | Normalisation:
| Sample_data_processing | 1. Per Gene: normalised to media with cut off value 5 in raw signal.
| Sample_platform_id | GPL570
| Sample_contact_name | Santi,,Suryani
| Sample_contact_email | s.suryani@garvan.org.au
| Sample_contact_department | Immunology and Inflammation
| Sample_contact_institute | Garvan Institute of Medical Research
| Sample_contact_address | 384 Victoria Street, Darlinghurst
| Sample_contact_city | Sydney
| Sample_contact_state | NSW
| Sample_contact_zip/postal_code | 2010
| Sample_contact_country | Australia
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM422nnn/GSM422297/suppl/GSM422297.CEL.gz
| Sample_series_id | GSE17186
| Sample_data_row_count | 54675
| |
|
GSM422298 | GPL570 |
|
Cord blood naive B cells
|
Cord blood naive B cells
|
tissue: cord blood
b-cell subset: CD20+CD10-CD27-
|
Sample pooled from 2 cord blood donors.
|
Sample_geo_accession | GSM422298
| Sample_status | Public on Mar 31 2010
| Sample_submission_date | Jun 25 2009
| Sample_last_update_date | Mar 31 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA extracted as per Trizol protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | According to Affymetrix Hu133Plus2 labelling protocol
| Sample_hyb_protocol | According to Affymetrix Hu133Plus2 hybridisation protocol
| Sample_scan_protocol | According to Affymetrix GCOS version 1.4
| Sample_data_processing | Analysed in GeneSpring Software version 7.3.1.
| Sample_data_processing | Normalisation:
| Sample_data_processing | 1. Per Gene: normalised to media with cut off value 5 in raw signal.
| Sample_platform_id | GPL570
| Sample_contact_name | Santi,,Suryani
| Sample_contact_email | s.suryani@garvan.org.au
| Sample_contact_department | Immunology and Inflammation
| Sample_contact_institute | Garvan Institute of Medical Research
| Sample_contact_address | 384 Victoria Street, Darlinghurst
| Sample_contact_city | Sydney
| Sample_contact_state | NSW
| Sample_contact_zip/postal_code | 2010
| Sample_contact_country | Australia
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM422nnn/GSM422298/suppl/GSM422298.CEL.gz
| Sample_series_id | GSE17186
| Sample_data_row_count | 54675
| |
|
GSM422299 | GPL570 |
|
Cord blood CD21lo transitional B cells
|
Cord blood CD21lo transitional B cells
|
tissue: cord blood
b-cell subset: CD20+CD10+CD27-CD21lo
|
Sample pooled from 2 cord blood donors.
|
Sample_geo_accession | GSM422299
| Sample_status | Public on Mar 31 2010
| Sample_submission_date | Jun 25 2009
| Sample_last_update_date | Mar 31 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA extracted as per Trizol protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | According to Affymetrix Hu133Plus2 labelling protocol
| Sample_hyb_protocol | According to Affymetrix Hu133Plus2 hybridisation protocol
| Sample_scan_protocol | According to Affymetrix GCOS version 1.4
| Sample_data_processing | Analysed in GeneSpring Software version 7.3.1.
| Sample_data_processing | Normalisation:
| Sample_data_processing | 1. Per Gene: normalised to media with cut off value 5 in raw signal.
| Sample_platform_id | GPL570
| Sample_contact_name | Santi,,Suryani
| Sample_contact_email | s.suryani@garvan.org.au
| Sample_contact_department | Immunology and Inflammation
| Sample_contact_institute | Garvan Institute of Medical Research
| Sample_contact_address | 384 Victoria Street, Darlinghurst
| Sample_contact_city | Sydney
| Sample_contact_state | NSW
| Sample_contact_zip/postal_code | 2010
| Sample_contact_country | Australia
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM422nnn/GSM422299/suppl/GSM422299.CEL.gz
| Sample_series_id | GSE17186
| Sample_data_row_count | 54675
| |
|
GSM422300 | GPL570 |
|
Cord blood CD21hi transitional B cells
|
Cord blood CD21hi transitional B cells
|
tissue: cord blood
b-cell subset: CD20+CD10+CD27-CD21hi
|
Sample pooled from 2 cord blood donors.
|
Sample_geo_accession | GSM422300
| Sample_status | Public on Mar 31 2010
| Sample_submission_date | Jun 25 2009
| Sample_last_update_date | Mar 31 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA extracted as per Trizol protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | According to Affymetrix Hu133Plus2 labelling protocol
| Sample_hyb_protocol | According to Affymetrix Hu133Plus2 hybridisation protocol
| Sample_scan_protocol | According to Affymetrix GCOS version 1.4
| Sample_data_processing | Analysed in GeneSpring Software version 7.3.1.
| Sample_data_processing | Normalisation:
| Sample_data_processing | 1. Per Gene: normalised to media with cut off value 5 in raw signal.
| Sample_platform_id | GPL570
| Sample_contact_name | Santi,,Suryani
| Sample_contact_email | s.suryani@garvan.org.au
| Sample_contact_department | Immunology and Inflammation
| Sample_contact_institute | Garvan Institute of Medical Research
| Sample_contact_address | 384 Victoria Street, Darlinghurst
| Sample_contact_city | Sydney
| Sample_contact_state | NSW
| Sample_contact_zip/postal_code | 2010
| Sample_contact_country | Australia
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM422nnn/GSM422300/suppl/GSM422300.CEL.gz
| Sample_series_id | GSE17186
| Sample_data_row_count | 54675
| |
|
GSM422301 | GPL570 |
|
Cord blood naive B cells, rep2
|
Cord blood naive B cells
|
tissue: cord blood
b-cell subset: CD20+CD10-CD27-
|
Sample pooled from 3 cord blood donors.
|
Sample_geo_accession | GSM422301
| Sample_status | Public on Mar 31 2010
| Sample_submission_date | Jun 25 2009
| Sample_last_update_date | Mar 31 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA extracted as per Trizol protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | According to Affymetrix Hu133Plus2 labelling protocol
| Sample_hyb_protocol | According to Affymetrix Hu133Plus2 hybridisation protocol
| Sample_scan_protocol | According to Affymetrix GCOS version 1.4
| Sample_data_processing | Analysed in GeneSpring Software version 7.3.1.
| Sample_data_processing | Normalisation:
| Sample_data_processing | 1. Per Gene: normalised to media with cut off value 5 in raw signal.
| Sample_platform_id | GPL570
| Sample_contact_name | Santi,,Suryani
| Sample_contact_email | s.suryani@garvan.org.au
| Sample_contact_department | Immunology and Inflammation
| Sample_contact_institute | Garvan Institute of Medical Research
| Sample_contact_address | 384 Victoria Street, Darlinghurst
| Sample_contact_city | Sydney
| Sample_contact_state | NSW
| Sample_contact_zip/postal_code | 2010
| Sample_contact_country | Australia
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM422nnn/GSM422301/suppl/GSM422301.CEL.gz
| Sample_series_id | GSE17186
| Sample_data_row_count | 54675
| |
|
GSM422302 | GPL570 |
|
Cord blood CD21lo transitional B cells, rep2
|
Cord blood CD21lo transitional B cells
|
tissue: cord blood
b-cell subset: CD20+CD10+CD27-CD21lo
|
Sample pooled from 3 cord blood donors.
|
Sample_geo_accession | GSM422302
| Sample_status | Public on Mar 31 2010
| Sample_submission_date | Jun 25 2009
| Sample_last_update_date | Mar 31 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA extracted as per Trizol protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | According to Affymetrix Hu133Plus2 labelling protocol
| Sample_hyb_protocol | According to Affymetrix Hu133Plus2 hybridisation protocol
| Sample_scan_protocol | According to Affymetrix GCOS version 1.4
| Sample_data_processing | Analysed in GeneSpring Software version 7.3.1.
| Sample_data_processing | Normalisation:
| Sample_data_processing | 1. Per Gene: normalised to media with cut off value 5 in raw signal.
| Sample_platform_id | GPL570
| Sample_contact_name | Santi,,Suryani
| Sample_contact_email | s.suryani@garvan.org.au
| Sample_contact_department | Immunology and Inflammation
| Sample_contact_institute | Garvan Institute of Medical Research
| Sample_contact_address | 384 Victoria Street, Darlinghurst
| Sample_contact_city | Sydney
| Sample_contact_state | NSW
| Sample_contact_zip/postal_code | 2010
| Sample_contact_country | Australia
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM422nnn/GSM422302/suppl/GSM422302.CEL.gz
| Sample_series_id | GSE17186
| Sample_data_row_count | 54675
| |
|
GSM422303 | GPL570 |
|
Cord blood CD21hi transitional B cells, rep2
|
Cord blood CD21hi transitional B cells
|
tissue: cord blood
b-cell subset: CD20+CD10+CD27-CD21hi
|
Sample pooled from 3 cord blood donors.
|
Sample_geo_accession | GSM422303
| Sample_status | Public on Mar 31 2010
| Sample_submission_date | Jun 25 2009
| Sample_last_update_date | Mar 31 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA extracted as per Trizol protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | According to Affymetrix Hu133Plus2 labelling protocol
| Sample_hyb_protocol | According to Affymetrix Hu133Plus2 hybridisation protocol
| Sample_scan_protocol | According to Affymetrix GCOS version 1.4
| Sample_data_processing | Analysed in GeneSpring Software version 7.3.1.
| Sample_data_processing | Normalisation:
| Sample_data_processing | 1. Per Gene: normalised to media with cut off value 5 in raw signal.
| Sample_platform_id | GPL570
| Sample_contact_name | Santi,,Suryani
| Sample_contact_email | s.suryani@garvan.org.au
| Sample_contact_department | Immunology and Inflammation
| Sample_contact_institute | Garvan Institute of Medical Research
| Sample_contact_address | 384 Victoria Street, Darlinghurst
| Sample_contact_city | Sydney
| Sample_contact_state | NSW
| Sample_contact_zip/postal_code | 2010
| Sample_contact_country | Australia
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM422nnn/GSM422303/suppl/GSM422303.CEL.gz
| Sample_series_id | GSE17186
| Sample_data_row_count | 54675
| |
|
GSM422304 | GPL570 |
|
Human memory B cells unstimulated, rep2
|
memory B cell
|
tissue: blood
cell type: PBMC
b-cell subset: CD20+CD10-CD27+
|
Sample pooled from 2 healthy blood donors.
|
Sample_geo_accession | GSM422304
| Sample_status | Public on Mar 31 2010
| Sample_submission_date | Jun 25 2009
| Sample_last_update_date | Mar 31 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA extracted as per Trizol protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | According to Affymetrix Hu133Plus2 labelling protocol
| Sample_hyb_protocol | According to Affymetrix Hu133Plus2 hybridisation protocol
| Sample_scan_protocol | According to Affymetrix GCOS version 1.4
| Sample_data_processing | Analysed in GeneSpring Software version 7.3.1.
| Sample_data_processing | Normalisation:
| Sample_data_processing | 1. Per Gene: normalised to media with cut off value 5 in raw signal.
| Sample_platform_id | GPL570
| Sample_contact_name | Santi,,Suryani
| Sample_contact_email | s.suryani@garvan.org.au
| Sample_contact_department | Immunology and Inflammation
| Sample_contact_institute | Garvan Institute of Medical Research
| Sample_contact_address | 384 Victoria Street, Darlinghurst
| Sample_contact_city | Sydney
| Sample_contact_state | NSW
| Sample_contact_zip/postal_code | 2010
| Sample_contact_country | Australia
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM422nnn/GSM422304/suppl/GSM422304.CEL.gz
| Sample_series_id | GSE17186
| Sample_data_row_count | 54675
| |
|
GSM422305 | GPL570 |
|
Human naive B cells unstimulated, rep2
|
naive B cell
|
tissue: blood
cell type: PBMC
b-cell subset: CD20+CD10-CD27-
|
Sample pooled from 2 healthy blood donors.
|
Sample_geo_accession | GSM422305
| Sample_status | Public on Mar 31 2010
| Sample_submission_date | Jun 25 2009
| Sample_last_update_date | Mar 31 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA extracted as per Trizol protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | According to Affymetrix Hu133Plus2 labelling protocol
| Sample_hyb_protocol | According to Affymetrix Hu133Plus2 hybridisation protocol
| Sample_scan_protocol | According to Affymetrix GCOS version 1.4
| Sample_data_processing | Analysed in GeneSpring Software version 7.3.1.
| Sample_data_processing | Normalisation:
| Sample_data_processing | 1. Per Gene: normalised to media with cut off value 5 in raw signal.
| Sample_platform_id | GPL570
| Sample_contact_name | Santi,,Suryani
| Sample_contact_email | s.suryani@garvan.org.au
| Sample_contact_department | Immunology and Inflammation
| Sample_contact_institute | Garvan Institute of Medical Research
| Sample_contact_address | 384 Victoria Street, Darlinghurst
| Sample_contact_city | Sydney
| Sample_contact_state | NSW
| Sample_contact_zip/postal_code | 2010
| Sample_contact_country | Australia
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM422nnn/GSM422305/suppl/GSM422305.CEL.gz
| Sample_series_id | GSE17186
| Sample_data_row_count | 54675
| |
|
GSM422306 | GPL570 |
|
Human CD21lo transitional B cells unstimulated, rep2
|
CD21lo transitional B cells
|
tissue: blood
cell type: PBMC
b-cell subset: CD20+CD10+CD27-CD21lo
|
Sample pooled from 2 healthy blood donors.
|
Sample_geo_accession | GSM422306
| Sample_status | Public on Mar 31 2010
| Sample_submission_date | Jun 25 2009
| Sample_last_update_date | Mar 31 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA extracted as per Trizol protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | According to Affymetrix Hu133Plus2 labelling protocol
| Sample_hyb_protocol | According to Affymetrix Hu133Plus2 hybridisation protocol
| Sample_scan_protocol | According to Affymetrix GCOS version 1.4
| Sample_data_processing | Analysed in GeneSpring Software version 7.3.1.
| Sample_data_processing | Normalisation:
| Sample_data_processing | 1. Per Gene: normalised to media with cut off value 5 in raw signal.
| Sample_platform_id | GPL570
| Sample_contact_name | Santi,,Suryani
| Sample_contact_email | s.suryani@garvan.org.au
| Sample_contact_department | Immunology and Inflammation
| Sample_contact_institute | Garvan Institute of Medical Research
| Sample_contact_address | 384 Victoria Street, Darlinghurst
| Sample_contact_city | Sydney
| Sample_contact_state | NSW
| Sample_contact_zip/postal_code | 2010
| Sample_contact_country | Australia
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM422nnn/GSM422306/suppl/GSM422306.CEL.gz
| Sample_series_id | GSE17186
| Sample_data_row_count | 54675
| |
|
GSM422307 | GPL570 |
|
Human CD21hi transitional B cells unstimulated, rep2
|
CD21hi transitional B cells
|
tissue: blood
cell type: PBMC
b-cell subset: CD20+CD10+CD27-CD21hi
|
Sample pooled from 2 healthy blood donors.
|
Sample_geo_accession | GSM422307
| Sample_status | Public on Mar 31 2010
| Sample_submission_date | Jun 25 2009
| Sample_last_update_date | Mar 31 2010
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | RNA extracted as per Trizol protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | According to Affymetrix Hu133Plus2 labelling protocol
| Sample_hyb_protocol | According to Affymetrix Hu133Plus2 hybridisation protocol
| Sample_scan_protocol | According to Affymetrix GCOS version 1.4
| Sample_data_processing | Analysed in GeneSpring Software version 7.3.1.
| Sample_data_processing | Normalisation:
| Sample_data_processing | 1. Per Gene: normalised to media with cut off value 5 in raw signal.
| Sample_platform_id | GPL570
| Sample_contact_name | Santi,,Suryani
| Sample_contact_email | s.suryani@garvan.org.au
| Sample_contact_department | Immunology and Inflammation
| Sample_contact_institute | Garvan Institute of Medical Research
| Sample_contact_address | 384 Victoria Street, Darlinghurst
| Sample_contact_city | Sydney
| Sample_contact_state | NSW
| Sample_contact_zip/postal_code | 2010
| Sample_contact_country | Australia
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM422nnn/GSM422307/suppl/GSM422307.CEL.gz
| Sample_series_id | GSE17186
| Sample_data_row_count | 54675
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Make groups for comparisons ![](/q11.jpeg) |
(2 groups will be compared at a time) |
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Select GSMs and click on "Add groups" |
Enter the group name here: |
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