Search results for the GEO ID: GSE17407  |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM434707 | GPL570 |
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MM.1S cells cultured with pDCs
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Human
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cell line: MM.1S
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Affymetrix HG-U133A plus 2.0 gene expression data from multiple myeloma MM.1S cells cultured with pDCs
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| Sample_geo_accession | GSM434707
| | Sample_status | Public on Jul 31 2009
| | Sample_submission_date | Jul 29 2009
| | Sample_last_update_date | Jul 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from ~2 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, ~2 microg of cRNA were hybridized for 16 hr at 45C on Human Genome 133 plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data was MAS5 algorithm from affymetrix
| | Sample_platform_id | GPL570
| | Sample_contact_name | BIDMC ,,Genomics
| | Sample_contact_email | mbhasin@bidmc.harvard.edu
| | Sample_contact_phone | 617 735 2509
| | Sample_contact_fax | 6177352510
| | Sample_contact_institute | Beth Israel Deaconess Medical Center
| | Sample_contact_address | 330 Brookline Avenue RN 380F
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02115
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM434nnn/GSM434707/suppl/GSM434707.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM434nnn/GSM434707/suppl/GSM434707.CHP.gz
| | Sample_series_id | GSE17407
| | Sample_data_row_count | 54675
| | |
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GSM434708 | GPL570 |
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MM.1S cells cultured alone
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Human
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cell line: MM.1S
|
Affymetrix HG-U133A plus 2.0 gene expression data from multiple myeloma MM.1S cells cultured alone
|
| Sample_geo_accession | GSM434708
| | Sample_status | Public on Jul 31 2009
| | Sample_submission_date | Jul 29 2009
| | Sample_last_update_date | Jul 30 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from ~2 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, ~2 microg of cRNA were hybridized for 16 hr at 45C on Human Genome 133 plus 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data was MAS5 algorithm from affymetrix
| | Sample_platform_id | GPL570
| | Sample_contact_name | BIDMC ,,Genomics
| | Sample_contact_email | mbhasin@bidmc.harvard.edu
| | Sample_contact_phone | 617 735 2509
| | Sample_contact_fax | 6177352510
| | Sample_contact_institute | Beth Israel Deaconess Medical Center
| | Sample_contact_address | 330 Brookline Avenue RN 380F
| | Sample_contact_city | Boston
| | Sample_contact_state | MA
| | Sample_contact_zip/postal_code | 02115
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM434nnn/GSM434708/suppl/GSM434708.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM434nnn/GSM434708/suppl/GSM434708.CHP.gz
| | Sample_series_id | GSE17407
| | Sample_data_row_count | 54675
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