Search results for the GEO ID: GSE17511  |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM436516 | GPL1261 |
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Skin_WT_1
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mouse back skin, wild type
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genotype/variation: control
tissue: skin
age: 32 days
sex: male
strain: C57BL6 X DBA2
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no additional information
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| Sample_geo_accession | GSM436516
| | Sample_status | Public on Mar 22 2010
| | Sample_submission_date | Aug 05 2009
| | Sample_last_update_date | Mar 22 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted with Trizol followed by RNAeasy columns (Qiagen) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse Genome Array, according to Affymetrix protocol.
| | Sample_scan_protocol | GeneChips were scanned using GeneChip Scanner 3000 7G (Affymetrix) and GCOS software
| | Sample_data_processing | The data were analyzed with R/Bioconductor. Data were normalized with RMA.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Manuel,,Navarro
| | Sample_contact_email | manuel.navarro@ciemat.es
| | Sample_contact_department | Epithelial Biomedicine
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Av. Complutense 22
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM436nnn/GSM436516/suppl/GSM436516.CEL.gz
| | Sample_series_id | GSE17511
| | Sample_data_row_count | 45101
| | |
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GSM436517 | GPL1261 |
|
Skin_WT_2
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mouse back skin, wild type
|
genotype/variation: control
tissue: skin
age: 32 days
sex: male
strain: C57BL6 X DBA2
|
no additional information
|
| Sample_geo_accession | GSM436517
| | Sample_status | Public on Mar 22 2010
| | Sample_submission_date | Aug 05 2009
| | Sample_last_update_date | Mar 22 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted with Trizol followed by RNAeasy columns (Qiagen) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse Genome Array, according to Affymetrix protocol.
| | Sample_scan_protocol | GeneChips were scanned using GeneChip Scanner 3000 7G (Affymetrix) and GCOS software
| | Sample_data_processing | The data were analyzed with R/Bioconductor. Data were normalized with RMA.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Manuel,,Navarro
| | Sample_contact_email | manuel.navarro@ciemat.es
| | Sample_contact_department | Epithelial Biomedicine
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Av. Complutense 22
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM436nnn/GSM436517/suppl/GSM436517.CEL.gz
| | Sample_series_id | GSE17511
| | Sample_data_row_count | 45101
| | |
|
GSM436518 | GPL1261 |
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Skin_ K5IKKb_1
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mouse back skin, K5-IKKbeta transgenic
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genotype/variation: K5-IKKbeta transgenic
tissue: skin
age: 32 days
sex: male
strain: C57BL6 X DBA2
|
no additional information
|
| Sample_geo_accession | GSM436518
| | Sample_status | Public on Mar 22 2010
| | Sample_submission_date | Aug 05 2009
| | Sample_last_update_date | Mar 22 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted with Trizol followed by RNAeasy columns (Qiagen) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse Genome Array, according to Affymetrix protocol.
| | Sample_scan_protocol | GeneChips were scanned using GeneChip Scanner 3000 7G (Affymetrix) and GCOS software
| | Sample_data_processing | The data were analyzed with R/Bioconductor. Data were normalized with RMA.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Manuel,,Navarro
| | Sample_contact_email | manuel.navarro@ciemat.es
| | Sample_contact_department | Epithelial Biomedicine
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Av. Complutense 22
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM436nnn/GSM436518/suppl/GSM436518.CEL.gz
| | Sample_series_id | GSE17511
| | Sample_data_row_count | 45101
| | |
|
GSM436519 | GPL1261 |
|
Skin_ K5IKKb_2
|
mouse back skin, K5-IKKbeta transgenic
|
genotype/variation: K5-IKKbeta transgenic
tissue: skin
age: 32 days
sex: male
strain: C57BL6 X DBA2
|
no additional information
|
| Sample_geo_accession | GSM436519
| | Sample_status | Public on Mar 22 2010
| | Sample_submission_date | Aug 05 2009
| | Sample_last_update_date | Mar 22 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted with Trizol followed by RNAeasy columns (Qiagen) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA.
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Mouse Genome Array, according to Affymetrix protocol.
| | Sample_scan_protocol | GeneChips were scanned using GeneChip Scanner 3000 7G (Affymetrix) and GCOS software
| | Sample_data_processing | The data were analyzed with R/Bioconductor. Data were normalized with RMA.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Manuel,,Navarro
| | Sample_contact_email | manuel.navarro@ciemat.es
| | Sample_contact_department | Epithelial Biomedicine
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Av. Complutense 22
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM436nnn/GSM436519/suppl/GSM436519.CEL.gz
| | Sample_series_id | GSE17511
| | Sample_data_row_count | 45101
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