Search results for the GEO ID: GSE17636  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM440189 | GPL570 |
|
wild type cells, rep1
|
breast tumor cells, MDA-MB-436
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cell line: MDA-MB-436
cell type: breast tumor epithelial cells
condition: wildtype
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WT1
|
| Sample_geo_accession | GSM440189
| | Sample_status | Public on Feb 27 2010
| | Sample_submission_date | Aug 13 2009
| | Sample_last_update_date | Aug 13 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | The MDA-MB-436 cells were grown at 37°C in a 5% CO2/95% air atmosphere in RPMI-1640 medium supplemented with 10% FCS, 1% PEST and 5 μg/ml insulin.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_hyb_protocol | Done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_scan_protocol | Done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_data_processing | RMA normalization, done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jeanette,,Nilsson
| | Sample_contact_email | Jeanette.Nilsson@cmb.gu.se
| | Sample_contact_phone | +46317863879
| | Sample_contact_fax | +46317863801
| | Sample_contact_department | Cell and Molecular Biology
| | Sample_contact_institute | Gothenburg University
| | Sample_contact_address | Box 462
| | Sample_contact_city | Gothenburg
| | Sample_contact_state | ---
| | Sample_contact_zip/postal_code | S-405 30
| | Sample_contact_country | Sweden
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM440nnn/GSM440189/suppl/GSM440189.CEL.gz
| | Sample_series_id | GSE17636
| | Sample_data_row_count | 54675
| | |
|
GSM440190 | GPL570 |
|
wild type cells, rep2
|
breast tumor cells, MDA-MB-436
|
cell line: MDA-MB-436
cell type: breast tumor epithelial cells
condition: wildtype
|
WT2
|
| Sample_geo_accession | GSM440190
| | Sample_status | Public on Feb 27 2010
| | Sample_submission_date | Aug 13 2009
| | Sample_last_update_date | Aug 13 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | The MDA-MB-436 cells were grown at 37°C in a 5% CO2/95% air atmosphere in RPMI-1640 medium supplemented with 10% FCS, 1% PEST and 5 μg/ml insulin.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_hyb_protocol | Done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_scan_protocol | Done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_data_processing | RMA normalization, done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jeanette,,Nilsson
| | Sample_contact_email | Jeanette.Nilsson@cmb.gu.se
| | Sample_contact_phone | +46317863879
| | Sample_contact_fax | +46317863801
| | Sample_contact_department | Cell and Molecular Biology
| | Sample_contact_institute | Gothenburg University
| | Sample_contact_address | Box 462
| | Sample_contact_city | Gothenburg
| | Sample_contact_state | ---
| | Sample_contact_zip/postal_code | S-405 30
| | Sample_contact_country | Sweden
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM440nnn/GSM440190/suppl/GSM440190.CEL.gz
| | Sample_series_id | GSE17636
| | Sample_data_row_count | 54675
| | |
|
GSM440191 | GPL570 |
|
wild type cells, rep3
|
breast tumor cells, MDA-MB-436
|
cell line: MDA-MB-436
cell type: breast tumor epithelial cells
condition: wildtype
|
WT3
|
| Sample_geo_accession | GSM440191
| | Sample_status | Public on Feb 27 2010
| | Sample_submission_date | Aug 13 2009
| | Sample_last_update_date | Aug 13 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | The MDA-MB-436 cells were grown at 37°C in a 5% CO2/95% air atmosphere in RPMI-1640 medium supplemented with 10% FCS, 1% PEST and 5 μg/ml insulin.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_hyb_protocol | Done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_scan_protocol | Done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_data_processing | RMA normalization, done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jeanette,,Nilsson
| | Sample_contact_email | Jeanette.Nilsson@cmb.gu.se
| | Sample_contact_phone | +46317863879
| | Sample_contact_fax | +46317863801
| | Sample_contact_department | Cell and Molecular Biology
| | Sample_contact_institute | Gothenburg University
| | Sample_contact_address | Box 462
| | Sample_contact_city | Gothenburg
| | Sample_contact_state | ---
| | Sample_contact_zip/postal_code | S-405 30
| | Sample_contact_country | Sweden
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM440nnn/GSM440191/suppl/GSM440191.CEL.gz
| | Sample_series_id | GSE17636
| | Sample_data_row_count | 54675
| | |
|
GSM440192 | GPL570 |
|
NF1-C2S transfected cells, rep1
|
breast tumor cells, MDA-MB-436, transfected with NF1-C2S
|
cell line: MDA-MB-436
cell type: breast tumor epithelial cells
condition: overexpressing NF-C2
|
NF1C2S1
|
| Sample_geo_accession | GSM440192
| | Sample_status | Public on Feb 27 2010
| | Sample_submission_date | Aug 13 2009
| | Sample_last_update_date | Aug 13 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | The MDA-MB-436 cells were grown at 37°C in a 5% CO2/95% air atmosphere in RPMI-1640 medium supplemented with 10% FCS, 1% PEST and 5 μg/ml insulin.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_hyb_protocol | Done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_scan_protocol | Done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_data_processing | RMA normalization, done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jeanette,,Nilsson
| | Sample_contact_email | Jeanette.Nilsson@cmb.gu.se
| | Sample_contact_phone | +46317863879
| | Sample_contact_fax | +46317863801
| | Sample_contact_department | Cell and Molecular Biology
| | Sample_contact_institute | Gothenburg University
| | Sample_contact_address | Box 462
| | Sample_contact_city | Gothenburg
| | Sample_contact_state | ---
| | Sample_contact_zip/postal_code | S-405 30
| | Sample_contact_country | Sweden
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM440nnn/GSM440192/suppl/GSM440192.CEL.gz
| | Sample_series_id | GSE17636
| | Sample_data_row_count | 54675
| | |
|
GSM440193 | GPL570 |
|
NF1-C2S transfected cells, rep2
|
breast tumor cells, MDA-MB-436, transfected with NF1-C2S
|
cell line: MDA-MB-436
cell type: breast tumor epithelial cells
condition: overexpressing NF-C2
|
NF1C2S2
|
| Sample_geo_accession | GSM440193
| | Sample_status | Public on Feb 27 2010
| | Sample_submission_date | Aug 13 2009
| | Sample_last_update_date | Aug 13 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | The MDA-MB-436 cells were grown at 37°C in a 5% CO2/95% air atmosphere in RPMI-1640 medium supplemented with 10% FCS, 1% PEST and 5 μg/ml insulin.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_hyb_protocol | Done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_scan_protocol | Done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_data_processing | RMA normalization, done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jeanette,,Nilsson
| | Sample_contact_email | Jeanette.Nilsson@cmb.gu.se
| | Sample_contact_phone | +46317863879
| | Sample_contact_fax | +46317863801
| | Sample_contact_department | Cell and Molecular Biology
| | Sample_contact_institute | Gothenburg University
| | Sample_contact_address | Box 462
| | Sample_contact_city | Gothenburg
| | Sample_contact_state | ---
| | Sample_contact_zip/postal_code | S-405 30
| | Sample_contact_country | Sweden
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM440nnn/GSM440193/suppl/GSM440193.CEL.gz
| | Sample_series_id | GSE17636
| | Sample_data_row_count | 54675
| | |
|
GSM440194 | GPL570 |
|
NF1-C2S transfected cells, rep3
|
breast tumor cells, MDA-MB-436, transfected with NF1-C2S
|
cell line: MDA-MB-436
cell type: breast tumor epithelial cells
condition: overexpressing NF-C2
|
NF1C2S3
|
| Sample_geo_accession | GSM440194
| | Sample_status | Public on Feb 27 2010
| | Sample_submission_date | Aug 13 2009
| | Sample_last_update_date | Aug 13 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | The MDA-MB-436 cells were grown at 37°C in a 5% CO2/95% air atmosphere in RPMI-1640 medium supplemented with 10% FCS, 1% PEST and 5 μg/ml insulin.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_hyb_protocol | Done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_scan_protocol | Done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_data_processing | RMA normalization, done by the SCIBLU Micoarray Resourse Center (MARC), Lund University, Sweden.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Jeanette,,Nilsson
| | Sample_contact_email | Jeanette.Nilsson@cmb.gu.se
| | Sample_contact_phone | +46317863879
| | Sample_contact_fax | +46317863801
| | Sample_contact_department | Cell and Molecular Biology
| | Sample_contact_institute | Gothenburg University
| | Sample_contact_address | Box 462
| | Sample_contact_city | Gothenburg
| | Sample_contact_state | ---
| | Sample_contact_zip/postal_code | S-405 30
| | Sample_contact_country | Sweden
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM440nnn/GSM440194/suppl/GSM440194.CEL.gz
| | Sample_series_id | GSE17636
| | Sample_data_row_count | 54675
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