Search results for the GEO ID: GSE17985  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM450315 | GPL1261 |
|
WT (24_2)
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Fully grown germinal vesicle-intact oocyte, wild-type
|
strain: 129/C57BL6
gender: female
tissue: oocyte
genotype: wild-type
|
Gene expression data from wild-type oocytes.
|
| Sample_geo_accession | GSM450315
| | Sample_status | Public on Mar 05 2010
| | Sample_submission_date | Sep 04 2009
| | Sample_last_update_date | Mar 05 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Germinal vesicle-intact, fully grown oocytes were collected from eCG-primed wild-type or Dicer-deficient female mice and freed of attached cumulus cells by pipetting.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA isolation using the Arcturus PicoPure RNA Isolation Kit followed by linear 2-round amplification following the Affymetrix GeneChip Eukaryotic Small Sample Target Labeling Assay Version II protocol. Twenty oocytes per mouse were used for RNA extraction.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Enzo BioArray High Yield RNA Transcript Labeling Kit.
| | Sample_hyb_protocol | Penn Microarray Facility.
| | Sample_scan_protocol | Penn Microarray Facility.
| | Sample_data_processing | CEL files were processed using RMA in Partek Genomics Suite using default values.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Paula,,Stein
| | Sample_contact_email | steinpau@sas.upenn.edu
| | Sample_contact_phone | 215-898-7806
| | Sample_contact_fax | 215-898-8780
| | Sample_contact_laboratory | Richard Schultz
| | Sample_contact_department | Biology
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 433 S. University Avenue
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104-6018
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM450nnn/GSM450315/suppl/GSM450315.CEL.gz
| | Sample_series_id | GSE17985
| | Sample_data_row_count | 45101
| | |
|
GSM450316 | GPL1261 |
|
WT (27_5)
|
Fully grown germinal vesicle-intact oocyte, wild-type
|
strain: 129/C57BL6
gender: female
tissue: oocyte
genotype: wild-type
|
Gene expression data from wild-type oocytes.
|
| Sample_geo_accession | GSM450316
| | Sample_status | Public on Mar 05 2010
| | Sample_submission_date | Sep 04 2009
| | Sample_last_update_date | Mar 05 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Germinal vesicle-intact, fully grown oocytes were collected from eCG-primed wild-type or Dicer-deficient female mice and freed of attached cumulus cells by pipetting.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA isolation using the Arcturus PicoPure RNA Isolation Kit followed by linear 2-round amplification following the Affymetrix GeneChip Eukaryotic Small Sample Target Labeling Assay Version II protocol. Twenty oocytes per mouse were used for RNA extraction.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Enzo BioArray High Yield RNA Transcript Labeling Kit.
| | Sample_hyb_protocol | Penn Microarray Facility.
| | Sample_scan_protocol | Penn Microarray Facility.
| | Sample_data_processing | CEL files were processed using RMA in Partek Genomics Suite using default values.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Paula,,Stein
| | Sample_contact_email | steinpau@sas.upenn.edu
| | Sample_contact_phone | 215-898-7806
| | Sample_contact_fax | 215-898-8780
| | Sample_contact_laboratory | Richard Schultz
| | Sample_contact_department | Biology
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 433 S. University Avenue
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104-6018
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM450nnn/GSM450316/suppl/GSM450316.CEL.gz
| | Sample_series_id | GSE17985
| | Sample_data_row_count | 45101
| | |
|
GSM450317 | GPL1261 |
|
WT (28_1)
|
Fully grown germinal vesicle-intact oocyte, wild-type
|
strain: 129/C57BL6
gender: female
tissue: oocyte
genotype: wild-type
|
Gene expression data from wild-type oocytes.
|
| Sample_geo_accession | GSM450317
| | Sample_status | Public on Mar 05 2010
| | Sample_submission_date | Sep 04 2009
| | Sample_last_update_date | Mar 05 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Germinal vesicle-intact, fully grown oocytes were collected from eCG-primed wild-type or Dicer-deficient female mice and freed of attached cumulus cells by pipetting.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA isolation using the Arcturus PicoPure RNA Isolation Kit followed by linear 2-round amplification following the Affymetrix GeneChip Eukaryotic Small Sample Target Labeling Assay Version II protocol. Twenty oocytes per mouse were used for RNA extraction.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Enzo BioArray High Yield RNA Transcript Labeling Kit.
| | Sample_hyb_protocol | Penn Microarray Facility.
| | Sample_scan_protocol | Penn Microarray Facility.
| | Sample_data_processing | CEL files were processed using RMA in Partek Genomics Suite using default values.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Paula,,Stein
| | Sample_contact_email | steinpau@sas.upenn.edu
| | Sample_contact_phone | 215-898-7806
| | Sample_contact_fax | 215-898-8780
| | Sample_contact_laboratory | Richard Schultz
| | Sample_contact_department | Biology
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 433 S. University Avenue
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104-6018
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM450nnn/GSM450317/suppl/GSM450317.CEL.gz
| | Sample_series_id | GSE17985
| | Sample_data_row_count | 45101
| | |
|
GSM450318 | GPL1261 |
|
WT (28_2)
|
Fully grown germinal vesicle-intact oocyte, wild-type
|
strain: 129/C57BL6
gender: female
tissue: oocyte
genotype: wild-type
|
Gene expression data from wild-type oocytes.
|
| Sample_geo_accession | GSM450318
| | Sample_status | Public on Mar 05 2010
| | Sample_submission_date | Sep 04 2009
| | Sample_last_update_date | Mar 05 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Germinal vesicle-intact, fully grown oocytes were collected from eCG-primed wild-type or Dicer-deficient female mice and freed of attached cumulus cells by pipetting.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA isolation using the Arcturus PicoPure RNA Isolation Kit followed by linear 2-round amplification following the Affymetrix GeneChip Eukaryotic Small Sample Target Labeling Assay Version II protocol. Twenty oocytes per mouse were used for RNA extraction.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Enzo BioArray High Yield RNA Transcript Labeling Kit.
| | Sample_hyb_protocol | Penn Microarray Facility.
| | Sample_scan_protocol | Penn Microarray Facility.
| | Sample_data_processing | CEL files were processed using RMA in Partek Genomics Suite using default values.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Paula,,Stein
| | Sample_contact_email | steinpau@sas.upenn.edu
| | Sample_contact_phone | 215-898-7806
| | Sample_contact_fax | 215-898-8780
| | Sample_contact_laboratory | Richard Schultz
| | Sample_contact_department | Biology
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 433 S. University Avenue
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104-6018
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM450nnn/GSM450318/suppl/GSM450318.CEL.gz
| | Sample_series_id | GSE17985
| | Sample_data_row_count | 45101
| | |
|
GSM450319 | GPL1261 |
|
DicerKO (21_4)
|
Fully grown germinal vesicle-intact oocyte, Dicer-deficient
|
strain: 129/C57BL6
gender: female
tissue: oocyte
genotype: Dicer knockout
|
Gene expression data from Dicer-deficient oocytes.
|
| Sample_geo_accession | GSM450319
| | Sample_status | Public on Mar 05 2010
| | Sample_submission_date | Sep 04 2009
| | Sample_last_update_date | Mar 05 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Germinal vesicle-intact, fully grown oocytes were collected from eCG-primed wild-type or Dicer-deficient female mice and freed of attached cumulus cells by pipetting.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA isolation using the Arcturus PicoPure RNA Isolation Kit followed by linear 2-round amplification following the Affymetrix GeneChip Eukaryotic Small Sample Target Labeling Assay Version II protocol. Twenty oocytes per mouse were used for RNA extraction.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Enzo BioArray High Yield RNA Transcript Labeling Kit.
| | Sample_hyb_protocol | Penn Microarray Facility.
| | Sample_scan_protocol | Penn Microarray Facility.
| | Sample_data_processing | CEL files were processed using RMA in Partek Genomics Suite using default values.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Paula,,Stein
| | Sample_contact_email | steinpau@sas.upenn.edu
| | Sample_contact_phone | 215-898-7806
| | Sample_contact_fax | 215-898-8780
| | Sample_contact_laboratory | Richard Schultz
| | Sample_contact_department | Biology
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 433 S. University Avenue
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104-6018
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM450nnn/GSM450319/suppl/GSM450319.CEL.gz
| | Sample_series_id | GSE17985
| | Sample_data_row_count | 45101
| | |
|
GSM450320 | GPL1261 |
|
DicerKO (24_1)
|
Fully grown germinal vesicle-intact oocyte, Dicer-deficient
|
strain: 129/C57BL6
gender: female
tissue: oocyte
genotype: Dicer knockout
|
Gene expression data from Dicer-deficient oocytes.
|
| Sample_geo_accession | GSM450320
| | Sample_status | Public on Mar 05 2010
| | Sample_submission_date | Sep 04 2009
| | Sample_last_update_date | Mar 05 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Germinal vesicle-intact, fully grown oocytes were collected from eCG-primed wild-type or Dicer-deficient female mice and freed of attached cumulus cells by pipetting.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA isolation using the Arcturus PicoPure RNA Isolation Kit followed by linear 2-round amplification following the Affymetrix GeneChip Eukaryotic Small Sample Target Labeling Assay Version II protocol. Twenty oocytes per mouse were used for RNA extraction.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Enzo BioArray High Yield RNA Transcript Labeling Kit.
| | Sample_hyb_protocol | Penn Microarray Facility.
| | Sample_scan_protocol | Penn Microarray Facility.
| | Sample_data_processing | CEL files were processed using RMA in Partek Genomics Suite using default values.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Paula,,Stein
| | Sample_contact_email | steinpau@sas.upenn.edu
| | Sample_contact_phone | 215-898-7806
| | Sample_contact_fax | 215-898-8780
| | Sample_contact_laboratory | Richard Schultz
| | Sample_contact_department | Biology
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 433 S. University Avenue
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104-6018
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM450nnn/GSM450320/suppl/GSM450320.CEL.gz
| | Sample_series_id | GSE17985
| | Sample_data_row_count | 45101
| | |
|
GSM450321 | GPL1261 |
|
DicerKO (25_10)
|
Fully grown germinal vesicle-intact oocyte, Dicer-deficient
|
strain: 129/C57BL6
gender: female
tissue: oocyte
genotype: Dicer knockout
|
Gene expression data from Dicer-deficient oocytes.
|
| Sample_geo_accession | GSM450321
| | Sample_status | Public on Mar 05 2010
| | Sample_submission_date | Sep 04 2009
| | Sample_last_update_date | Mar 05 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Germinal vesicle-intact, fully grown oocytes were collected from eCG-primed wild-type or Dicer-deficient female mice and freed of attached cumulus cells by pipetting.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA isolation using the Arcturus PicoPure RNA Isolation Kit followed by linear 2-round amplification following the Affymetrix GeneChip Eukaryotic Small Sample Target Labeling Assay Version II protocol. Twenty oocytes per mouse were used for RNA extraction.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Enzo BioArray High Yield RNA Transcript Labeling Kit.
| | Sample_hyb_protocol | Penn Microarray Facility.
| | Sample_scan_protocol | Penn Microarray Facility.
| | Sample_data_processing | CEL files were processed using RMA in Partek Genomics Suite using default values.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Paula,,Stein
| | Sample_contact_email | steinpau@sas.upenn.edu
| | Sample_contact_phone | 215-898-7806
| | Sample_contact_fax | 215-898-8780
| | Sample_contact_laboratory | Richard Schultz
| | Sample_contact_department | Biology
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 433 S. University Avenue
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104-6018
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM450nnn/GSM450321/suppl/GSM450321.CEL.gz
| | Sample_series_id | GSE17985
| | Sample_data_row_count | 45101
| | |
|
GSM450322 | GPL1261 |
|
DicerKO (27_4)
|
Fully grown germinal vesicle-intact oocyte, Dicer-deficient
|
strain: 129/C57BL6
gender: female
tissue: oocyte
genotype: Dicer knockout
|
Gene expression data from Dicer-deficient oocytes.
|
| Sample_geo_accession | GSM450322
| | Sample_status | Public on Mar 05 2010
| | Sample_submission_date | Sep 04 2009
| | Sample_last_update_date | Mar 05 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Germinal vesicle-intact, fully grown oocytes were collected from eCG-primed wild-type or Dicer-deficient female mice and freed of attached cumulus cells by pipetting.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA isolation using the Arcturus PicoPure RNA Isolation Kit followed by linear 2-round amplification following the Affymetrix GeneChip Eukaryotic Small Sample Target Labeling Assay Version II protocol. Twenty oocytes per mouse were used for RNA extraction.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Enzo BioArray High Yield RNA Transcript Labeling Kit.
| | Sample_hyb_protocol | Penn Microarray Facility.
| | Sample_scan_protocol | Penn Microarray Facility.
| | Sample_data_processing | CEL files were processed using RMA in Partek Genomics Suite using default values.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Paula,,Stein
| | Sample_contact_email | steinpau@sas.upenn.edu
| | Sample_contact_phone | 215-898-7806
| | Sample_contact_fax | 215-898-8780
| | Sample_contact_laboratory | Richard Schultz
| | Sample_contact_department | Biology
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 433 S. University Avenue
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104-6018
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM450nnn/GSM450322/suppl/GSM450322.CEL.gz
| | Sample_series_id | GSE17985
| | Sample_data_row_count | 45101
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