Search results for the GEO ID: GSE18055  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM451395 | GPL1355 |
|
Anterior Cingulate Cortex Cocaine Self-administration Vehicle treatment replicate 1
|
Anterior Cingulate Cortex_Vehicle
|
gender: Male
strain: Wistar
tissue: Anterior Cingulate Cortex
treatment: Vehicle
|
n/a
|
| Sample_geo_accession | GSM451395
| | Sample_status | Public on Jan 21 2010
| | Sample_submission_date | Sep 10 2009
| | Sample_last_update_date | Jan 21 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rats were sacrificed 2 h after the 4th daily cocaine self-administration session by an overdose of pentobarbital (100 mg/kg, i.p.) and their brains were removed.The anterior cingulate cortex and the nucleus accumbens were dissected. Samples from two rats were pooled.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted according to the procedure described by Chomczynski and Sacchi, 1987.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 µg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45°C on GeneChip Rat Genome 230 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data were processed using the Affymetrix GeneChip Operating Software (GCOS v1.4; Microarray Suite (MAS 5.0) algorithm).
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Doulaye,,Dembele
| | Sample_contact_email | doulaye@igbmc.fr
| | Sample_contact_phone | +33 3 88 65 35 28
| | Sample_contact_department | Biopuces
| | Sample_contact_institute | IGBMC
| | Sample_contact_address | 1 rue Laurent Fries
| | Sample_contact_city | Illkirch
| | Sample_contact_zip/postal_code | 67400
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451395/suppl/GSM451395_JZR_01_230_2.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451395/suppl/GSM451395_JZR_01_230_2.CHP.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451395/suppl/GSM451395_JZR_01_230_2.EXP.gz
| | Sample_series_id | GSE18055
| | Sample_data_row_count | 31099
| | |
|
GSM451396 | GPL1355 |
|
Anterior Cingulate Cortex Cocaine Self-administration Vehicle treatment replicate 2
|
Anterior Cingulate Cortex_Vehicle
|
gender: Male
strain: Wistar
tissue: Anterior Cingulate Cortex
treatment: Vehicle
|
n/a
|
| Sample_geo_accession | GSM451396
| | Sample_status | Public on Jan 21 2010
| | Sample_submission_date | Sep 10 2009
| | Sample_last_update_date | Jan 21 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rats were sacrificed 2 h after the 4th daily cocaine self-administration session by an overdose of pentobarbital (100 mg/kg, i.p.) and their brains were removed.The anterior cingulate cortex and the nucleus accumbens were dissected. Samples from two rats were pooled.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted according to the procedure described by Chomczynski and Sacchi, 1987.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 µg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45°C on GeneChip Rat Genome 230 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data were processed using the Affymetrix GeneChip Operating Software (GCOS v1.4; Microarray Suite (MAS 5.0) algorithm).
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Doulaye,,Dembele
| | Sample_contact_email | doulaye@igbmc.fr
| | Sample_contact_phone | +33 3 88 65 35 28
| | Sample_contact_department | Biopuces
| | Sample_contact_institute | IGBMC
| | Sample_contact_address | 1 rue Laurent Fries
| | Sample_contact_city | Illkirch
| | Sample_contact_zip/postal_code | 67400
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451396/suppl/GSM451396_JZR_02_230_2.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451396/suppl/GSM451396_JZR_02_230_2.CHP.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451396/suppl/GSM451396_JZR_02_230_2.EXP.gz
| | Sample_series_id | GSE18055
| | Sample_data_row_count | 31099
| | |
|
GSM451397 | GPL1355 |
|
Anterior Cingulate Cortex Cocaine Self-administration Vehicle treatment replicate 3
|
Anterior Cingulate Cortex_Vehicle
|
gender: Male
strain: Wistar
tissue: Anterior Cingulate Cortex
treatment: Vehicle
|
n/a
|
| Sample_geo_accession | GSM451397
| | Sample_status | Public on Jan 21 2010
| | Sample_submission_date | Sep 10 2009
| | Sample_last_update_date | Jan 21 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rats were sacrificed 2 h after the 4th daily cocaine self-administration session by an overdose of pentobarbital (100 mg/kg, i.p.) and their brains were removed.The anterior cingulate cortex and the nucleus accumbens were dissected. Samples from two rats were pooled.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted according to the procedure described by Chomczynski and Sacchi, 1987.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 µg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45°C on GeneChip Rat Genome 230 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data were processed using the Affymetrix GeneChip Operating Software (GCOS v1.4; Microarray Suite (MAS 5.0) algorithm).
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Doulaye,,Dembele
| | Sample_contact_email | doulaye@igbmc.fr
| | Sample_contact_phone | +33 3 88 65 35 28
| | Sample_contact_department | Biopuces
| | Sample_contact_institute | IGBMC
| | Sample_contact_address | 1 rue Laurent Fries
| | Sample_contact_city | Illkirch
| | Sample_contact_zip/postal_code | 67400
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451397/suppl/GSM451397_JZR_03_230_2.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451397/suppl/GSM451397_JZR_03_230_2.CHP.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451397/suppl/GSM451397_JZR_03_230_2.EXP.gz
| | Sample_series_id | GSE18055
| | Sample_data_row_count | 31099
| | |
|
GSM451398 | GPL1355 |
|
Anterior Cingulate Cortex Cocaine Self-administration TsA treatment replicate 1
|
Anterior Cingulate Cortex_TsA
|
gender: Male
strain: Wistar
tissue: Anterior Cingulate Cortex
treatment: TsA
|
n/a
|
| Sample_geo_accession | GSM451398
| | Sample_status | Public on Jan 21 2010
| | Sample_submission_date | Sep 10 2009
| | Sample_last_update_date | Jan 21 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rats were sacrificed 2 h after the 4th daily cocaine self-administration session by an overdose of pentobarbital (100 mg/kg, i.p.) and their brains were removed.The anterior cingulate cortex and the nucleus accumbens were dissected. Samples from two rats were pooled.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted according to the procedure described by Chomczynski and Sacchi, 1987.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 µg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45°C on GeneChip Rat Genome 230 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data were processed using the Affymetrix GeneChip Operating Software (GCOS v1.4; Microarray Suite (MAS 5.0) algorithm).
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Doulaye,,Dembele
| | Sample_contact_email | doulaye@igbmc.fr
| | Sample_contact_phone | +33 3 88 65 35 28
| | Sample_contact_department | Biopuces
| | Sample_contact_institute | IGBMC
| | Sample_contact_address | 1 rue Laurent Fries
| | Sample_contact_city | Illkirch
| | Sample_contact_zip/postal_code | 67400
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451398/suppl/GSM451398_JZR_04_230_2.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451398/suppl/GSM451398_JZR_04_230_2.CHP.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451398/suppl/GSM451398_JZR_04_230_2.EXP.gz
| | Sample_series_id | GSE18055
| | Sample_data_row_count | 31099
| | |
|
GSM451399 | GPL1355 |
|
Anterior Cingulate Cortex Cocaine Self-administration TsA treatment replicate 2
|
Anterior Cingulate Cortex_TsA
|
gender: Male
strain: Wistar
tissue: Anterior Cingulate Cortex
treatment: TsA
|
n/a
|
| Sample_geo_accession | GSM451399
| | Sample_status | Public on Jan 21 2010
| | Sample_submission_date | Sep 10 2009
| | Sample_last_update_date | Jan 21 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rats were sacrificed 2 h after the 4th daily cocaine self-administration session by an overdose of pentobarbital (100 mg/kg, i.p.) and their brains were removed.The anterior cingulate cortex and the nucleus accumbens were dissected. Samples from two rats were pooled.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted according to the procedure described by Chomczynski and Sacchi, 1987.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 µg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45°C on GeneChip Rat Genome 230 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data were processed using the Affymetrix GeneChip Operating Software (GCOS v1.4; Microarray Suite (MAS 5.0) algorithm).
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Doulaye,,Dembele
| | Sample_contact_email | doulaye@igbmc.fr
| | Sample_contact_phone | +33 3 88 65 35 28
| | Sample_contact_department | Biopuces
| | Sample_contact_institute | IGBMC
| | Sample_contact_address | 1 rue Laurent Fries
| | Sample_contact_city | Illkirch
| | Sample_contact_zip/postal_code | 67400
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451399/suppl/GSM451399_JZR_05_230_2.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451399/suppl/GSM451399_JZR_05_230_2.CHP.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451399/suppl/GSM451399_JZR_05_230_2.EXP.gz
| | Sample_series_id | GSE18055
| | Sample_data_row_count | 31099
| | |
|
GSM451400 | GPL1355 |
|
Anterior Cingulate Cortex Cocaine Self-administration TsA treatment replicate 3
|
Anterior Cingulate Cortex_TsA
|
gender: Male
strain: Wistar
tissue: Anterior Cingulate Cortex
treatment: TsA
|
n/a
|
| Sample_geo_accession | GSM451400
| | Sample_status | Public on Jan 21 2010
| | Sample_submission_date | Sep 10 2009
| | Sample_last_update_date | Jan 21 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rats were sacrificed 2 h after the 4th daily cocaine self-administration session by an overdose of pentobarbital (100 mg/kg, i.p.) and their brains were removed.The anterior cingulate cortex and the nucleus accumbens were dissected. Samples from two rats were pooled.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted according to the procedure described by Chomczynski and Sacchi, 1987.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 µg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45°C on GeneChip Rat Genome 230 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data were processed using the Affymetrix GeneChip Operating Software (GCOS v1.4; Microarray Suite (MAS 5.0) algorithm).
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Doulaye,,Dembele
| | Sample_contact_email | doulaye@igbmc.fr
| | Sample_contact_phone | +33 3 88 65 35 28
| | Sample_contact_department | Biopuces
| | Sample_contact_institute | IGBMC
| | Sample_contact_address | 1 rue Laurent Fries
| | Sample_contact_city | Illkirch
| | Sample_contact_zip/postal_code | 67400
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451400/suppl/GSM451400_JZR_06_230_2.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451400/suppl/GSM451400_JZR_06_230_2.CHP.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451400/suppl/GSM451400_JZR_06_230_2.EXP.gz
| | Sample_series_id | GSE18055
| | Sample_data_row_count | 31099
| | |
|
GSM451401 | GPL1355 |
|
Nucleus Accumbens Cocaine Self-adminitration Vehicle treatment replicate 1
|
Nucleus Accumbens_Vehicle
|
gender: Male
strain: Wistar
tissue: Nucleus Accumbens
treatment: Vehicle
|
n/a
|
| Sample_geo_accession | GSM451401
| | Sample_status | Public on Jan 21 2010
| | Sample_submission_date | Sep 10 2009
| | Sample_last_update_date | Jan 21 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rats were sacrificed 2 h after the 4th daily cocaine self-administration session by an overdose of pentobarbital (100 mg/kg, i.p.) and their brains were removed.The anterior cingulate cortex and the nucleus accumbens were dissected. Samples from two rats were pooled.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted according to the procedure described by Chomczynski and Sacchi, 1987.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 µg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45°C on GeneChip Rat Genome 230 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data were processed using the Affymetrix GeneChip Operating Software (GCOS v1.4; Microarray Suite (MAS 5.0) algorithm).
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Doulaye,,Dembele
| | Sample_contact_email | doulaye@igbmc.fr
| | Sample_contact_phone | +33 3 88 65 35 28
| | Sample_contact_department | Biopuces
| | Sample_contact_institute | IGBMC
| | Sample_contact_address | 1 rue Laurent Fries
| | Sample_contact_city | Illkirch
| | Sample_contact_zip/postal_code | 67400
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451401/suppl/GSM451401_JZR_07_230_2.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451401/suppl/GSM451401_JZR_07_230_2.CHP.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451401/suppl/GSM451401_JZR_07_230_2.EXP.gz
| | Sample_series_id | GSE18055
| | Sample_data_row_count | 31099
| | |
|
GSM451402 | GPL1355 |
|
Nucleus Accumbens Cocaine Self-adminitration Vehicle treatment replicate 2
|
Nucleus Accumbens_Vehicle
|
gender: Male
strain: Wistar
tissue: Nucleus Accumbens
treatment: Vehicle
|
n/a
|
| Sample_geo_accession | GSM451402
| | Sample_status | Public on Jan 21 2010
| | Sample_submission_date | Sep 10 2009
| | Sample_last_update_date | Jan 21 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rats were sacrificed 2 h after the 4th daily cocaine self-administration session by an overdose of pentobarbital (100 mg/kg, i.p.) and their brains were removed.The anterior cingulate cortex and the nucleus accumbens were dissected. Samples from two rats were pooled.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted according to the procedure described by Chomczynski and Sacchi, 1987.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 µg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45°C on GeneChip Rat Genome 230 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data were processed using the Affymetrix GeneChip Operating Software (GCOS v1.4; Microarray Suite (MAS 5.0) algorithm).
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Doulaye,,Dembele
| | Sample_contact_email | doulaye@igbmc.fr
| | Sample_contact_phone | +33 3 88 65 35 28
| | Sample_contact_department | Biopuces
| | Sample_contact_institute | IGBMC
| | Sample_contact_address | 1 rue Laurent Fries
| | Sample_contact_city | Illkirch
| | Sample_contact_zip/postal_code | 67400
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451402/suppl/GSM451402_JZR_08_230_2.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451402/suppl/GSM451402_JZR_08_230_2.CHP.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451402/suppl/GSM451402_JZR_08_230_2.EXP.gz
| | Sample_series_id | GSE18055
| | Sample_data_row_count | 31099
| | |
|
GSM451403 | GPL1355 |
|
Nucleus Accumbens Cocaine Self-adminitration Vehicle treatment replicate 3
|
Nucleus Accumbens_Vehicle
|
gender: Male
strain: Wistar
tissue: Nucleus Accumbens
treatment: Vehicle
|
n/a
|
| Sample_geo_accession | GSM451403
| | Sample_status | Public on Jan 21 2010
| | Sample_submission_date | Sep 10 2009
| | Sample_last_update_date | Jan 21 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rats were sacrificed 2 h after the 4th daily cocaine self-administration session by an overdose of pentobarbital (100 mg/kg, i.p.) and their brains were removed.The anterior cingulate cortex and the nucleus accumbens were dissected. Samples from two rats were pooled.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted according to the procedure described by Chomczynski and Sacchi, 1987.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 µg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45°C on GeneChip Rat Genome 230 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data were processed using the Affymetrix GeneChip Operating Software (GCOS v1.4; Microarray Suite (MAS 5.0) algorithm).
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Doulaye,,Dembele
| | Sample_contact_email | doulaye@igbmc.fr
| | Sample_contact_phone | +33 3 88 65 35 28
| | Sample_contact_department | Biopuces
| | Sample_contact_institute | IGBMC
| | Sample_contact_address | 1 rue Laurent Fries
| | Sample_contact_city | Illkirch
| | Sample_contact_zip/postal_code | 67400
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451403/suppl/GSM451403_JZR_09_230_2.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451403/suppl/GSM451403_JZR_09_230_2.CHP.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451403/suppl/GSM451403_JZR_09_230_2.EXP.gz
| | Sample_series_id | GSE18055
| | Sample_data_row_count | 31099
| | |
|
GSM451404 | GPL1355 |
|
Nucleus Accumbens Cocaine Self-adminitration TsA treatment replicate 1
|
Nucleus Accumbens_TsA
|
gender: Male
strain: Wistar
tissue: Nucleus Accumbens
treatment: TsA
|
n/a
|
| Sample_geo_accession | GSM451404
| | Sample_status | Public on Jan 21 2010
| | Sample_submission_date | Sep 10 2009
| | Sample_last_update_date | Jan 21 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rats were sacrificed 2 h after the 4th daily cocaine self-administration session by an overdose of pentobarbital (100 mg/kg, i.p.) and their brains were removed.The anterior cingulate cortex and the nucleus accumbens were dissected. Samples from two rats were pooled.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted according to the procedure described by Chomczynski and Sacchi, 1987.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 µg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45°C on GeneChip Rat Genome 230 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data were processed using the Affymetrix GeneChip Operating Software (GCOS v1.4; Microarray Suite (MAS 5.0) algorithm).
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Doulaye,,Dembele
| | Sample_contact_email | doulaye@igbmc.fr
| | Sample_contact_phone | +33 3 88 65 35 28
| | Sample_contact_department | Biopuces
| | Sample_contact_institute | IGBMC
| | Sample_contact_address | 1 rue Laurent Fries
| | Sample_contact_city | Illkirch
| | Sample_contact_zip/postal_code | 67400
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451404/suppl/GSM451404_JZR_10_230_2.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451404/suppl/GSM451404_JZR_10_230_2.CHP.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451404/suppl/GSM451404_JZR_10_230_2.EXP.gz
| | Sample_series_id | GSE18055
| | Sample_data_row_count | 31099
| | |
|
GSM451405 | GPL1355 |
|
Nucleus Accumbens Cocaine Self-adminitration TsA treatment replicate 2
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Nucleus Accumbens_TsA
|
gender: Male
strain: Wistar
tissue: Nucleus Accumbens
treatment: TsA
|
n/a
|
| Sample_geo_accession | GSM451405
| | Sample_status | Public on Jan 21 2010
| | Sample_submission_date | Sep 10 2009
| | Sample_last_update_date | Jan 21 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rats were sacrificed 2 h after the 4th daily cocaine self-administration session by an overdose of pentobarbital (100 mg/kg, i.p.) and their brains were removed.The anterior cingulate cortex and the nucleus accumbens were dissected. Samples from two rats were pooled.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted according to the procedure described by Chomczynski and Sacchi, 1987.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 µg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45°C on GeneChip Rat Genome 230 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data were processed using the Affymetrix GeneChip Operating Software (GCOS v1.4; Microarray Suite (MAS 5.0) algorithm).
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Doulaye,,Dembele
| | Sample_contact_email | doulaye@igbmc.fr
| | Sample_contact_phone | +33 3 88 65 35 28
| | Sample_contact_department | Biopuces
| | Sample_contact_institute | IGBMC
| | Sample_contact_address | 1 rue Laurent Fries
| | Sample_contact_city | Illkirch
| | Sample_contact_zip/postal_code | 67400
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451405/suppl/GSM451405_JZR_11_230_2.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451405/suppl/GSM451405_JZR_11_230_2.CHP.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451405/suppl/GSM451405_JZR_11_230_2.EXP.gz
| | Sample_series_id | GSE18055
| | Sample_data_row_count | 31099
| | |
|
GSM451406 | GPL1355 |
|
Nucleus Accumbens Cocaine Self-adminitration TsA treatment replicate 3
|
Nucleus Accumbens_TsA
|
gender: Male
strain: Wistar
tissue: Nucleus Accumbens
treatment: TsA
|
n/a
|
| Sample_geo_accession | GSM451406
| | Sample_status | Public on Jan 21 2010
| | Sample_submission_date | Sep 10 2009
| | Sample_last_update_date | Jan 21 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rats were sacrificed 2 h after the 4th daily cocaine self-administration session by an overdose of pentobarbital (100 mg/kg, i.p.) and their brains were removed.The anterior cingulate cortex and the nucleus accumbens were dissected. Samples from two rats were pooled.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was extracted according to the procedure described by Chomczynski and Sacchi, 1987.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 µg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45°C on GeneChip Rat Genome 230 2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | Data were processed using the Affymetrix GeneChip Operating Software (GCOS v1.4; Microarray Suite (MAS 5.0) algorithm).
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Doulaye,,Dembele
| | Sample_contact_email | doulaye@igbmc.fr
| | Sample_contact_phone | +33 3 88 65 35 28
| | Sample_contact_department | Biopuces
| | Sample_contact_institute | IGBMC
| | Sample_contact_address | 1 rue Laurent Fries
| | Sample_contact_city | Illkirch
| | Sample_contact_zip/postal_code | 67400
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451406/suppl/GSM451406_JZR_12_230_2.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451406/suppl/GSM451406_JZR_12_230_2.CHP.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM451nnn/GSM451406/suppl/GSM451406_JZR_12_230_2.EXP.gz
| | Sample_series_id | GSE18055
| | Sample_data_row_count | 31099
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