Search results for the GEO ID: GSE18211  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM455303 | GPL1261 |
|
XX SSCs at E11.5, pool 1
|
Mouse E11.5 ovary
|
age: Embryonic day (E) 11.5
gender: Female
tissue: ovary
cell type: somatic support cells (SSC)
strain: transgenic FVB.Cg-Tg(Tyr)3412ARpw Tg(Sry-EGFP)92EI
|
Gene expression data from E11.5 XX isolated SSCs
|
| Sample_geo_accession | GSM455303
| | Sample_status | Public on Nov 09 2009
| | Sample_submission_date | Sep 22 2009
| | Sample_last_update_date | Nov 09 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the PicoPureTM RNA isolation kit (Arcturus) per manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Total RNA was amplified and biotin-labelled using the TargetAmp 2 -Round Aminoallyl-aRNA Amplification Kit (Epicenter Biotechnologies) according to the manufacturer's instructions.
| | Sample_hyb_protocol | 10ug of cRNA was hybridized on the Mouse Genome 430v2.0 GeneChipTM array.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip Scanner 3000 (Affymetrix) laser confocal scanner.
| | Sample_data_processing | Probe level data were imported into the R software environment, and R/affy software was used to normalize the data, perform background subtraction, and obtain summary expression values for each probe.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Gerrit,J,Bouma
| | Sample_contact_email | Gerrit.Bouma@colostate.edu
| | Sample_contact_department | Biomedical Sciences
| | Sample_contact_institute | Colorado State University
| | Sample_contact_address | 3801 W. Rampart Road
| | Sample_contact_city | Fort Collins
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80523
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM455nnn/GSM455303/suppl/GSM455303.CEL.gz
| | Sample_series_id | GSE18211
| | Sample_data_row_count | 45037
| | |
|
GSM455304 | GPL1261 |
|
XX SSCs at E11.5, pool 2
|
Mouse E11.5 ovary
|
age: Embryonic day (E) 11.5
gender: Female
tissue: ovary
cell type: somatic support cells (SSC)
strain: transgenic FVB.Cg-Tg(Tyr)3412ARpw Tg(Sry-EGFP)92EI
|
Gene expression data from E11.5 XX isolated SSCs
|
| Sample_geo_accession | GSM455304
| | Sample_status | Public on Nov 09 2009
| | Sample_submission_date | Sep 22 2009
| | Sample_last_update_date | Nov 09 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the PicoPureTM RNA isolation kit (Arcturus) per manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Total RNA was amplified and biotin-labelled using the TargetAmp 2 -Round Aminoallyl-aRNA Amplification Kit (Epicenter Biotechnologies) according to the manufacturer's instructions.
| | Sample_hyb_protocol | 10ug of cRNA was hybridized on the Mouse Genome 430v2.0 GeneChipTM array.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip Scanner 3000 (Affymetrix) laser confocal scanner.
| | Sample_data_processing | Probe level data were imported into the R software environment, and R/affy software was used to normalize the data, perform background subtraction, and obtain summary expression values for each probe.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Gerrit,J,Bouma
| | Sample_contact_email | Gerrit.Bouma@colostate.edu
| | Sample_contact_department | Biomedical Sciences
| | Sample_contact_institute | Colorado State University
| | Sample_contact_address | 3801 W. Rampart Road
| | Sample_contact_city | Fort Collins
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80523
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM455nnn/GSM455304/suppl/GSM455304.CEL.gz
| | Sample_series_id | GSE18211
| | Sample_data_row_count | 45037
| | |
|
GSM455305 | GPL1261 |
|
XX SSCs at E11.5, pool 3
|
Mouse E11.5 ovary
|
age: Embryonic day (E) 11.5
gender: Female
tissue: ovary
cell type: somatic support cells (SSC)
strain: transgenic FVB.Cg-Tg(Tyr)3412ARpw Tg(Sry-EGFP)92EI
|
Gene expression data from E11.5 XX isolated SSCs
|
| Sample_geo_accession | GSM455305
| | Sample_status | Public on Nov 09 2009
| | Sample_submission_date | Sep 22 2009
| | Sample_last_update_date | Nov 09 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the PicoPureTM RNA isolation kit (Arcturus) per manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Total RNA was amplified and biotin-labelled using the TargetAmp 2 -Round Aminoallyl-aRNA Amplification Kit (Epicenter Biotechnologies) according to the manufacturer's instructions.
| | Sample_hyb_protocol | 10ug of cRNA was hybridized on the Mouse Genome 430v2.0 GeneChipTM array.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip Scanner 3000 (Affymetrix) laser confocal scanner.
| | Sample_data_processing | Probe level data were imported into the R software environment, and R/affy software was used to normalize the data, perform background subtraction, and obtain summary expression values for each probe.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Gerrit,J,Bouma
| | Sample_contact_email | Gerrit.Bouma@colostate.edu
| | Sample_contact_department | Biomedical Sciences
| | Sample_contact_institute | Colorado State University
| | Sample_contact_address | 3801 W. Rampart Road
| | Sample_contact_city | Fort Collins
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80523
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM455nnn/GSM455305/suppl/GSM455305.CEL.gz
| | Sample_series_id | GSE18211
| | Sample_data_row_count | 45037
| | |
|
GSM455306 | GPL1261 |
|
XY SSCs at E11.5, pool 1
|
Mouse E11.5 testis
|
age: Embryonic day (E) 11.5
gender: Male
tissue: testis
cell type: somatic support cells (SSC)
strain: transgenic FVB.Cg-Tg(Tyr)3412ARpw Tg(Sry-EGFP)92EI
|
Gene expression data from E11.5 XY isolated SSCs
|
| Sample_geo_accession | GSM455306
| | Sample_status | Public on Nov 09 2009
| | Sample_submission_date | Sep 22 2009
| | Sample_last_update_date | Nov 09 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the PicoPureTM RNA isolation kit (Arcturus) per manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Total RNA was amplified and biotin-labelled using the TargetAmp 2 -Round Aminoallyl-aRNA Amplification Kit (Epicenter Biotechnologies) according to the manufacturer's instructions.
| | Sample_hyb_protocol | 10ug of cRNA was hybridized on the Mouse Genome 430v2.0 GeneChipTM array.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip Scanner 3000 (Affymetrix) laser confocal scanner.
| | Sample_data_processing | Probe level data were imported into the R software environment, and R/affy software was used to normalize the data, perform background subtraction, and obtain summary expression values for each probe.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Gerrit,J,Bouma
| | Sample_contact_email | Gerrit.Bouma@colostate.edu
| | Sample_contact_department | Biomedical Sciences
| | Sample_contact_institute | Colorado State University
| | Sample_contact_address | 3801 W. Rampart Road
| | Sample_contact_city | Fort Collins
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80523
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM455nnn/GSM455306/suppl/GSM455306.CEL.gz
| | Sample_series_id | GSE18211
| | Sample_data_row_count | 45037
| | |
|
GSM455307 | GPL1261 |
|
XY SSCs at E11.5, pool 2
|
Mouse E11.5 testis
|
age: Embryonic day (E) 11.5
gender: Male
tissue: testis
cell type: somatic support cells (SSC)
strain: transgenic FVB.Cg-Tg(Tyr)3412ARpw Tg(Sry-EGFP)92EI
|
Gene expression data from E11.5 XY isolated SSCs
|
| Sample_geo_accession | GSM455307
| | Sample_status | Public on Nov 09 2009
| | Sample_submission_date | Sep 22 2009
| | Sample_last_update_date | Nov 09 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the PicoPureTM RNA isolation kit (Arcturus) per manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Total RNA was amplified and biotin-labelled using the TargetAmp 2 -Round Aminoallyl-aRNA Amplification Kit (Epicenter Biotechnologies) according to the manufacturer's instructions.
| | Sample_hyb_protocol | 10ug of cRNA was hybridized on the Mouse Genome 430v2.0 GeneChipTM array.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip Scanner 3000 (Affymetrix) laser confocal scanner.
| | Sample_data_processing | Probe level data were imported into the R software environment, and R/affy software was used to normalize the data, perform background subtraction, and obtain summary expression values for each probe.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Gerrit,J,Bouma
| | Sample_contact_email | Gerrit.Bouma@colostate.edu
| | Sample_contact_department | Biomedical Sciences
| | Sample_contact_institute | Colorado State University
| | Sample_contact_address | 3801 W. Rampart Road
| | Sample_contact_city | Fort Collins
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80523
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM455nnn/GSM455307/suppl/GSM455307.CEL.gz
| | Sample_series_id | GSE18211
| | Sample_data_row_count | 45037
| | |
|
GSM455308 | GPL1261 |
|
XY SSCs at E11.5, pool 3
|
Mouse E11.5 testis
|
age: Embryonic day (E) 11.5
gender: Male
tissue: testis
cell type: somatic support cells (SSC)
strain: transgenic FVB.Cg-Tg(Tyr)3412ARpw Tg(Sry-EGFP)92EI
|
Gene expression data from E11.5 XY isolated SSCs
|
| Sample_geo_accession | GSM455308
| | Sample_status | Public on Nov 09 2009
| | Sample_submission_date | Sep 22 2009
| | Sample_last_update_date | Nov 09 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the PicoPureTM RNA isolation kit (Arcturus) per manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Total RNA was amplified and biotin-labelled using the TargetAmp 2 -Round Aminoallyl-aRNA Amplification Kit (Epicenter Biotechnologies) according to the manufacturer's instructions.
| | Sample_hyb_protocol | 10ug of cRNA was hybridized on the Mouse Genome 430v2.0 GeneChipTM array.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip Scanner 3000 (Affymetrix) laser confocal scanner.
| | Sample_data_processing | Probe level data were imported into the R software environment, and R/affy software was used to normalize the data, perform background subtraction, and obtain summary expression values for each probe.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Gerrit,J,Bouma
| | Sample_contact_email | Gerrit.Bouma@colostate.edu
| | Sample_contact_department | Biomedical Sciences
| | Sample_contact_institute | Colorado State University
| | Sample_contact_address | 3801 W. Rampart Road
| | Sample_contact_city | Fort Collins
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80523
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM455nnn/GSM455308/suppl/GSM455308.CEL.gz
| | Sample_series_id | GSE18211
| | Sample_data_row_count | 45037
| | |
|
GSM455309 | GPL1261 |
|
XX SSCs at E12.5, pool 1
|
Mouse E12.5 ovary
|
age: Embryonic day (E) 12.5
gender: Female
tissue: ovary
cell type: somatic support cells (SSC)
strain: transgenic FVB.Cg-Tg(Tyr)3412ARpw Tg(Sry-EGFP)92EI
|
Gene expression data from E12.5 XX isolated SSCs
|
| Sample_geo_accession | GSM455309
| | Sample_status | Public on Nov 09 2009
| | Sample_submission_date | Sep 22 2009
| | Sample_last_update_date | Nov 09 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the PicoPureTM RNA isolation kit (Arcturus) per manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Total RNA was amplified and biotin-labelled using the TargetAmp 2 -Round Aminoallyl-aRNA Amplification Kit (Epicenter Biotechnologies) according to the manufacturer's instructions.
| | Sample_hyb_protocol | 10ug of cRNA was hybridized on the Mouse Genome 430v2.0 GeneChipTM array.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip Scanner 3000 (Affymetrix) laser confocal scanner.
| | Sample_data_processing | Probe level data were imported into the R software environment, and R/affy software was used to normalize the data, perform background subtraction, and obtain summary expression values for each probe.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Gerrit,J,Bouma
| | Sample_contact_email | Gerrit.Bouma@colostate.edu
| | Sample_contact_department | Biomedical Sciences
| | Sample_contact_institute | Colorado State University
| | Sample_contact_address | 3801 W. Rampart Road
| | Sample_contact_city | Fort Collins
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80523
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM455nnn/GSM455309/suppl/GSM455309.CEL.gz
| | Sample_series_id | GSE18211
| | Sample_data_row_count | 45037
| | |
|
GSM455310 | GPL1261 |
|
XX SSCs at E12.5, pool 2
|
Mouse E12.5 ovary
|
age: Embryonic day (E) 12.5
gender: Female
tissue: ovary
cell type: somatic support cells (SSC)
strain: transgenic FVB.Cg-Tg(Tyr)3412ARpw Tg(Sry-EGFP)92EI
|
Gene expression data from E12.5 XX isolated SSCs
|
| Sample_geo_accession | GSM455310
| | Sample_status | Public on Nov 09 2009
| | Sample_submission_date | Sep 22 2009
| | Sample_last_update_date | Nov 09 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the PicoPureTM RNA isolation kit (Arcturus) per manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Total RNA was amplified and biotin-labelled using the TargetAmp 2 -Round Aminoallyl-aRNA Amplification Kit (Epicenter Biotechnologies) according to the manufacturer's instructions.
| | Sample_hyb_protocol | 10ug of cRNA was hybridized on the Mouse Genome 430v2.0 GeneChipTM array.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip Scanner 3000 (Affymetrix) laser confocal scanner.
| | Sample_data_processing | Probe level data were imported into the R software environment, and R/affy software was used to normalize the data, perform background subtraction, and obtain summary expression values for each probe.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Gerrit,J,Bouma
| | Sample_contact_email | Gerrit.Bouma@colostate.edu
| | Sample_contact_department | Biomedical Sciences
| | Sample_contact_institute | Colorado State University
| | Sample_contact_address | 3801 W. Rampart Road
| | Sample_contact_city | Fort Collins
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80523
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM455nnn/GSM455310/suppl/GSM455310.CEL.gz
| | Sample_series_id | GSE18211
| | Sample_data_row_count | 45037
| | |
|
GSM455311 | GPL1261 |
|
XX SSCs at E12.5, pool 3
|
Mouse E12.5 ovary
|
age: Embryonic day (E) 12.5
gender: Female
tissue: ovary
cell type: somatic support cells (SSC)
strain: transgenic FVB.Cg-Tg(Tyr)3412ARpw Tg(Sry-EGFP)92EI
|
Gene expression data from E12.5 XX isolated SSCs
|
| Sample_geo_accession | GSM455311
| | Sample_status | Public on Nov 09 2009
| | Sample_submission_date | Sep 22 2009
| | Sample_last_update_date | Nov 09 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the PicoPureTM RNA isolation kit (Arcturus) per manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Total RNA was amplified and biotin-labelled using the TargetAmp 2 -Round Aminoallyl-aRNA Amplification Kit (Epicenter Biotechnologies) according to the manufacturer's instructions.
| | Sample_hyb_protocol | 10ug of cRNA was hybridized on the Mouse Genome 430v2.0 GeneChipTM array.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip Scanner 3000 (Affymetrix) laser confocal scanner.
| | Sample_data_processing | Probe level data were imported into the R software environment, and R/affy software was used to normalize the data, perform background subtraction, and obtain summary expression values for each probe.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Gerrit,J,Bouma
| | Sample_contact_email | Gerrit.Bouma@colostate.edu
| | Sample_contact_department | Biomedical Sciences
| | Sample_contact_institute | Colorado State University
| | Sample_contact_address | 3801 W. Rampart Road
| | Sample_contact_city | Fort Collins
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80523
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM455nnn/GSM455311/suppl/GSM455311.CEL.gz
| | Sample_series_id | GSE18211
| | Sample_data_row_count | 45037
| | |
|
GSM455312 | GPL1261 |
|
XY SSCs at E12.5, pool 1
|
Mouse E12.5 testis
|
age: Embryonic day (E) 12.5
gender: Male
tissue: testis
cell type: somatic support cells (SSC)
strain: transgenic FVB.Cg-Tg(Tyr)3412ARpw Tg(Sry-EGFP)92EI
|
Gene expression data from E12.5 XY isolated SSCs
|
| Sample_geo_accession | GSM455312
| | Sample_status | Public on Nov 09 2009
| | Sample_submission_date | Sep 22 2009
| | Sample_last_update_date | Nov 09 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the PicoPureTM RNA isolation kit (Arcturus) per manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Total RNA was amplified and biotin-labelled using the TargetAmp 2 -Round Aminoallyl-aRNA Amplification Kit (Epicenter Biotechnologies) according to the manufacturer's instructions.
| | Sample_hyb_protocol | 10ug of cRNA was hybridized on the Mouse Genome 430v2.0 GeneChipTM array.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip Scanner 3000 (Affymetrix) laser confocal scanner.
| | Sample_data_processing | Probe level data were imported into the R software environment, and R/affy software was used to normalize the data, perform background subtraction, and obtain summary expression values for each probe.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Gerrit,J,Bouma
| | Sample_contact_email | Gerrit.Bouma@colostate.edu
| | Sample_contact_department | Biomedical Sciences
| | Sample_contact_institute | Colorado State University
| | Sample_contact_address | 3801 W. Rampart Road
| | Sample_contact_city | Fort Collins
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80523
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM455nnn/GSM455312/suppl/GSM455312.CEL.gz
| | Sample_series_id | GSE18211
| | Sample_data_row_count | 45037
| | |
|
GSM455313 | GPL1261 |
|
XY SSCs at E12.5, pool 2
|
Mouse E12.5 testis
|
age: Embryonic day (E) 12.5
gender: Male
tissue: testis
cell type: somatic support cells (SSC)
strain: transgenic FVB.Cg-Tg(Tyr)3412ARpw Tg(Sry-EGFP)92EI
|
Gene expression data from E12.5 XY isolated SSCs
|
| Sample_geo_accession | GSM455313
| | Sample_status | Public on Nov 09 2009
| | Sample_submission_date | Sep 22 2009
| | Sample_last_update_date | Nov 09 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the PicoPureTM RNA isolation kit (Arcturus) per manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Total RNA was amplified and biotin-labelled using the TargetAmp 2 -Round Aminoallyl-aRNA Amplification Kit (Epicenter Biotechnologies) according to the manufacturer's instructions.
| | Sample_hyb_protocol | 10ug of cRNA was hybridized on the Mouse Genome 430v2.0 GeneChipTM array.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip Scanner 3000 (Affymetrix) laser confocal scanner.
| | Sample_data_processing | Probe level data were imported into the R software environment, and R/affy software was used to normalize the data, perform background subtraction, and obtain summary expression values for each probe.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Gerrit,J,Bouma
| | Sample_contact_email | Gerrit.Bouma@colostate.edu
| | Sample_contact_department | Biomedical Sciences
| | Sample_contact_institute | Colorado State University
| | Sample_contact_address | 3801 W. Rampart Road
| | Sample_contact_city | Fort Collins
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80523
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM455nnn/GSM455313/suppl/GSM455313.CEL.gz
| | Sample_series_id | GSE18211
| | Sample_data_row_count | 45037
| | |
|
GSM455314 | GPL1261 |
|
XY SSCs at E12.5, pool 3
|
Mouse E12.5 testis
|
age: Embryonic day (E) 12.5
gender: Male
tissue: testis
cell type: somatic support cells (SSC)
strain: transgenic FVB.Cg-Tg(Tyr)3412ARpw Tg(Sry-EGFP)92EI
|
Gene expression data from E12.5 XY isolated SSCs
|
| Sample_geo_accession | GSM455314
| | Sample_status | Public on Nov 09 2009
| | Sample_submission_date | Sep 22 2009
| | Sample_last_update_date | Nov 09 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using the PicoPureTM RNA isolation kit (Arcturus) per manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Total RNA was amplified and biotin-labelled using the TargetAmp 2 -Round Aminoallyl-aRNA Amplification Kit (Epicenter Biotechnologies) according to the manufacturer's instructions.
| | Sample_hyb_protocol | 10ug of cRNA was hybridized on the Mouse Genome 430v2.0 GeneChipTM array.
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip Scanner 3000 (Affymetrix) laser confocal scanner.
| | Sample_data_processing | Probe level data were imported into the R software environment, and R/affy software was used to normalize the data, perform background subtraction, and obtain summary expression values for each probe.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Gerrit,J,Bouma
| | Sample_contact_email | Gerrit.Bouma@colostate.edu
| | Sample_contact_department | Biomedical Sciences
| | Sample_contact_institute | Colorado State University
| | Sample_contact_address | 3801 W. Rampart Road
| | Sample_contact_city | Fort Collins
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80523
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM455nnn/GSM455314/suppl/GSM455314.CEL.gz
| | Sample_series_id | GSE18211
| | Sample_data_row_count | 45037
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