Search results for the GEO ID: GSE18331 ![](/q11.jpeg) |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM457671 | GPL570 |
|
PE1
|
Pleural effusion from triple negative breast cancer. Grown in 3D culture.
|
prediction: sensitive to valproic acid
tissue: Pleural Effusion
|
no additional information
|
Sample_geo_accession | GSM457671
| Sample_status | Public on Jun 01 2011
| Sample_submission_date | Sep 29 2009
| Sample_last_update_date | Jun 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Standard affymetrix protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard affymetrix protocol
| Sample_hyb_protocol | Standard affymetrix protocol
| Sample_scan_protocol | Affymetrix gene chip scanner
| Sample_data_processing | Mas5.0
| Sample_platform_id | GPL570
| Sample_contact_name | Adam,,Gustafson
| Sample_contact_institute | Boston University
| Sample_contact_address | 44 Cummington St
| Sample_contact_city | Boston
| Sample_contact_state | MA
| Sample_contact_zip/postal_code | 02215
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM457nnn/GSM457671/suppl/GSM457671.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM457nnn/GSM457671/suppl/GSM457671.CHP.gz
| Sample_series_id | GSE18331
| Sample_data_row_count | 54675
| |
|
GSM457672 | GPL570 |
|
PE2
|
Pleural effusion from triple negative breast cancer. Grown in 3D culture.
|
prediction: sensitive to valproic acid
tissue: Pleural Effusion
|
no additional information
|
Sample_geo_accession | GSM457672
| Sample_status | Public on Jun 01 2011
| Sample_submission_date | Sep 29 2009
| Sample_last_update_date | Jun 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Standard affymetrix protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard affymetrix protocol
| Sample_hyb_protocol | Standard affymetrix protocol
| Sample_scan_protocol | Affymetrix gene chip scanner
| Sample_data_processing | Mas5.0
| Sample_platform_id | GPL570
| Sample_contact_name | Adam,,Gustafson
| Sample_contact_institute | Boston University
| Sample_contact_address | 44 Cummington St
| Sample_contact_city | Boston
| Sample_contact_state | MA
| Sample_contact_zip/postal_code | 02215
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM457nnn/GSM457672/suppl/GSM457672.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM457nnn/GSM457672/suppl/GSM457672.CHP.gz
| Sample_series_id | GSE18331
| Sample_data_row_count | 54675
| |
|
GSM457673 | GPL570 |
|
PE4
|
Pleural effusion from triple negative breast cancer. Grown in 3D culture.
|
prediction: sensitive to valproic acid
tissue: Pleural Effusion
|
no additional information
|
Sample_geo_accession | GSM457673
| Sample_status | Public on Jun 01 2011
| Sample_submission_date | Sep 29 2009
| Sample_last_update_date | Jun 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Standard affymetrix protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard affymetrix protocol
| Sample_hyb_protocol | Standard affymetrix protocol
| Sample_scan_protocol | Affymetrix gene chip scanner
| Sample_data_processing | Mas5.0
| Sample_platform_id | GPL570
| Sample_contact_name | Adam,,Gustafson
| Sample_contact_institute | Boston University
| Sample_contact_address | 44 Cummington St
| Sample_contact_city | Boston
| Sample_contact_state | MA
| Sample_contact_zip/postal_code | 02215
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM457nnn/GSM457673/suppl/GSM457673.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM457nnn/GSM457673/suppl/GSM457673.CHP.gz
| Sample_series_id | GSE18331
| Sample_data_row_count | 54675
| |
|
GSM457674 | GPL570 |
|
PE5
|
Pleural effusion from triple negative breast cancer. Grown in 3D culture.
|
prediction: sensitive to valproic acid
tissue: Pleural Effusion
|
no additional information
|
Sample_geo_accession | GSM457674
| Sample_status | Public on Jun 01 2011
| Sample_submission_date | Sep 29 2009
| Sample_last_update_date | Jun 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Standard affymetrix protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard affymetrix protocol
| Sample_hyb_protocol | Standard affymetrix protocol
| Sample_scan_protocol | Affymetrix gene chip scanner
| Sample_data_processing | Mas5.0
| Sample_platform_id | GPL570
| Sample_contact_name | Adam,,Gustafson
| Sample_contact_institute | Boston University
| Sample_contact_address | 44 Cummington St
| Sample_contact_city | Boston
| Sample_contact_state | MA
| Sample_contact_zip/postal_code | 02215
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM457nnn/GSM457674/suppl/GSM457674.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM457nnn/GSM457674/suppl/GSM457674.CHP.gz
| Sample_series_id | GSE18331
| Sample_data_row_count | 54675
| |
|
GSM457675 | GPL570 |
|
Control 00918
|
Pleural effusion from triple negative breast cancer. Grown in 3D culture.
|
prediction: not sensitive to valproic acid
tissue: Pleural Effusion
|
no additional information
|
Sample_geo_accession | GSM457675
| Sample_status | Public on Jun 01 2011
| Sample_submission_date | Sep 29 2009
| Sample_last_update_date | Jun 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Standard affymetrix protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard affymetrix protocol
| Sample_hyb_protocol | Standard affymetrix protocol
| Sample_scan_protocol | Affymetrix gene chip scanner
| Sample_data_processing | Mas5.0
| Sample_platform_id | GPL570
| Sample_contact_name | Adam,,Gustafson
| Sample_contact_institute | Boston University
| Sample_contact_address | 44 Cummington St
| Sample_contact_city | Boston
| Sample_contact_state | MA
| Sample_contact_zip/postal_code | 02215
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM457nnn/GSM457675/suppl/GSM457675.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM457nnn/GSM457675/suppl/GSM457675.CHP.gz
| Sample_series_id | GSE18331
| Sample_data_row_count | 54675
| |
|
GSM457676 | GPL570 |
|
Control 01056
|
Pleural effusion from triple negative breast cancer. Grown in 3D culture.
|
prediction: not sensitive to valproic acid
tissue: Pleural Effusion
|
no additional information
|
Sample_geo_accession | GSM457676
| Sample_status | Public on Jun 01 2011
| Sample_submission_date | Sep 29 2009
| Sample_last_update_date | Jun 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Standard affymetrix protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard affymetrix protocol
| Sample_hyb_protocol | Standard affymetrix protocol
| Sample_scan_protocol | Affymetrix gene chip scanner
| Sample_data_processing | Mas5.0
| Sample_platform_id | GPL570
| Sample_contact_name | Adam,,Gustafson
| Sample_contact_institute | Boston University
| Sample_contact_address | 44 Cummington St
| Sample_contact_city | Boston
| Sample_contact_state | MA
| Sample_contact_zip/postal_code | 02215
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM457nnn/GSM457676/suppl/GSM457676.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM457nnn/GSM457676/suppl/GSM457676.CHP.gz
| Sample_series_id | GSE18331
| Sample_data_row_count | 54675
| |
|
GSM457677 | GPL570 |
|
Control 03766
|
Pleural effusion from triple negative breast cancer. Grown in 3D culture.
|
prediction: not sensitive to valproic acid
tissue: Pleural Effusion
|
no additional information
|
Sample_geo_accession | GSM457677
| Sample_status | Public on Jun 01 2011
| Sample_submission_date | Sep 29 2009
| Sample_last_update_date | Jun 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Standard affymetrix protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard affymetrix protocol
| Sample_hyb_protocol | Standard affymetrix protocol
| Sample_scan_protocol | Affymetrix gene chip scanner
| Sample_data_processing | Mas5.0
| Sample_platform_id | GPL570
| Sample_contact_name | Adam,,Gustafson
| Sample_contact_institute | Boston University
| Sample_contact_address | 44 Cummington St
| Sample_contact_city | Boston
| Sample_contact_state | MA
| Sample_contact_zip/postal_code | 02215
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM457nnn/GSM457677/suppl/GSM457677.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM457nnn/GSM457677/suppl/GSM457677.CHP.gz
| Sample_series_id | GSE18331
| Sample_data_row_count | 54675
| |
|
GSM457678 | GPL570 |
|
Control 04852
|
Pleural effusion from triple negative breast cancer. Grown in 3D culture.
|
prediction: not sensitive to valproic acid
tissue: Pleural Effusion
|
no additional information
|
Sample_geo_accession | GSM457678
| Sample_status | Public on Jun 01 2011
| Sample_submission_date | Sep 29 2009
| Sample_last_update_date | Jun 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Standard affymetrix protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard affymetrix protocol
| Sample_hyb_protocol | Standard affymetrix protocol
| Sample_scan_protocol | Affymetrix gene chip scanner
| Sample_data_processing | Mas5.0
| Sample_platform_id | GPL570
| Sample_contact_name | Adam,,Gustafson
| Sample_contact_institute | Boston University
| Sample_contact_address | 44 Cummington St
| Sample_contact_city | Boston
| Sample_contact_state | MA
| Sample_contact_zip/postal_code | 02215
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM457nnn/GSM457678/suppl/GSM457678.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM457nnn/GSM457678/suppl/GSM457678.CHP.gz
| Sample_series_id | GSE18331
| Sample_data_row_count | 54675
| |
|
GSM709601 | GPL570 |
|
Breast Cancer Pleural effusion E21518
|
Pleural Effusion breast cancer
|
tissue: Pleural Effusion
prediction: resistant to valproic acid
|
|
Sample_geo_accession | GSM709601
| Sample_status | Public on Jun 01 2011
| Sample_submission_date | Apr 14 2011
| Sample_last_update_date | Jun 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Standard Affymetrix Protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| Sample_hyb_protocol | Standard Affymetrix Protocol
| Sample_scan_protocol | Standard Affymetrix Protocol
| Sample_data_processing | Mas5
| Sample_platform_id | GPL570
| Sample_contact_name | Adam,,Gustafson
| Sample_contact_institute | Boston University
| Sample_contact_address | 44 Cummington St
| Sample_contact_city | Boston
| Sample_contact_state | MA
| Sample_contact_zip/postal_code | 02215
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM709nnn/GSM709601/suppl/GSM709601.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM709nnn/GSM709601/suppl/GSM709601.CHP.gz
| Sample_series_id | GSE18331
| Sample_data_row_count | 54675
| |
|
GSM709633 | GPL570 |
|
Breast cancer Pleural effusion I27253
|
Pleural Effusion breast cancer
|
tissue: Pleural Effusion
prediction: resistant to valproic acid
|
|
Sample_geo_accession | GSM709633
| Sample_status | Public on Jun 01 2011
| Sample_submission_date | Apr 14 2011
| Sample_last_update_date | Jun 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Standard Affymetrix Protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| Sample_hyb_protocol | Standard Affymetrix Protocol
| Sample_scan_protocol | Standard Affymetrix Protocol
| Sample_data_processing | Mas5
| Sample_platform_id | GPL570
| Sample_contact_name | Adam,,Gustafson
| Sample_contact_institute | Boston University
| Sample_contact_address | 44 Cummington St
| Sample_contact_city | Boston
| Sample_contact_state | MA
| Sample_contact_zip/postal_code | 02215
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM709nnn/GSM709633/suppl/GSM709633.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM709nnn/GSM709633/suppl/GSM709633.CHP.gz
| Sample_series_id | GSE18331
| Sample_data_row_count | 54675
| |
|
GSM709634 | GPL570 |
|
Breast Cancer Pleural Effusion G22372
|
Breast Cancer Pleural Effusion
|
tissue: Pleural Effusion
prediction: intermediate sensitivity to valproic acid
|
|
Sample_geo_accession | GSM709634
| Sample_status | Public on Jun 01 2011
| Sample_submission_date | Apr 14 2011
| Sample_last_update_date | Jun 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Standard Affymetrix Protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| Sample_hyb_protocol | Standard Affymetrix Protocol
| Sample_scan_protocol | Standard Affymetrix Protocol
| Sample_data_processing | Mas5
| Sample_platform_id | GPL570
| Sample_contact_name | Adam,,Gustafson
| Sample_contact_institute | Boston University
| Sample_contact_address | 44 Cummington St
| Sample_contact_city | Boston
| Sample_contact_state | MA
| Sample_contact_zip/postal_code | 02215
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM709nnn/GSM709634/suppl/GSM709634.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM709nnn/GSM709634/suppl/GSM709634.CHP.gz
| Sample_series_id | GSE18331
| Sample_data_row_count | 54675
| |
|
GSM709635 | GPL570 |
|
Breast Cancer Pleural Effusion H10161
|
Breast Cancer Pleural Effusion
|
tissue: Pleural Effusion
prediction: sensitive to valproic acid
|
|
Sample_geo_accession | GSM709635
| Sample_status | Public on Jun 01 2011
| Sample_submission_date | Apr 14 2011
| Sample_last_update_date | Jun 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Standard Affymetrix Protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| Sample_hyb_protocol | Standard Affymetrix Protocol
| Sample_scan_protocol | Standard Affymetrix Protocol
| Sample_data_processing | Mas5
| Sample_platform_id | GPL570
| Sample_contact_name | Adam,,Gustafson
| Sample_contact_institute | Boston University
| Sample_contact_address | 44 Cummington St
| Sample_contact_city | Boston
| Sample_contact_state | MA
| Sample_contact_zip/postal_code | 02215
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM709nnn/GSM709635/suppl/GSM709635.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM709nnn/GSM709635/suppl/GSM709635.CHP.gz
| Sample_series_id | GSE18331
| Sample_data_row_count | 54675
| |
|
GSM709650 | GPL570 |
|
Breast Cancer Pleural Effusion H24458
|
Breast Cancer Pleural Effusion
|
tissue: Pleural Effusion
prediction: resistant to valproic acid
|
|
Sample_geo_accession | GSM709650
| Sample_status | Public on Jun 01 2011
| Sample_submission_date | Apr 14 2011
| Sample_last_update_date | Jun 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Standard Affymetrix Protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| Sample_hyb_protocol | Standard Affymetrix Protocol
| Sample_scan_protocol | Standard Affymetrix Protocol
| Sample_data_processing | Mas5
| Sample_platform_id | GPL570
| Sample_contact_name | Adam,,Gustafson
| Sample_contact_institute | Boston University
| Sample_contact_address | 44 Cummington St
| Sample_contact_city | Boston
| Sample_contact_state | MA
| Sample_contact_zip/postal_code | 02215
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM709nnn/GSM709650/suppl/GSM709650.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM709nnn/GSM709650/suppl/GSM709650.CHP.gz
| Sample_series_id | GSE18331
| Sample_data_row_count | 54675
| |
|
GSM709651 | GPL570 |
|
Breast Cancer Pleural Effusion E24334
|
Breast Cancer Pleural Effusion
|
tissue: Pleural Effusion
prediction: resistant to valproic acid
|
|
Sample_geo_accession | GSM709651
| Sample_status | Public on Jun 01 2011
| Sample_submission_date | Apr 14 2011
| Sample_last_update_date | Jun 01 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Standard Affymetrix Protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Standard Affymetrix Protocol
| Sample_hyb_protocol | Standard Affymetrix Protocol
| Sample_scan_protocol | Standard Affymetrix Protocol
| Sample_data_processing | Mas5
| Sample_platform_id | GPL570
| Sample_contact_name | Adam,,Gustafson
| Sample_contact_institute | Boston University
| Sample_contact_address | 44 Cummington St
| Sample_contact_city | Boston
| Sample_contact_state | MA
| Sample_contact_zip/postal_code | 02215
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM709nnn/GSM709651/suppl/GSM709651.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM709nnn/GSM709651/suppl/GSM709651.CHP.gz
| Sample_series_id | GSE18331
| Sample_data_row_count | 54675
| |
|
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