Search results for the GEO ID: GSE18358  |
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(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM458136 | GPL1261 |
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contr-1047
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Isolated glomeruli from 27-day-old male wild type FVB mouse
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tissue: Isolated glomeruli
age: 27-day-old
gender: male
strain: FVB/N (backcross N4)
type: Wild-type mouse
|
Isolated glomeruli from 27-day-old male FVB/N (backcross N4). Wild-type mouse.
|
| Sample_geo_accession | GSM458136
| | Sample_status | Public on Oct 02 2009
| | Sample_submission_date | Oct 01 2009
| | Sample_last_update_date | Oct 01 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using the Qiagen's RNeasy Total RNA Isolation kit (Qiagen GmBH, Hilden, Germany), and quality was assessed by agarose-formaldehyde gel electrophoresis.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | According to manufacturers instructions
| | Sample_hyb_protocol | According to manufacturers instructions
| | Sample_scan_protocol | According to manufacturers instructions
| | Sample_data_processing | RMA normalization (Irizary et al., 2003) using background adjustment, quantile normalization, and median polish as the summarization method
| | Sample_data_processing | Irizarry, R.A., Bolstad, B.M., Collin, F., Cope, L.M., Hobbs, B., Speed T.P. Summaries of Affymetrix GeneChip probe level data. Nucleic Acids Research 31(4): e15 (2003)
| | Sample_platform_id | GPL1261
| | Sample_contact_name | julien,,Ratelade
| | Sample_contact_email | julien.ratelade@inserm.fr
| | Sample_contact_institute | INSERM U574
| | Sample_contact_address | 149 rue de Sèvres
| | Sample_contact_city | Paris
| | Sample_contact_zip/postal_code | 75015
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM458nnn/GSM458136/suppl/GSM458136.CEL.gz
| | Sample_series_id | GSE18358
| | Sample_data_row_count | 45101
| | |
|
GSM458140 | GPL1261 |
|
contr-1057
|
Isolated glomeruli from 27-day-old male wild type FVB/N (backcross N4)
|
tissue: Isolated glomeruli
age: 27-day-old
gender: male
strain: FVB/N (backcross N4)
type: Wild-type mouse
|
Isolated glomeruli from 27-day-old male FVB/N (backcross N4). Wild-type mouse.
|
| Sample_geo_accession | GSM458140
| | Sample_status | Public on Oct 02 2009
| | Sample_submission_date | Oct 01 2009
| | Sample_last_update_date | Oct 01 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using the Qiagen's RNeasy Total RNA Isolation kit (Qiagen GmBH, Hilden, Germany), and quality was assessed by agarose-formaldehyde gel electrophoresis.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | According to manufacturers instructions
| | Sample_hyb_protocol | According to manufacturers instructions
| | Sample_scan_protocol | According to manufacturers instructions
| | Sample_data_processing | RMA normalization (Irizary et al., 2003) using background adjustment, quantile normalization, and median polish as the summarization method
| | Sample_data_processing | Irizarry, R.A., Bolstad, B.M., Collin, F., Cope, L.M., Hobbs, B., Speed T.P. Summaries of Affymetrix GeneChip probe level data. Nucleic Acids Research 31(4): e15 (2003)
| | Sample_platform_id | GPL1261
| | Sample_contact_name | julien,,Ratelade
| | Sample_contact_email | julien.ratelade@inserm.fr
| | Sample_contact_institute | INSERM U574
| | Sample_contact_address | 149 rue de Sèvres
| | Sample_contact_city | Paris
| | Sample_contact_zip/postal_code | 75015
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM458nnn/GSM458140/suppl/GSM458140.CEL.gz
| | Sample_series_id | GSE18358
| | Sample_data_row_count | 45101
| | |
|
GSM458141 | GPL1261 |
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contr-1064
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Isolated glomeruli from 27-day-old male wild type FVB/N (backcross N4)
|
tissue: Isolated glomeruli
age: 27-day-old
gender: male
strain: FVB/N (backcross N4)
type: Wild-type mouse
|
According to manufacturers instructions
|
| Sample_geo_accession | GSM458141
| | Sample_status | Public on Oct 02 2009
| | Sample_submission_date | Oct 01 2009
| | Sample_last_update_date | Oct 01 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using the Qiagen's RNeasy Total RNA Isolation kit (Qiagen GmBH, Hilden, Germany), and quality was assessed by agarose-formaldehyde gel electrophoresis.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | According to manufacturers instructions
| | Sample_hyb_protocol | According to manufacturers instructions
| | Sample_scan_protocol | According to manufacturers instructions
| | Sample_data_processing | RMA normalization (Irizary et al., 2003) using background adjustment, quantile normalization, and median polish as the summarization method
| | Sample_data_processing | Irizarry, R.A., Bolstad, B.M., Collin, F., Cope, L.M., Hobbs, B., Speed T.P. Summaries of Affymetrix GeneChip probe level data. Nucleic Acids Research 31(4): e15 (2003)
| | Sample_platform_id | GPL1261
| | Sample_contact_name | julien,,Ratelade
| | Sample_contact_email | julien.ratelade@inserm.fr
| | Sample_contact_institute | INSERM U574
| | Sample_contact_address | 149 rue de Sèvres
| | Sample_contact_city | Paris
| | Sample_contact_zip/postal_code | 75015
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM458nnn/GSM458141/suppl/GSM458141.CEL.gz
| | Sample_series_id | GSE18358
| | Sample_data_row_count | 45101
| | |
|
GSM458142 | GPL1261 |
|
contr-1068
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Isolated glomeruli from 27-day-old male wild type FVB/N (backcross N4)
|
tissue: Isolated glomeruli
age: 27-day-old
gender: male
strain: FVB/N (backcross N4)
type: Wild-type mouse
|
According to manufacturers instructions
|
| Sample_geo_accession | GSM458142
| | Sample_status | Public on Oct 02 2009
| | Sample_submission_date | Oct 01 2009
| | Sample_last_update_date | Oct 01 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using the Qiagen's RNeasy Total RNA Isolation kit (Qiagen GmBH, Hilden, Germany), and quality was assessed by agarose-formaldehyde gel electrophoresis.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | According to manufacturers instructions
| | Sample_hyb_protocol | According to manufacturers instructions
| | Sample_scan_protocol | According to manufacturers instructions
| | Sample_data_processing | RMA normalization (Irizary et al., 2003) using background adjustment, quantile normalization, and median polish as the summarization method
| | Sample_data_processing | Irizarry, R.A., Bolstad, B.M., Collin, F., Cope, L.M., Hobbs, B., Speed T.P. Summaries of Affymetrix GeneChip probe level data. Nucleic Acids Research 31(4): e15 (2003)
| | Sample_platform_id | GPL1261
| | Sample_contact_name | julien,,Ratelade
| | Sample_contact_email | julien.ratelade@inserm.fr
| | Sample_contact_institute | INSERM U574
| | Sample_contact_address | 149 rue de Sèvres
| | Sample_contact_city | Paris
| | Sample_contact_zip/postal_code | 75015
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM458nnn/GSM458142/suppl/GSM458142.CEL.gz
| | Sample_series_id | GSE18358
| | Sample_data_row_count | 45101
| | |
|
GSM458143 | GPL1261 |
|
contr-1102
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Isolated glomeruli from 27-day-old male wild type FVB/N (backcross N4)
|
tissue: Isolated glomeruli
age: 27-day-old
gender: male
strain: FVB/N (backcross N4)
type: Wild-type mouse
|
According to manufacturers instructions
|
| Sample_geo_accession | GSM458143
| | Sample_status | Public on Oct 02 2009
| | Sample_submission_date | Oct 01 2009
| | Sample_last_update_date | Oct 01 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using the Qiagen's RNeasy Total RNA Isolation kit (Qiagen GmBH, Hilden, Germany), and quality was assessed by agarose-formaldehyde gel electrophoresis.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | According to manufacturers instructions
| | Sample_hyb_protocol | According to manufacturers instructions
| | Sample_scan_protocol | According to manufacturers instructions
| | Sample_data_processing | RMA normalization (Irizary et al., 2003) using background adjustment, quantile normalization, and median polish as the summarization method
| | Sample_data_processing | Irizarry, R.A., Bolstad, B.M., Collin, F., Cope, L.M., Hobbs, B., Speed T.P. Summaries of Affymetrix GeneChip probe level data. Nucleic Acids Research 31(4): e15 (2003)
| | Sample_platform_id | GPL1261
| | Sample_contact_name | julien,,Ratelade
| | Sample_contact_email | julien.ratelade@inserm.fr
| | Sample_contact_institute | INSERM U574
| | Sample_contact_address | 149 rue de Sèvres
| | Sample_contact_city | Paris
| | Sample_contact_zip/postal_code | 75015
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM458nnn/GSM458143/suppl/GSM458143.CEL.gz
| | Sample_series_id | GSE18358
| | Sample_data_row_count | 45101
| | |
|
GSM458144 | GPL1261 |
|
ki-1058
|
Isolated glomeruli from 27-day-old male knockin FVB/N (backcross N4)
|
tissue: Isolated glomeruli
age: 27-day-old
gender: male
strain: FVB/N (backcross N4)
type: Knockin for the WT1 R394W mutation. Heterozygous for the mutation.
|
According to manufacturers instructions
|
| Sample_geo_accession | GSM458144
| | Sample_status | Public on Oct 02 2009
| | Sample_submission_date | Oct 01 2009
| | Sample_last_update_date | Oct 01 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using the Qiagen's RNeasy Total RNA Isolation kit (Qiagen GmBH, Hilden, Germany), and quality was assessed by agarose-formaldehyde gel electrophoresis.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | According to manufacturers instructions
| | Sample_hyb_protocol | According to manufacturers instructions
| | Sample_scan_protocol | According to manufacturers instructions
| | Sample_data_processing | RMA normalization (Irizary et al., 2003) using background adjustment, quantile normalization, and median polish as the summarization method
| | Sample_data_processing | Irizarry, R.A., Bolstad, B.M., Collin, F., Cope, L.M., Hobbs, B., Speed T.P. Summaries of Affymetrix GeneChip probe level data. Nucleic Acids Research 31(4): e15 (2003)
| | Sample_platform_id | GPL1261
| | Sample_contact_name | julien,,Ratelade
| | Sample_contact_email | julien.ratelade@inserm.fr
| | Sample_contact_institute | INSERM U574
| | Sample_contact_address | 149 rue de Sèvres
| | Sample_contact_city | Paris
| | Sample_contact_zip/postal_code | 75015
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM458nnn/GSM458144/suppl/GSM458144.CEL.gz
| | Sample_series_id | GSE18358
| | Sample_data_row_count | 45101
| | |
|
GSM458145 | GPL1261 |
|
ki-1065
|
Isolated glomeruli from 27-day-old male knockin FVB/N (backcross N4)
|
tissue: Isolated glomeruli
age: 27-day-old
gender: male
strain: FVB/N (backcross N4)
type: Knockin for the WT1 R394W mutation. Heterozygous for the mutation.
|
According to manufacturers instructions
|
| Sample_geo_accession | GSM458145
| | Sample_status | Public on Oct 02 2009
| | Sample_submission_date | Oct 01 2009
| | Sample_last_update_date | Oct 01 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using the Qiagen's RNeasy Total RNA Isolation kit (Qiagen GmBH, Hilden, Germany), and quality was assessed by agarose-formaldehyde gel electrophoresis.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | According to manufacturers instructions
| | Sample_hyb_protocol | According to manufacturers instructions
| | Sample_scan_protocol | According to manufacturers instructions
| | Sample_data_processing | RMA normalization (Irizary et al., 2003) using background adjustment, quantile normalization, and median polish as the summarization method
| | Sample_data_processing | Irizarry, R.A., Bolstad, B.M., Collin, F., Cope, L.M., Hobbs, B., Speed T.P. Summaries of Affymetrix GeneChip probe level data. Nucleic Acids Research 31(4): e15 (2003)
| | Sample_platform_id | GPL1261
| | Sample_contact_name | julien,,Ratelade
| | Sample_contact_email | julien.ratelade@inserm.fr
| | Sample_contact_institute | INSERM U574
| | Sample_contact_address | 149 rue de Sèvres
| | Sample_contact_city | Paris
| | Sample_contact_zip/postal_code | 75015
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM458nnn/GSM458145/suppl/GSM458145.CEL.gz
| | Sample_series_id | GSE18358
| | Sample_data_row_count | 45101
| | |
|
GSM458146 | GPL1261 |
|
ki-1066
|
Isolated glomeruli from 27-day-old male knockin FVB/N (backcross N4)
|
tissue: Isolated glomeruli
age: 27-day-old
gender: male
strain: FVB/N (backcross N4)
type: Knockin for the WT1 R394W mutation. Heterozygous for the mutation.
|
According to manufacturers instructions
|
| Sample_geo_accession | GSM458146
| | Sample_status | Public on Oct 02 2009
| | Sample_submission_date | Oct 01 2009
| | Sample_last_update_date | Oct 01 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using the Qiagen's RNeasy Total RNA Isolation kit (Qiagen GmBH, Hilden, Germany), and quality was assessed by agarose-formaldehyde gel electrophoresis.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | According to manufacturers instructions
| | Sample_hyb_protocol | According to manufacturers instructions
| | Sample_scan_protocol | According to manufacturers instructions
| | Sample_data_processing | RMA normalization (Irizary et al., 2003) using background adjustment, quantile normalization, and median polish as the summarization method
| | Sample_data_processing | Irizarry, R.A., Bolstad, B.M., Collin, F., Cope, L.M., Hobbs, B., Speed T.P. Summaries of Affymetrix GeneChip probe level data. Nucleic Acids Research 31(4): e15 (2003)
| | Sample_platform_id | GPL1261
| | Sample_contact_name | julien,,Ratelade
| | Sample_contact_email | julien.ratelade@inserm.fr
| | Sample_contact_institute | INSERM U574
| | Sample_contact_address | 149 rue de Sèvres
| | Sample_contact_city | Paris
| | Sample_contact_zip/postal_code | 75015
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM458nnn/GSM458146/suppl/GSM458146.CEL.gz
| | Sample_series_id | GSE18358
| | Sample_data_row_count | 45101
| | |
|
GSM458147 | GPL1261 |
|
ki-1067
|
Isolated glomeruli from 27-day-old male knockin FVB/N (backcross N4)
|
tissue: Isolated glomeruli
age: 27-day-old
gender: male
strain: FVB/N (backcross N4)
type: Knockin for the WT1 R394W mutation. Heterozygous for the mutation.
|
According to manufacturers instructions
|
| Sample_geo_accession | GSM458147
| | Sample_status | Public on Oct 02 2009
| | Sample_submission_date | Oct 01 2009
| | Sample_last_update_date | Oct 01 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using the Qiagen's RNeasy Total RNA Isolation kit (Qiagen GmBH, Hilden, Germany), and quality was assessed by agarose-formaldehyde gel electrophoresis.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | According to manufacturers instructions
| | Sample_hyb_protocol | According to manufacturers instructions
| | Sample_scan_protocol | According to manufacturers instructions
| | Sample_data_processing | RMA normalization (Irizary et al., 2003) using background adjustment, quantile normalization, and median polish as the summarization method
| | Sample_data_processing | Irizarry, R.A., Bolstad, B.M., Collin, F., Cope, L.M., Hobbs, B., Speed T.P. Summaries of Affymetrix GeneChip probe level data. Nucleic Acids Research 31(4): e15 (2003)
| | Sample_platform_id | GPL1261
| | Sample_contact_name | julien,,Ratelade
| | Sample_contact_email | julien.ratelade@inserm.fr
| | Sample_contact_institute | INSERM U574
| | Sample_contact_address | 149 rue de Sèvres
| | Sample_contact_city | Paris
| | Sample_contact_zip/postal_code | 75015
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM458nnn/GSM458147/suppl/GSM458147.CEL.gz
| | Sample_series_id | GSE18358
| | Sample_data_row_count | 45101
| | |
|
GSM458148 | GPL1261 |
|
ki-1122
|
Isolated glomeruli from 27-day-old male knockin FVB/N (backcross N4)
|
tissue: Isolated glomeruli
age: 27-day-old
gender: male
strain: FVB/N (backcross N4)
type: Knockin for the WT1 R394W mutation. Heterozygous for the mutation.
|
According to manufacturers instructions
|
| Sample_geo_accession | GSM458148
| | Sample_status | Public on Oct 02 2009
| | Sample_submission_date | Oct 01 2009
| | Sample_last_update_date | Oct 01 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using the Qiagen's RNeasy Total RNA Isolation kit (Qiagen GmBH, Hilden, Germany), and quality was assessed by agarose-formaldehyde gel electrophoresis.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | According to manufacturers instructions
| | Sample_hyb_protocol | According to manufacturers instructions
| | Sample_scan_protocol | According to manufacturers instructions
| | Sample_data_processing | RMA normalization (Irizary et al., 2003) using background adjustment, quantile normalization, and median polish as the summarization method
| | Sample_data_processing | Irizarry, R.A., Bolstad, B.M., Collin, F., Cope, L.M., Hobbs, B., Speed T.P. Summaries of Affymetrix GeneChip probe level data. Nucleic Acids Research 31(4): e15 (2003)
| | Sample_platform_id | GPL1261
| | Sample_contact_name | julien,,Ratelade
| | Sample_contact_email | julien.ratelade@inserm.fr
| | Sample_contact_institute | INSERM U574
| | Sample_contact_address | 149 rue de Sèvres
| | Sample_contact_city | Paris
| | Sample_contact_zip/postal_code | 75015
| | Sample_contact_country | France
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM458nnn/GSM458148/suppl/GSM458148.CEL.gz
| | Sample_series_id | GSE18358
| | Sample_data_row_count | 45101
| | |
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