Search results for the GEO ID: GSE18746  |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM465515 | GPL1261 |
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GC B cells from pLN
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mouse germinal center B cells from immunized peripheral lymph nodes
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tissues: Adult mouse peripheral lymph nodes
strain: C57BL6/J wild type
cell type: B cells
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from C57BL6/J wild type mice, immunized with TNP-KLH with incomplete Freund's adjuvant
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| Sample_geo_accession | GSM465515
| | Sample_status | Public on Oct 27 2009
| | Sample_submission_date | Oct 26 2009
| | Sample_last_update_date | Oct 26 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Single cell suspensions were prepared from mouse pLN or Peyer's patches, stained with anti-B220,PNA,anti-Fas antibodies, and then purified by using FACS ARIA.
| | Sample_growth_protocol_ch1 | C57BL6/J wild type mice were maintained in specific pathogen-free conditions (SPF) at the animal facility of the Research Center for Allergy and Immunology.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using TRIzol Reagent (Invitrogen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA was subjected to biotinilated cRNA synthesis by using Target Labeling lit (Affymetrix).
| | Sample_hyb_protocol | The labeled cRNA was hybridized with Mouse Genome 430 2.0 Arrays (Affymetrix).
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The image was quantified by using GCOS software.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Keiichiro,,Suzuki
| | Sample_contact_email | suzukike@rcai.riken.jp
| | Sample_contact_phone | +81-45-503-7029
| | Sample_contact_fax | +81-45-503-7027
| | Sample_contact_laboratory | Laboratory for Mucosal Immunity
| | Sample_contact_department | Research Center for Allergy and Immunology
| | Sample_contact_institute | RIKEN
| | Sample_contact_address | 1-7-22 Suehiro-cho, Tsurumi-ku
| | Sample_contact_city | Yokohama
| | Sample_contact_state | Kanagawa
| | Sample_contact_zip/postal_code | 230-0045
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM465nnn/GSM465515/suppl/GSM465515.CEL.gz
| | Sample_series_id | GSE18746
| | Sample_data_row_count | 45101
| | |
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GSM465516 | GPL1261 |
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naive B cells from pLN
|
mouse naive B cells from immunized peripheral lymph nodes
|
tissues: Adult mouse peripheral lymph nodes
strain: C57BL6/J wild type
cell type: B cells
|
from C57BL6/J wild type mice, immunized with TNP-KLH with incomplete Freund's adjuvant
|
| Sample_geo_accession | GSM465516
| | Sample_status | Public on Oct 27 2009
| | Sample_submission_date | Oct 26 2009
| | Sample_last_update_date | Oct 26 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Single cell suspensions were prepared from mouse pLN or Peyer's patches, stained with anti-B220,PNA,anti-Fas antibodies, and then purified by using FACS ARIA.
| | Sample_growth_protocol_ch1 | C57BL6/J wild type mice were maintained in specific pathogen-free conditions (SPF) at the animal facility of the Research Center for Allergy and Immunology.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using TRIzol Reagent (Invitrogen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA was subjected to biotinilated cRNA synthesis by using Target Labeling lit (Affymetrix).
| | Sample_hyb_protocol | The labeled cRNA was hybridized with Mouse Genome 430 2.0 Arrays (Affymetrix).
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The image was quantified by using GCOS software.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Keiichiro,,Suzuki
| | Sample_contact_email | suzukike@rcai.riken.jp
| | Sample_contact_phone | +81-45-503-7029
| | Sample_contact_fax | +81-45-503-7027
| | Sample_contact_laboratory | Laboratory for Mucosal Immunity
| | Sample_contact_department | Research Center for Allergy and Immunology
| | Sample_contact_institute | RIKEN
| | Sample_contact_address | 1-7-22 Suehiro-cho, Tsurumi-ku
| | Sample_contact_city | Yokohama
| | Sample_contact_state | Kanagawa
| | Sample_contact_zip/postal_code | 230-0045
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM465nnn/GSM465516/suppl/GSM465516.CEL.gz
| | Sample_series_id | GSE18746
| | Sample_data_row_count | 45101
| | |
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GSM465517 | GPL1261 |
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GC B cells from PP
|
mouse germinal center B cells from Peyer's patches
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tissues: Adult mouse Peyer's patches
strain: C57BL6/J wild type
cell type: B cells
|
from C57BL6/J wild type mice, without any treatment
|
| Sample_geo_accession | GSM465517
| | Sample_status | Public on Oct 27 2009
| | Sample_submission_date | Oct 26 2009
| | Sample_last_update_date | Oct 26 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Single cell suspensions were prepared from mouse pLN or Peyer's patches, stained with anti-B220,PNA,anti-Fas antibodies, and then purified by using FACS ARIA.
| | Sample_growth_protocol_ch1 | C57BL6/J wild type mice were maintained in specific pathogen-free conditions (SPF) at the animal facility of the Research Center for Allergy and Immunology.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using TRIzol Reagent (Invitrogen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA was subjected to biotinilated cRNA synthesis by using Target Labeling lit (Affymetrix).
| | Sample_hyb_protocol | The labeled cRNA was hybridized with Mouse Genome 430 2.0 Arrays (Affymetrix).
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The image was quantified by using GCOS software.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Keiichiro,,Suzuki
| | Sample_contact_email | suzukike@rcai.riken.jp
| | Sample_contact_phone | +81-45-503-7029
| | Sample_contact_fax | +81-45-503-7027
| | Sample_contact_laboratory | Laboratory for Mucosal Immunity
| | Sample_contact_department | Research Center for Allergy and Immunology
| | Sample_contact_institute | RIKEN
| | Sample_contact_address | 1-7-22 Suehiro-cho, Tsurumi-ku
| | Sample_contact_city | Yokohama
| | Sample_contact_state | Kanagawa
| | Sample_contact_zip/postal_code | 230-0045
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM465nnn/GSM465517/suppl/GSM465517.CEL.gz
| | Sample_series_id | GSE18746
| | Sample_data_row_count | 45101
| | |
|
GSM465518 | GPL1261 |
|
naive B cells from PP
|
mouse naive B cells from Peyer's patches
|
tissues: Adult mouse Peyer's patches
strain: C57BL6/J wild type
cell type: B cells
|
from C57BL6/J wild type mice, without any treatment
|
| Sample_geo_accession | GSM465518
| | Sample_status | Public on Oct 27 2009
| | Sample_submission_date | Oct 26 2009
| | Sample_last_update_date | Oct 26 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Single cell suspensions were prepared from mouse pLN or Peyer's patches, stained with anti-B220,PNA,anti-Fas antibodies, and then purified by using FACS ARIA.
| | Sample_growth_protocol_ch1 | C57BL6/J wild type mice were maintained in specific pathogen-free conditions (SPF) at the animal facility of the Research Center for Allergy and Immunology.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using TRIzol Reagent (Invitrogen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | RNA was subjected to biotinilated cRNA synthesis by using Target Labeling lit (Affymetrix).
| | Sample_hyb_protocol | The labeled cRNA was hybridized with Mouse Genome 430 2.0 Arrays (Affymetrix).
| | Sample_scan_protocol | GeneChips were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The image was quantified by using GCOS software.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Keiichiro,,Suzuki
| | Sample_contact_email | suzukike@rcai.riken.jp
| | Sample_contact_phone | +81-45-503-7029
| | Sample_contact_fax | +81-45-503-7027
| | Sample_contact_laboratory | Laboratory for Mucosal Immunity
| | Sample_contact_department | Research Center for Allergy and Immunology
| | Sample_contact_institute | RIKEN
| | Sample_contact_address | 1-7-22 Suehiro-cho, Tsurumi-ku
| | Sample_contact_city | Yokohama
| | Sample_contact_state | Kanagawa
| | Sample_contact_zip/postal_code | 230-0045
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM465nnn/GSM465518/suppl/GSM465518.CEL.gz
| | Sample_series_id | GSE18746
| | Sample_data_row_count | 45101
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