Search results for the GEO ID: GSE18810  |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM466514 | GPL570 |
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PMN_UTI89_60min_rep1
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PMN_UTI89_60min
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gender: male
cell type: neutrophils
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Gene expresssion data from neutrophils exposed to uropathogenic Escherichia coli strain UTI89 for 60 minutes in RPMI media; replicate 1.
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| Sample_geo_accession | GSM466514
| | Sample_status | Public on Mar 01 2010
| | Sample_submission_date | Oct 29 2009
| | Sample_last_update_date | Oct 29 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Purified human neutrophils were incubated in a 24 well dish for 60 minutes at 37 degrees C and 5% CO2 with or without bacteria at a multiplicity of infection of 10 bacteria per neutrophil.
| | Sample_growth_protocol_ch1 | Neutrophils were purified from the whole blood of healthy adult male and female volunteers and used immediately.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using the Qiagen RNeasy mini kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Chips labeled with biotin according to Manufacturer's protocol
| | Sample_hyb_protocol | Chips hybridized according to Manufacturer's protocol
| | Sample_scan_protocol | GS3000
| | Sample_data_processing | Data corrected to 1500 Baseline
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rekha,,Meyer
| | Sample_contact_email | rmeyer@pathbox.wustl.edu
| | Sample_contact_phone | 314 362 8853
| | Sample_contact_institute | Washington University School of Medicine
| | Sample_contact_address | 4320 Forest Park Av
| | Sample_contact_city | St Louis
| | Sample_contact_state | MO
| | Sample_contact_zip/postal_code | 63128
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM466nnn/GSM466514/suppl/GSM466514.CEL.gz
| | Sample_series_id | GSE18810
| | Sample_data_row_count | 54675
| | |
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GSM466515 | GPL570 |
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PMN_UTI89_60min_rep2
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PMN_UTI89_60min
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gender: female
cell type: neutrophils
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Gene expresssion data from neutrophils exposed to uropathogenic Escherichia coli strain UTI89 for 60 minutes in RPMI media; replicate 2.
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| Sample_geo_accession | GSM466515
| | Sample_status | Public on Mar 01 2010
| | Sample_submission_date | Oct 29 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Purified human neutrophils were incubated in a 24 well dish for 60 minutes at 37 degrees C and 5% CO2 with or without bacteria at a multiplicity of infection of 10 bacteria per neutrophil.
| | Sample_growth_protocol_ch1 | Neutrophils were purified from the whole blood of healthy adult male and female volunteers and used immediately.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using the Qiagen RNeasy mini kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Chips labeled with biotin according to Manufacturer's protocol
| | Sample_hyb_protocol | Chips hybridized according to Manufacturer's protocol
| | Sample_scan_protocol | GS3000
| | Sample_data_processing | Data corrected to 1500 Baseline
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rekha,,Meyer
| | Sample_contact_email | rmeyer@pathbox.wustl.edu
| | Sample_contact_phone | 314 362 8853
| | Sample_contact_institute | Washington University School of Medicine
| | Sample_contact_address | 4320 Forest Park Av
| | Sample_contact_city | St Louis
| | Sample_contact_state | MO
| | Sample_contact_zip/postal_code | 63128
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM466nnn/GSM466515/suppl/GSM466515.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE18810
| | Sample_data_row_count | 54675
| | |
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GSM466516 | GPL570 |
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PMN_MG1655_60min_rep1
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PMN_MG1655_60min
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gender: male
cell type: neutrophils
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Gene expression data from neutrophils exposed to commensal Escherichia coli strain MG1655 for 60 minutes in RPMI media; replicate 1.
|
| Sample_geo_accession | GSM466516
| | Sample_status | Public on Mar 01 2010
| | Sample_submission_date | Oct 29 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Purified human neutrophils were incubated in a 24 well dish for 60 minutes at 37 degrees C and 5% CO2 with or without bacteria at a multiplicity of infection of 10 bacteria per neutrophil.
| | Sample_growth_protocol_ch1 | Neutrophils were purified from the whole blood of healthy adult male and female volunteers and used immediately.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using the Qiagen RNeasy mini kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Chips labeled with biotin according to Manufacturer's protocol
| | Sample_hyb_protocol | Chips hybridized according to Manufacturer's protocol
| | Sample_scan_protocol | GS3000
| | Sample_data_processing | Data corrected to 1500 Baseline
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rekha,,Meyer
| | Sample_contact_email | rmeyer@pathbox.wustl.edu
| | Sample_contact_phone | 314 362 8853
| | Sample_contact_institute | Washington University School of Medicine
| | Sample_contact_address | 4320 Forest Park Av
| | Sample_contact_city | St Louis
| | Sample_contact_state | MO
| | Sample_contact_zip/postal_code | 63128
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM466nnn/GSM466516/suppl/GSM466516.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE18810
| | Sample_data_row_count | 54675
| | |
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GSM466517 | GPL570 |
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PMN_MG1655_60min_rep2
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PMN_MG1655_60min
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gender: female
cell type: neutrophils
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Gene expression data from neutrophils exposed to commensal Escherichia coli strain MG1655 for 60 minutes in RPMI media; replicate 2.
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| Sample_geo_accession | GSM466517
| | Sample_status | Public on Mar 01 2010
| | Sample_submission_date | Oct 29 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Purified human neutrophils were incubated in a 24 well dish for 60 minutes at 37 degrees C and 5% CO2 with or without bacteria at a multiplicity of infection of 10 bacteria per neutrophil.
| | Sample_growth_protocol_ch1 | Neutrophils were purified from the whole blood of healthy adult male and female volunteers and used immediately.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using the Qiagen RNeasy mini kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Chips labeled with biotin according to Manufacturer's protocol
| | Sample_hyb_protocol | Chips hybridized according to Manufacturer's protocol
| | Sample_scan_protocol | GS3000
| | Sample_data_processing | Data corrected to 1500 Baseline
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rekha,,Meyer
| | Sample_contact_email | rmeyer@pathbox.wustl.edu
| | Sample_contact_phone | 314 362 8853
| | Sample_contact_institute | Washington University School of Medicine
| | Sample_contact_address | 4320 Forest Park Av
| | Sample_contact_city | St Louis
| | Sample_contact_state | MO
| | Sample_contact_zip/postal_code | 63128
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM466nnn/GSM466517/suppl/GSM466517.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE18810
| | Sample_data_row_count | 54675
| | |
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GSM466518 | GPL570 |
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PMN_mock_60min_rep1
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PMN_mock_60min
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gender: male
cell type: neutrophils
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Gene expression data from neutrophils exposed to RPMI media only for 60 minutes; replicate 1.
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| Sample_geo_accession | GSM466518
| | Sample_status | Public on Mar 01 2010
| | Sample_submission_date | Oct 29 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Purified human neutrophils were incubated in a 24 well dish for 60 minutes at 37 degrees C and 5% CO2 with or without bacteria at a multiplicity of infection of 10 bacteria per neutrophil.
| | Sample_growth_protocol_ch1 | Neutrophils were purified from the whole blood of healthy adult male and female volunteers and used immediately.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using the Qiagen RNeasy mini kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Chips labeled with biotin according to Manufacturer's protocol
| | Sample_hyb_protocol | Chips hybridized according to Manufacturer's protocol
| | Sample_scan_protocol | GS3000
| | Sample_data_processing | Data corrected to 1500 Baseline
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rekha,,Meyer
| | Sample_contact_email | rmeyer@pathbox.wustl.edu
| | Sample_contact_phone | 314 362 8853
| | Sample_contact_institute | Washington University School of Medicine
| | Sample_contact_address | 4320 Forest Park Av
| | Sample_contact_city | St Louis
| | Sample_contact_state | MO
| | Sample_contact_zip/postal_code | 63128
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM466nnn/GSM466518/suppl/GSM466518.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE18810
| | Sample_data_row_count | 54675
| | |
|
GSM466519 | GPL570 |
|
PMN_mock_60min_rep2
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PMN_mock_60min
|
gender: female
cell type: neutrophils
|
Gene expression data from neutrophils exposed to RPMI media only for 60 minutes; replicate 2.
|
| Sample_geo_accession | GSM466519
| | Sample_status | Public on Mar 01 2010
| | Sample_submission_date | Oct 29 2009
| | Sample_last_update_date | Aug 15 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | Purified human neutrophils were incubated in a 24 well dish for 60 minutes at 37 degrees C and 5% CO2 with or without bacteria at a multiplicity of infection of 10 bacteria per neutrophil.
| | Sample_growth_protocol_ch1 | Neutrophils were purified from the whole blood of healthy adult male and female volunteers and used immediately.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using the Qiagen RNeasy mini kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Chips labeled with biotin according to Manufacturer's protocol
| | Sample_hyb_protocol | Chips hybridized according to Manufacturer's protocol
| | Sample_scan_protocol | GS3000
| | Sample_data_processing | Data corrected to 1500 Baseline
| | Sample_platform_id | GPL570
| | Sample_contact_name | Rekha,,Meyer
| | Sample_contact_email | rmeyer@pathbox.wustl.edu
| | Sample_contact_phone | 314 362 8853
| | Sample_contact_institute | Washington University School of Medicine
| | Sample_contact_address | 4320 Forest Park Av
| | Sample_contact_city | St Louis
| | Sample_contact_state | MO
| | Sample_contact_zip/postal_code | 63128
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM466nnn/GSM466519/suppl/GSM466519.CEL.gz
| | Sample_relation | Reanalyzed by: GSE49910
| | Sample_series_id | GSE18810
| | Sample_data_row_count | 54675
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