Search results for the GEO ID: GSE18947  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM469260 | GPL570 |
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low metastatic potential cell subline of Sosp-9607, biological rep1
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Human osteosarcoma cell subline with low pulmonary metastasis potential
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cell line: Sosp-9607
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low metastatic potential cell subline of Sosp-9607, biological rep1
|
| Sample_geo_accession | GSM469260
| | Sample_status | Public on Nov 10 2009
| | Sample_submission_date | Nov 09 2009
| | Sample_last_update_date | Nov 11 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | All the cell lines were maintained in complete RPMI 1640 medium (HyClone) supplemented with 10% fetal calf serum (FCS) (Sijiqing Co.) at 37°C under 5% CO2 atmosphere.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Hybridization Oven 640. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with GeneChip Operating Software (GCOS 1.4) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | xiang,,chen
| | Sample_contact_institute | Tangdu Hospital
| | Sample_contact_address | Xinsi Rd
| | Sample_contact_city | Xi'an
| | Sample_contact_zip/postal_code | +86710038
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM469nnn/GSM469260/suppl/GSM469260.CEL.gz
| | Sample_series_id | GSE18947
| | Sample_data_row_count | 54675
| | |
|
GSM469261 | GPL570 |
|
low metastatic potential cell subline of Sosp-9607, biological rep2
|
Human osteosarcoma cell subline with low pulmonary metastasis potential
|
cell line: Sosp-9607
|
low metastatic potential cell subline of Sosp-9607, biological rep2
|
| Sample_geo_accession | GSM469261
| | Sample_status | Public on Nov 10 2009
| | Sample_submission_date | Nov 09 2009
| | Sample_last_update_date | Nov 11 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | All the cell lines were maintained in complete RPMI 1640 medium (HyClone) supplemented with 10% fetal calf serum (FCS) (Sijiqing Co.) at 37°C under 5% CO2 atmosphere.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Hybridization Oven 640. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with GeneChip Operating Software (GCOS 1.4) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | xiang,,chen
| | Sample_contact_institute | Tangdu Hospital
| | Sample_contact_address | Xinsi Rd
| | Sample_contact_city | Xi'an
| | Sample_contact_zip/postal_code | +86710038
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM469nnn/GSM469261/suppl/GSM469261.CEL.gz
| | Sample_series_id | GSE18947
| | Sample_data_row_count | 54675
| | |
|
GSM469262 | GPL570 |
|
high metastatic potential cell subline of Sosp-9607, biological rep1
|
Human osteosarcoma cell subline with high pulmonary metastasis potential
|
cell line: Sosp-9607
|
high metastatic potential cell subline of Sosp-9607, biological rep1
|
| Sample_geo_accession | GSM469262
| | Sample_status | Public on Nov 10 2009
| | Sample_submission_date | Nov 09 2009
| | Sample_last_update_date | Nov 11 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | All the cell lines were maintained in complete RPMI 1640 medium (HyClone) supplemented with 10% fetal calf serum (FCS) (Sijiqing Co.) at 37°C under 5% CO2 atmosphere.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Hybridization Oven 640. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with GeneChip Operating Software (GCOS 1.4) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | xiang,,chen
| | Sample_contact_institute | Tangdu Hospital
| | Sample_contact_address | Xinsi Rd
| | Sample_contact_city | Xi'an
| | Sample_contact_zip/postal_code | +86710038
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM469nnn/GSM469262/suppl/GSM469262.CEL.gz
| | Sample_series_id | GSE18947
| | Sample_data_row_count | 54675
| | |
|
GSM469263 | GPL570 |
|
high metastatic potential cell subline of Sosp-9607, biological rep2
|
Human osteosarcoma cell subline with high pulmonary metastasis potential
|
cell line: Sosp-9607
|
high metastatic potential cell subline of Sosp-9607, biological rep2
|
| Sample_geo_accession | GSM469263
| | Sample_status | Public on Nov 10 2009
| | Sample_submission_date | Nov 09 2009
| | Sample_last_update_date | Nov 11 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | All the cell lines were maintained in complete RPMI 1640 medium (HyClone) supplemented with 10% fetal calf serum (FCS) (Sijiqing Co.) at 37°C under 5% CO2 atmosphere.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Hybridization Oven 640. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with GeneChip Operating Software (GCOS 1.4) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | xiang,,chen
| | Sample_contact_institute | Tangdu Hospital
| | Sample_contact_address | Xinsi Rd
| | Sample_contact_city | Xi'an
| | Sample_contact_zip/postal_code | +86710038
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM469nnn/GSM469263/suppl/GSM469263.CEL.gz
| | Sample_series_id | GSE18947
| | Sample_data_row_count | 54675
| | |
|
GSM469264 | GPL570 |
|
low metastatic potential cell subline of Saos-2
|
Human osteosarcoma cell subline with low pulmonary metastasis potential
|
cell line: Saos-2
|
low metastatic potential cell subline of Saos-2
|
| Sample_geo_accession | GSM469264
| | Sample_status | Public on Nov 10 2009
| | Sample_submission_date | Nov 09 2009
| | Sample_last_update_date | Nov 11 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | All the cell lines were maintained in complete RPMI 1640 medium (HyClone) supplemented with 10% fetal calf serum (FCS) (Sijiqing Co.) at 37°C under 5% CO2 atmosphere.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Hybridization Oven 640. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with GeneChip Operating Software (GCOS 1.4) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | xiang,,chen
| | Sample_contact_institute | Tangdu Hospital
| | Sample_contact_address | Xinsi Rd
| | Sample_contact_city | Xi'an
| | Sample_contact_zip/postal_code | +86710038
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM469nnn/GSM469264/suppl/GSM469264.CEL.gz
| | Sample_series_id | GSE18947
| | Sample_data_row_count | 54675
| | |
|
GSM469265 | GPL570 |
|
high metastatic potential cell subline of Saos-2
|
Human osteosarcoma cell subline with high pulmonary metastasis potential
|
cell line: Saos-2
|
high metastatic potential cell subline of Saos-2
|
| Sample_geo_accession | GSM469265
| | Sample_status | Public on Nov 10 2009
| | Sample_submission_date | Nov 09 2009
| | Sample_last_update_date | Nov 11 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | All the cell lines were maintained in complete RPMI 1640 medium (HyClone) supplemented with 10% fetal calf serum (FCS) (Sijiqing Co.) at 37°C under 5% CO2 atmosphere.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix Hybridization Oven 640. GeneChips were washed and stained in the Affymetrix Fluidics Station 450.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with GeneChip Operating Software (GCOS 1.4) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL570
| | Sample_contact_name | xiang,,chen
| | Sample_contact_institute | Tangdu Hospital
| | Sample_contact_address | Xinsi Rd
| | Sample_contact_city | Xi'an
| | Sample_contact_zip/postal_code | +86710038
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM469nnn/GSM469265/suppl/GSM469265.CEL.gz
| | Sample_series_id | GSE18947
| | Sample_data_row_count | 54675
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