Search results for the GEO ID: GSE19204  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM476005 | GPL1261 |
|
control_0412-7
|
SPC(+)Cre(-), Dox E6.5-12.5, PN15; control
|
tissue: whole lung
strain: SPC(+)Cre(-), Dox E6.5-12.5, PN15
genotype/variation: wildtype, control
|
SPC(+)Cre(-), Dox E6.5-12.5, PN15; control
|
| Sample_geo_accession | GSM476005
| | Sample_status | Public on Feb 25 2010
| | Sample_submission_date | Nov 25 2009
| | Sample_last_update_date | Feb 25 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Whole lung total RNA was purified by RNeasy Mini Kit according to the manufacturers protocol (Cat. 74104, Qiagen, Valencia, CA).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | based on Affymetrix protocols
| | Sample_hyb_protocol | The cRNA was then hybridized to the murine genome MOE430 (consists of ≈ 45000 gene entries) chips (Affymetrix, Santa Clara, CA) according to the manufacturer’s protocol.
| | Sample_scan_protocol | Affymetrix Microarray Suite 5.0 was used to scan and quantitate the gene chips under default scan settings.
| | Sample_data_processing | data processed/normalized by algorithm:RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Yan,,Xu
| | Sample_contact_email | yan.xu@cchmc.org
| | Sample_contact_phone | 513-6368921
| | Sample_contact_fax | 513-6367868
| | Sample_contact_institute | Cincinnati Children's Hospital Medical Center
| | Sample_contact_address | 3333 Burnet Ave
| | Sample_contact_city | Cincinnati
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 45229
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM476nnn/GSM476005/suppl/GSM476005.CEL.gz
| | Sample_series_id | GSE19204
| | Sample_data_row_count | 45101
| | |
|
GSM476007 | GPL1261 |
|
control_0525-1
|
SPC(+)Cre(-), Dox E6.5-12.5, PN15; control
|
tissue: whole lung
strain: SPC(+)Cre(-), Dox E6.5-12.5, PN15
genotype/variation: wildtype, control
|
SPC(+)Cre(-), Dox E6.5-12.5, PN15; control
|
| Sample_geo_accession | GSM476007
| | Sample_status | Public on Feb 25 2010
| | Sample_submission_date | Nov 25 2009
| | Sample_last_update_date | Feb 25 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Whole lung total RNA was purified by RNeasy Mini Kit according to the manufacturers protocol (Cat. 74104, Qiagen, Valencia, CA).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | based on Affymetrix protocols
| | Sample_hyb_protocol | The cRNA was then hybridized to the murine genome MOE430 (consists of ≈ 45000 gene entries) chips (Affymetrix, Santa Clara, CA) according to the manufacturer’s protocol.
| | Sample_scan_protocol | Affymetrix Microarray Suite 5.0 was used to scan and quantitate the gene chips under default scan settings.
| | Sample_data_processing | data processed/normalized by algorithm:RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Yan,,Xu
| | Sample_contact_email | yan.xu@cchmc.org
| | Sample_contact_phone | 513-6368921
| | Sample_contact_fax | 513-6367868
| | Sample_contact_institute | Cincinnati Children's Hospital Medical Center
| | Sample_contact_address | 3333 Burnet Ave
| | Sample_contact_city | Cincinnati
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 45229
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM476nnn/GSM476007/suppl/GSM476007.CEL.gz
| | Sample_series_id | GSE19204
| | Sample_data_row_count | 45101
| | |
|
GSM476008 | GPL1261 |
|
control_0530-1
|
SPC(+)Cre(-), Dox E6.5-12.5, PN15; control
|
tissue: whole lung
strain: SPC(+)Cre(-), Dox E6.5-12.5, PN15
genotype/variation: wildtype, control
|
SPC(+)Cre(-), Dox E6.5-12.5, PN15; control
|
| Sample_geo_accession | GSM476008
| | Sample_status | Public on Feb 25 2010
| | Sample_submission_date | Nov 25 2009
| | Sample_last_update_date | Feb 25 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Whole lung total RNA was purified by RNeasy Mini Kit according to the manufacturers protocol (Cat. 74104, Qiagen, Valencia, CA).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | based on Affymetrix protocols
| | Sample_hyb_protocol | The cRNA was then hybridized to the murine genome MOE430 (consists of ≈ 45000 gene entries) chips (Affymetrix, Santa Clara, CA) according to the manufacturer’s protocol.
| | Sample_scan_protocol | Affymetrix Microarray Suite 5.0 was used to scan and quantitate the gene chips under default scan settings.
| | Sample_data_processing | data processed/normalized by algorithm:RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Yan,,Xu
| | Sample_contact_email | yan.xu@cchmc.org
| | Sample_contact_phone | 513-6368921
| | Sample_contact_fax | 513-6367868
| | Sample_contact_institute | Cincinnati Children's Hospital Medical Center
| | Sample_contact_address | 3333 Burnet Ave
| | Sample_contact_city | Cincinnati
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 45229
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM476nnn/GSM476008/suppl/GSM476008.CEL.gz
| | Sample_series_id | GSE19204
| | Sample_data_row_count | 45101
| | |
|
GSM476009 | GPL1261 |
|
KO_0424-2
|
SPC(+)Cre(-), Dox E6.5-12.5, PN15; knockout
|
tissue: whole lung
strain: SPC(+)Cre(-), Dox E6.5-12.5, PN15
genotype/variation: Foxa2-/-
|
SPC(+)Cre(-), Dox E6.5-12.5, PN15; knockout
|
| Sample_geo_accession | GSM476009
| | Sample_status | Public on Feb 25 2010
| | Sample_submission_date | Nov 25 2009
| | Sample_last_update_date | Feb 25 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Whole lung total RNA was purified by RNeasy Mini Kit according to the manufacturers protocol (Cat. 74104, Qiagen, Valencia, CA).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | based on Affymetrix protocols
| | Sample_hyb_protocol | The cRNA was then hybridized to the murine genome MOE430 (consists of ≈ 45000 gene entries) chips (Affymetrix, Santa Clara, CA) according to the manufacturer’s protocol.
| | Sample_scan_protocol | Affymetrix Microarray Suite 5.0 was used to scan and quantitate the gene chips under default scan settings.
| | Sample_data_processing | data processed/normalized by algorithm:RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Yan,,Xu
| | Sample_contact_email | yan.xu@cchmc.org
| | Sample_contact_phone | 513-6368921
| | Sample_contact_fax | 513-6367868
| | Sample_contact_institute | Cincinnati Children's Hospital Medical Center
| | Sample_contact_address | 3333 Burnet Ave
| | Sample_contact_city | Cincinnati
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 45229
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM476nnn/GSM476009/suppl/GSM476009.CEL.gz
| | Sample_series_id | GSE19204
| | Sample_data_row_count | 45101
| | |
|
GSM476010 | GPL1261 |
|
KO_0525-2
|
SPC(+)Cre(-), Dox E6.5-12.5, PN15; knockout
|
tissue: whole lung
strain: SPC(+)Cre(-), Dox E6.5-12.5, PN15
genotype/variation: Foxa2-/-
|
SPC(+)Cre(-), Dox E6.5-12.5, PN15; knockout
|
| Sample_geo_accession | GSM476010
| | Sample_status | Public on Feb 25 2010
| | Sample_submission_date | Nov 25 2009
| | Sample_last_update_date | Feb 25 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Whole lung total RNA was purified by RNeasy Mini Kit according to the manufacturers protocol (Cat. 74104, Qiagen, Valencia, CA).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | based on Affymetrix protocols
| | Sample_hyb_protocol | The cRNA was then hybridized to the murine genome MOE430 (consists of ≈ 45000 gene entries) chips (Affymetrix, Santa Clara, CA) according to the manufacturer’s protocol.
| | Sample_scan_protocol | Affymetrix Microarray Suite 5.0 was used to scan and quantitate the gene chips under default scan settings.
| | Sample_data_processing | data processed/normalized by algorithm:RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Yan,,Xu
| | Sample_contact_email | yan.xu@cchmc.org
| | Sample_contact_phone | 513-6368921
| | Sample_contact_fax | 513-6367868
| | Sample_contact_institute | Cincinnati Children's Hospital Medical Center
| | Sample_contact_address | 3333 Burnet Ave
| | Sample_contact_city | Cincinnati
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 45229
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM476nnn/GSM476010/suppl/GSM476010.CEL.gz
| | Sample_series_id | GSE19204
| | Sample_data_row_count | 45101
| | |
|
GSM476011 | GPL1261 |
|
KO_0525-3
|
SPC(+)Cre(-), Dox E6.5-12.5, PN15; knockout
|
tissue: whole lung
strain: SPC(+)Cre(-), Dox E6.5-12.5, PN15
genotype/variation: Foxa2-/-
|
SPC(+)Cre(-), Dox E6.5-12.5, PN15; knockout
|
| Sample_geo_accession | GSM476011
| | Sample_status | Public on Feb 25 2010
| | Sample_submission_date | Nov 25 2009
| | Sample_last_update_date | Feb 25 2010
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Whole lung total RNA was purified by RNeasy Mini Kit according to the manufacturers protocol (Cat. 74104, Qiagen, Valencia, CA).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | based on Affymetrix protocols
| | Sample_hyb_protocol | The cRNA was then hybridized to the murine genome MOE430 (consists of ≈ 45000 gene entries) chips (Affymetrix, Santa Clara, CA) according to the manufacturer’s protocol.
| | Sample_scan_protocol | Affymetrix Microarray Suite 5.0 was used to scan and quantitate the gene chips under default scan settings.
| | Sample_data_processing | data processed/normalized by algorithm:RMA
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Yan,,Xu
| | Sample_contact_email | yan.xu@cchmc.org
| | Sample_contact_phone | 513-6368921
| | Sample_contact_fax | 513-6367868
| | Sample_contact_institute | Cincinnati Children's Hospital Medical Center
| | Sample_contact_address | 3333 Burnet Ave
| | Sample_contact_city | Cincinnati
| | Sample_contact_state | OH
| | Sample_contact_zip/postal_code | 45229
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM476nnn/GSM476011/suppl/GSM476011.CEL.gz
| | Sample_series_id | GSE19204
| | Sample_data_row_count | 45101
| | |
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