Search results for the GEO ID: GSE19251  |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM477805 | GPL1261 |
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KKTa_isolated glomeruli_HFD
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KKTa, isolated glomeruli
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strain: KKTa
gender: male
age: 20 weeks
diet: high-fat diet
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Mice fed with a high-fat diet.
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| Sample_geo_accession | GSM477805
| | Sample_status | Public on Dec 01 2010
| | Sample_submission_date | Dec 02 2009
| | Sample_last_update_date | Dec 02 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using Qiagen RNeasy Mini Kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Total RNA was converted to cDNA using Superscript 2 reverse transcriptase, and biotin-labeled cRNA was synthesized from the cDNA by in vitro transcription as described (Two-cycle Target Labeling and Control Reagents, Affymetrix)
| | Sample_hyb_protocol | Twenty ug fragmented cRNA was hybridized with GeneChip Mouse Genome 430 2.0 Array (Affymetrix) at 45 C for 16h.
| | Sample_scan_protocol | The chips were washed, stained with srteptavidin phycoerythrin and scanned using a GeneChip Scanner 3000 (Affymetrix).
| | Sample_data_processing | Scanned images were converted to signal intensity using GeneChip Operating software (Affymetrix).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Maki,,Murakoshi
| | Sample_contact_email | maki-m@juntendo.ac.jp
| | Sample_contact_phone | 81-3-5802-1064
| | Sample_contact_department | Division of Nephrology, Department of Internal Medicine
| | Sample_contact_institute | Juntendo University School of Medicine
| | Sample_contact_address | 2-1-1, Hongo, Bunkyo-ku
| | Sample_contact_city | Tokyo
| | Sample_contact_zip/postal_code | 113-8421
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM477nnn/GSM477805/suppl/GSM477805.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM477nnn/GSM477805/suppl/GSM477805.CHP.gz
| | Sample_series_id | GSE19251
| | Sample_data_row_count | 45101
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GSM477806 | GPL1261 |
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KKTa_isolated glomeruli_Chow
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KKTa, isolated glomeruli
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strain: KKTa
gender: male
age: 20 weeks
diet: normal fat diet
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Mice fed with a normal chow diet.
|
| Sample_geo_accession | GSM477806
| | Sample_status | Public on Dec 01 2010
| | Sample_submission_date | Dec 02 2009
| | Sample_last_update_date | Dec 02 2009
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated using Qiagen RNeasy Mini Kit.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Total RNA was converted to cDNA using Superscript 2 reverse transcriptase, and biotin-labeled cRNA was synthesized from the cDNA by in vitro transcription as described (Two-cycle Target Labeling and Control Reagents, Affymetrix)
| | Sample_hyb_protocol | Twenty ug fragmented cRNA was hybridized with GeneChip Mouse Genome 430 2.0 Array (Affymetrix) at 45 C for 16h.
| | Sample_scan_protocol | The chips were washed, stained with srteptavidin phycoerythrin and scanned using a GeneChip Scanner 3000 (Affymetrix).
| | Sample_data_processing | Scanned images were converted to signal intensity using GeneChip Operating software (Affymetrix).
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Maki,,Murakoshi
| | Sample_contact_email | maki-m@juntendo.ac.jp
| | Sample_contact_phone | 81-3-5802-1064
| | Sample_contact_department | Division of Nephrology, Department of Internal Medicine
| | Sample_contact_institute | Juntendo University School of Medicine
| | Sample_contact_address | 2-1-1, Hongo, Bunkyo-ku
| | Sample_contact_city | Tokyo
| | Sample_contact_zip/postal_code | 113-8421
| | Sample_contact_country | Japan
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM477nnn/GSM477806/suppl/GSM477806.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM477nnn/GSM477806/suppl/GSM477806.CHP.gz
| | Sample_series_id | GSE19251
| | Sample_data_row_count | 45101
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